spacer
spacer

PDBsum entry 3vcd

Go to PDB code: 
protein ligands metals Protein-protein interface(s) links
Electron transport PDB id
3vcd

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chains
(+ 2 more) 184 a.a.
Ligands
SO4 ×26
Metals
_CL
Waters ×375
PDB id:
3vcd
Name: Electron transport
Title: Computationally designed self-assembling octahedral cage protein, o333, crystallized in space group r32
Structure: Propanediol utilization polyhedral body protein pdut. Chain: a, b, c, d, e, f, g, h. Engineered: yes. Mutation: yes
Source: Salmonella enterica. Organism_taxid: 28901. Gene: pdut. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
2.35Å     R-factor:   0.182     R-free:   0.213
Authors: M.R.Sawaya,N.P.King,W.Sheffler,D.Baker,T.O.Yeates
Key ref: N.P.King et al. (2012). Computational design of self-assembling protein nanomaterials with atomic level accuracy. Science, 336, 1171-1174. PubMed id: 22654060
Date:
03-Jan-12     Release date:   06-Jun-12    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q9XDM8  (Q9XDM8_SALTY) -  Bacterial microcompartment shell protein PduT from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Seq:
Struc:
184 a.a.
184 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 10 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.?
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

 

 
Science 336:1171-1174 (2012)
PubMed id: 22654060  
 
 
Computational design of self-assembling protein nanomaterials with atomic level accuracy.
N.P.King, W.Sheffler, M.R.Sawaya, B.S.Vollmar, J.P.Sumida, I.André, T.Gonen, T.O.Yeates, D.Baker.
 
  ABSTRACT  
 
No abstract given.

 

Literature references that cite this PDB file's key reference

  PubMed id Reference
23135467 N.Koga, R.Tatsumi-Koga, G.Liu, R.Xiao, T.B.Acton, G.T.Montelione, and D.Baker (2012).
Principles for designing ideal protein structures.
  Nature, 491, 222-227.
PDB codes: 2kl8 2ln3 2lta 2lv8 2lvb
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB codes are shown on the right.

 

spacer

spacer