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PDBsum entry 3v17

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protein ligands Protein-protein interface(s) links
Oxidoreductase PDB id
3v17

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
276 a.a.
Ligands
AKG ×4
Waters ×402
PDB id:
3v17
Name: Oxidoreductase
Title: Crystal structure of the fe(ii)/alpha-ketoglutarate dependent taurine dioxygenase from pseudomonas putida kt2440
Structure: Alpha-ketoglutarate-dependent taurine dioxygenase. Chain: a, c, b, d. Engineered: yes
Source: Pseudomonas putida. Organism_taxid: 160488. Strain: kt2440. Gene: pp0230, pp_0230, taud. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
2.57Å     R-factor:   0.180     R-free:   0.225
Authors: S.H.Knauer,H.Dobbek
Key ref: S.H.Knauer et al. (2012). The Fe(II)/α-ketoglutarate-dependent taurine dioxygenases from Pseudomonas putida and Escherichia coli are tetramers. Febs J, 279, 816-831. PubMed id: 22221834
Date:
09-Dec-11     Release date:   18-Jan-12    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q88RA3  (Q88RA3_PSEPK) -  Alpha-ketoglutarate-dependent taurine dioxygenase from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Seq:
Struc:
277 a.a.
276 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.1.14.11.17  - taurine dioxygenase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: taurine + 2-oxoglutarate + O2 = aminoacetaldehyde + sulfite + succinate + CO2 + H+
taurine
Bound ligand (Het Group name = AKG)
corresponds exactly
+ 2-oxoglutarate
+ O2
= aminoacetaldehyde
+ sulfite
+ succinate
+ CO2
+ H(+)
      Cofactor: Fe(2+); L-ascorbate
Fe(2+)
L-ascorbate
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
Febs J 279:816-831 (2012)
PubMed id: 22221834  
 
 
The Fe(II)/α-ketoglutarate-dependent taurine dioxygenases from Pseudomonas putida and Escherichia coli are tetramers.
S.H.Knauer, O.Hartl-Spiegelhauer, S.Schwarzinger, P.Hänzelmann, H.Dobbek.
 
  ABSTRACT  
 
No abstract given.

 

 

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