 |
PDBsum entry 3v4b
|
|
|
|
PDB id:
|
|
|
|
| Name: |
|
Lyase
|
|
|
Title:
|
|
Crystal structure of an enolase from the soil bacterium cellvibrio japonicus (target efi-502161) with bound mg and l-tartrate
|
|
Structure:
|
|
Starvation sensing protein rspa. Chain: a. Engineered: yes
|
|
Source:
|
|
Cellvibrio japonicus. Organism_taxid: 498211. Strain: ueda107. Gene: rspa, cja_3069. Expressed in: escherichia coli. Expression_system_taxid: 469008.
|
|
Resolution:
|
|
|
1.40Å
|
R-factor:
|
0.149
|
R-free:
|
0.162
|
|
|
Authors:
|
|
M.W.Vetting,R.Toro,R.Bhosle,S.R.Wasserman,L.L.Morisco,S.Sojitra, R.D.Seidel,B.Hillerich,E.Washington,A.Scott Glenn,S.Chowdhury, B.Evans,J.Hammonds,N.Al Obaidi,W.D.Zencheck,H.J.Imker,J.A.Gerlt, S.C.Almo,Enzyme Function Initiative (Efi)
|
|
Key ref:
|
|
M.W.Vetting
et al.
Crystal structure of an enolase from the soil bacteri cellvibrio japonicus (target efi-502161) with bound m l-Tartrate.
To be published,
.
|
|
|
Date:
|
|
|
14-Dec-11
|
Release date:
|
28-Dec-11
|
|
|
|
|
|
|
PROCHECK
|
|
|
|
|
|
Headers
|
|
|
|
References
|
|
|
|
|
|
|
|
B3PDB1
(MAND_CELJU) -
D-galactonate dehydratase family member RspA from Cellvibrio japonicus (strain Ueda107)
|
|
|
|
Seq:
Struc:
|
|
|
|
402 a.a.
384 a.a.
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Key: |
|
 |
Secondary structure |
|
 |
CATH domain |
|
|
|
|
|
|
|
|
|
|
|
|
|
Enzyme class 1:
|
|
E.C.4.2.1.-
- ?????
|
|
|
|
|
|
|
Enzyme class 2:
|
|
E.C.4.2.1.8
- mannonate dehydratase.
|
|
|
|
|
|
|
Pathway:
|
|
|
|
|
|
|
|
Reaction:
|
|
D-mannonate = 2-dehydro-3-deoxy-D-gluconate + H2O
|
|
|
|
|
|
D-mannonate
|
=
|
2-dehydro-3-deoxy-D-gluconate
|
+
|
H2O
|
|
|
|
|
|
|
|
|
|
|
|
|
Note, where more than one E.C. class is given (as above), each may
correspond to a different protein domain or, in the case of polyprotein
precursors, to a different mature protein.
|
|
|
|
Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
|
|
|
|
Links
