PDBsum entry 3h7c

Hydrolase

PDB id: 3h7c

Contents

Protein chain

369 a.a. *

Ligands

211

1PE

Metals

_CL ×2

_MG

_NA ×2

__K

Waters ×372

* Residue conservation analysis

PDB id:

3h7c

Name:

Hydrolase

Title:

Crystal structure of arabidopsis thaliana agmatine deiminase from cell free expression

Structure:

Agmatine deiminase. Chain: x. Synonym: agmatine iminohydrolase, protein embryo defective 1873. Engineered: yes

Source:

Arabidopsis thaliana. Mouse-ear cress,thale-cress. Organism_taxid: 3702. Strain: columbia. Gene: aih, at5g08170, emb1873, t22d6.110. Expressed in: cell-free synthesis. Other_details: wheat germ

Resolution:

1.50Å R-factor: 0.147 R-free: 0.174

Authors:

E.S.Burgie,C.A.Bingman,G.N.Phillips Jr.,Center For Eukaryotic Structural Genomics (Cesg)

Key ref:

E.S.Burgie et al. Structural insights into the catalytic mechanism of arabidopsis thaliana agmatine deiminase. To be published, .

Date:

24-Apr-09 Release date: 26-May-09

Protein chain

Q8GWW7  (AGUA_ARATH) -  Agmatine deiminase from Arabidopsis thaliana

Seq: 383 a.a.

Struc: 369 a.a.*

* PDB and UniProt seqs differ at 2 residue positions (black crosses)

Enzyme reactions

• Enzyme class: E.C.3.5.3.12 - agmatine deiminase.
• Reaction: agmatine + H2O = N-carbamoylputrescine + NH4⁺

Molecule diagrams generated from .mol files obtained from the KEGG ftp site