 |
PDBsum entry 3keh
|
|
|
|
 |
Contents |
 |
|
|
|
|
|
|
|
|
|
|
|
* Residue conservation analysis
|
|
|
|
|
PDB id:
|
 |
|
 |
| Name: |
 |
Hydrolase
|
 |
|
Title:
|
 |
Crystal structure of n370s glucocerebrosidase mutant at ph 7.4
|
|
Structure:
|
 |
Glucocerebrosidase. Chain: a, b. Synonym: beta-glucocerebrosidase, acid beta-glucosidase, d-glucosyl- n-acylsphingosine glucohydrolase, alglucerase, imiglucerase. Engineered: yes. Mutation: yes
|
|
Source:
|
 |
Homo sapiens. Human. Organism_taxid: 9606. Gene: gba, gc, gluc. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108
|
|
Resolution:
|
 |
|
2.80Å
|
R-factor:
|
0.215
|
R-free:
|
0.273
|
|
|
Authors:
|
 |
R.R.Wei,S.Boucher,C.Q.Pan,T.Edmunds
|
|
Key ref:
|
 |
R.R.Wei
et al.
Crystal structure of glucocerebrosidase containing th mutation: implication on chaperon therapy.
To be published,
.
|
 |
|
Date:
|
 |
|
26-Oct-09
|
Release date:
|
27-Oct-10
|
|
|
|
|
|
PROCHECK
|
|
|
|
|
Headers
|
 |
|
|
References
|
|
|
|
|
|
|
P04062
(GLCM_HUMAN) -
Lysosomal acid glucosylceramidase from Homo sapiens
|
|
|
|
Seq: Struc:
|
 |
 |
 |
536 a.a.
497 a.a.*
|
|
|
|
|
|
|
|
|
 |
 |
|
|
Key: |
 |
 |
Secondary structure |
 |
 |
CATH domain |
 |
|
*
PDB and UniProt seqs differ
at 1 residue position (black
cross)
|
|
|
|
|
 |
|
|
 |
 |
 |
 |
Enzyme class 2:
|
 |
E.C.2.4.1.-
- ?????
|
|
 |
 |
 |
 |
 |
Enzyme class 3:
|
 |
E.C.3.2.1.-
- ?????
|
|
 |
 |
 |
 |
 |
Enzyme class 4:
|
 |
E.C.3.2.1.45
- glucosylceramidase.
|
|
 |
 |
 |
 |
 |
Reaction:
|
 |
a beta-D-glucosyl-(1<->1')-N-acylsphing-4-enine + H2O = an N-acylsphing- 4-enine + D-glucose
|
 |
 |
 |
 |
 |
beta-D-glucosyl-(1<->1')-N-acylsphing-4-enine
|
+
|
H2O
|
=
|
N-acylsphing- 4-enine
|
+
|
D-glucose
Bound ligand (Het Group name = )
matches with 62.50% similarity
|
|
 |
 |
 |
 |
 |
 |
 |
 |
Enzyme class 5:
|
 |
E.C.3.2.1.46
- galactosylceramidase.
|
|
 |
 |
 |
 |
 |
Reaction:
|
 |
a beta-D-galactosyl-(1<->1')-N-acylsphing-4-enine + H2O = an N-acylsphing-4-enine + D-galactose
|
 |
 |
 |
 |
 |
beta-D-galactosyl-(1<->1')-N-acylsphing-4-enine
|
+
|
H2O
|
=
|
N-acylsphing-4-enine
|
+
|
D-galactose
Bound ligand (Het Group name = )
matches with 62.50% similarity
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
Note, where more than one E.C. class is given (as above), each may
correspond to a different protein domain or, in the case of polyprotein
precursors, to a different mature protein.
|
|
 |
|
Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
|
|
 |
');
}
}
 |