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PDBsum entry 3ilo

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protein ligands metals links
Transferase PDB id
3ilo

 

 

 

 

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Contents
Protein chain
158 a.a. *
Ligands
APC
PH2
ACT
Metals
_MG
_CL
Waters ×385
* Residue conservation analysis
PDB id:
3ilo
Name: Transferase
Title: Crystal structure of e. Coli hppk(d97a) in complex with mgampcpp and 6-hydroxymethyl-7,8-dihydropterin
Structure: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. Chain: a. Synonym: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, hppk, 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, pppk. Engineered: yes. Mutation: yes
Source: Escherichia coli. Organism_taxid: 83333. Strain: k-12. Gene: b0142, foik, folk, jw0138. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
1.10Å     R-factor:   0.143     R-free:   0.160
Authors: J.Blaszczyk,Y.Li,H.Yan,X.Ji
Key ref: Y.Li et al. Structural and functional roles of residues d95 and d e. Coli hppk. To be published, .
Date:
07-Aug-09     Release date:   11-Aug-10    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
P26281  (HPPK_ECOLI) -  2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase from Escherichia coli (strain K12)
Seq:
Struc:
159 a.a.
158 a.a.*
Key:    Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.2.7.6.3  - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

      Pathway:
Folate Biosynthesis (late stages)
      Reaction: 6-hydroxymethyl-7,8-dihydropterin + ATP = (7,8-dihydropterin-6-yl)methyl diphosphate + AMP + H+
6-hydroxymethyl-7,8-dihydropterin
+ ATP
= (7,8-dihydropterin-6-yl)methyl diphosphate
+
AMP
Bound ligand (Het Group name = APC)
matches with 68.75% similarity
+ H(+)
      Cofactor: Mg(2+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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