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PDBsum entry 3dpb

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protein Protein-protein interface(s) links
Chaperone/structural protein PDB id
3dpb

 

 

 

 

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Contents
Protein chains
196 a.a. *
149 a.a. *
128 a.a. *
Waters ×130
* Residue conservation analysis
PDB id:
3dpb
Name: Chaperone/structural protein
Title: Crystal structure of the complex of the caf1m chaperone with the mini- fiber of two caf1 subunits (caf1:caf1), carrying the ala9val, ala11val, and leu13val mutations in the gd donor strand
Structure: Chaperone protein caf1m. Chain: a. Fragment: unp residues 24 to 258. Synonym: capsule protein fraction 1 machinery. Engineered: yes. F1 capsule antigen. Chain: b, c. Fragment: unp residues22 to 170. Engineered: yes.
Source: Yersinia pestis. Organism_taxid: 632. Gene: caf1m, ypmt1.82, y5194, y1098, yp_pmt084. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: caf1, ypmt1.84, y5196, y1100, yp_pmt082. Expression_system_taxid: 562
Resolution:
2.20Å     R-factor:   0.201     R-free:   0.244
Authors: L.J.Fooks,X.Yu,E.Moslehi-Mohebi,V.Tischenko,S.D.Knight,S.Macintyre, A.V.Zavialov
Key ref: L.J.Fooks et al. Hydrophobicity and rigidity of binding segments enable caf1m chaperone to act as assembly catalyst. To be published, .
Date:
07-Jul-08     Release date:   14-Jul-09    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
P26926  (CAF1M_YERPE) -  Chaperone protein caf1M from Yersinia pestis
Seq:
Struc:
258 a.a.
196 a.a.
Protein chain
Pfam   ArchSchema ?
P26948  (CAF1_YERPE) -  F1 capsule antigen from Yersinia pestis
Seq:
Struc:
170 a.a.
149 a.a.*
Protein chain
Pfam   ArchSchema ?
P26948  (CAF1_YERPE) -  F1 capsule antigen from Yersinia pestis
Seq:
Struc:
170 a.a.
128 a.a.
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 3 residue positions (black crosses)

 

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