spacer
spacer

PDBsum entry 3imh

Go to PDB code: 
protein ligands metals Protein-protein interface(s) links
Isomerase PDB id
3imh

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chains
332 a.a. *
Ligands
GOL ×8
Metals
_CL ×3
_MG ×3
Waters ×998
* Residue conservation analysis
PDB id:
3imh
Name: Isomerase
Title: Crystal structure of galactose 1-epimerase from lactobacillus acidophilus ncfm
Structure: Galactose-1-epimerase. Chain: a, b. Engineered: yes. Mutation: yes
Source: Lactobacillus acidophilus. Organism_taxid: 272621. Strain: ncfm. Gene: galm, lba1457. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
1.76Å     R-factor:   0.141     R-free:   0.170
Authors: Y.Patskovsky,R.Toro,M.Dickey,S.Chang,J.M.Sauder,S.K.Burley,S.C.Almo, New York Sgx Research Center For Structural Genomics (Nysgxrc)
Key ref: Y.Patskovsky et al. Crystal structure of galactose 1-Epimerase from lactobacillus acidophilus. To be published, .
Date:
10-Aug-09     Release date:   18-Aug-09    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q5FJ46  (Q5FJ46_LACAC) -  Galactose-1-epimerase from Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM)
Seq:
Struc:
328 a.a.
332 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 2 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.5.1.3.3  - aldose 1-epimerase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: alpha-D-glucose = beta-D-glucose
alpha-D-glucose
Bound ligand (Het Group name = GOL)
matches with 50.00% similarity
= beta-D-glucose
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

spacer

spacer