 |
PDBsum entry 3h0x
|
|
|
|
 |
Contents |
 |
|
|
|
|
|
|
|
|
|
* Residue conservation analysis
|
|
|
|
|
PDB id:
|
 |
|
 |
| Name: |
 |
Chaperone
|
 |
|
Title:
|
 |
Crystal structure of peptide-binding domain of kar2 protein from saccharomyces cerevisiae
|
|
Structure:
|
 |
78 kda glucose-regulated protein homolog. Chain: a. Fragment: peptide-binding domain: unp residues 438-586. Synonym: grp 78, immunoglobulin heavy chain-binding protein homolog, bip. Engineered: yes
|
|
Source:
|
 |
Saccharomyces cerevisiae. Yeast. Organism_taxid: 4932. Gene: grp78, j1248, kar2, ssd1, yjl034w. Expressed in: escherichia coli. Expression_system_taxid: 562.
|
|
Resolution:
|
 |
|
1.92Å
|
R-factor:
|
0.188
|
R-free:
|
0.230
|
|
|
Authors:
|
 |
J.Osipiuk,L.Bigelow,M.Gu,C.Sahi,E.A.Craig,A.Joachimiak,Midwest Center For Structural Genomics (Mcsg)
|
|
Key ref:
|
 |
J.Osipiuk
et al.
X-Ray crystal structure of peptide-Binding domain of protein from saccharomyces cerevisiae..
To be published,
.
|
 |
|
Date:
|
 |
|
10-Apr-09
|
Release date:
|
21-Apr-09
|
|
|
|
|
|
PROCHECK
|
|
|
|
|
Headers
|
 |
|
|
References
|
|
|
|
|
|
|
P16474
(BIP_YEAST) -
Endoplasmic reticulum chaperone BiP from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
|
|
|
|
Seq: Struc:
|
 |
 |
 |
682 a.a.
150 a.a.*
|
|
|
|
|
|
|
|
|
 |
 |
|
|
Key: |
 |
PfamA domain |
 |
 |
 |
Secondary structure |
 |
 |
CATH domain |
 |
|
*
PDB and UniProt seqs differ
at 1 residue position (black
cross)
|
|
|
|
|
 |
|
|
 |
 |
 |
 |
Enzyme class:
|
 |
E.C.3.6.4.10
- non-chaperonin molecular chaperone ATPase.
|
|
 |
 |
 |
 |
 |
Reaction:
|
 |
ATP + H2O = ADP + phosphate + H+
|
 |
 |
 |
 |
 |
ATP
|
+
|
H2O
|
=
|
ADP
|
+
|
phosphate
|
+
|
H(+)
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
|
|
 |
');
}
}
 |