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PDBsum entry 3e05

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protein ligands metals Protein-protein interface(s) links
Transferase PDB id
3e05

 

 

 

 

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Contents
Protein chains
(+ 2 more) 188 a.a. *
Ligands
GOL ×2
Metals
_CL ×8
Waters ×537
* Residue conservation analysis
PDB id:
3e05
Name: Transferase
Title: Crystal structure of precorrin-6y c5,15-methyltransferase from geobacter metallireducens gs-15
Structure: Precorrin-6y c5,15-methyltransferase (decarboxylating). Chain: a, b, c, d, e, f, g, h. Fragment: c-terminal domain, residues 211-405. Engineered: yes
Source: Geobacter metallireducens. Organism_taxid: 269799. Strain: gs-15. Gene: gmet_0481. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
1.80Å     R-factor:   0.217     R-free:   0.262
Authors: Y.Patskovsky,U.A.Ramagopal,R.Toro,M.Dickey,S.Hu,M.Maletic,J.M.Sauder, S.K.Burley,S.C.Almo,New York Sgx Research Center For Structural Genomics (Nysgxrc)
Date:
30-Jul-08     Release date:   12-Aug-08    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q39YF0  (Q39YF0_GEOMG) -  Cobalt-precorrin-6B C5,C15-methyltransferase and C12-decarboxylase from Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15)
Seq:
Struc:
405 a.a.
188 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.1.1.132  - precorrin-6B C(5,15)-methyltransferase (decarboxylating).
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

      Pathway:
Corrin Biosynthesis (part 4)
      Reaction: precorrin-6B + 2 S-adenosyl-L-methionine = precorrin-8X + 2 S-adenosyl-L- homocysteine + CO2 + 3 H+
precorrin-6B
+ 2 × S-adenosyl-L-methionine
= precorrin-8X
+ 2 × S-adenosyl-L- homocysteine
+ CO2
+ 3 × H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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