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PDBsum entry 3fpk

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protein ligands metals Protein-protein interface(s) links
Flavoprotein, oxidoreductase PDB id
3fpk

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
247 a.a. *
Ligands
FAD ×2
Metals
_MG ×2
_CA
Waters ×711
* Residue conservation analysis
PDB id:
3fpk
Name: Flavoprotein, oxidoreductase
Title: Crystal structure of ferredoxin-NADP reductase from salmonella typhimurium
Structure: Ferredoxin-NADP reductase. Chain: a, b. Engineered: yes
Source: Salmonella typhimurium. Organism_taxid: 99287. Strain: lt2. Gene: fpr, stm4084. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
1.70Å     R-factor:   0.178     R-free:   0.223
Authors: Y.Kim,M.Gu,J.Stam,W.F.Anderson,A.Joachimiak,Center For Structural Genomics Of Infectious Diseases (Csgid)
Key ref: Y.Kim et al. Crystal structure of ferredoxin-Nadp reductase from salmonella typhimurium. To be published, .
Date:
05-Jan-09     Release date:   03-Feb-09    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q8ZKP5  (Q8ZKP5_SALTY) -  Flavodoxin/ferredoxin--NADP reductase from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Seq:
Struc:
248 a.a.
247 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class 2: E.C.1.18.1.2  - ferredoxin--NADP(+) reductase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

      Pathway:
Methionine Synthase
      Reaction: 2 reduced [2Fe-2S]-[ferredoxin] + NADP+ + H+ = 2 oxidized [2Fe-2S]- [ferredoxin] + NADPH
2 × reduced [2Fe-2S]-[ferredoxin]
+ NADP(+)
+ H(+)
= 2 × oxidized [2Fe-2S]- [ferredoxin]
+ NADPH
      Cofactor: FAD
FAD
Bound ligand (Het Group name = FAD) corresponds exactly
   Enzyme class 3: E.C.1.19.1.1  - flavodoxin--NADP(+) reductase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: reduced [flavodoxin] + NADP+ = oxidized [flavodoxin] + NADPH + 2 H+
2 × reduced [flavodoxin]
+ NADP(+)
= oxidized [flavodoxin]
+ 2 × NADPH
+ 2 × H(+)
      Cofactor: FAD
FAD
Bound ligand (Het Group name = FAD) corresponds exactly
Note, where more than one E.C. class is given (as above), each may correspond to a different protein domain or, in the case of polyprotein precursors, to a different mature protein.
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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