PDBsum entry 3uos

Ribosome

PDB id: 3uos

Contents

Protein chains

79 a.a.

77 a.a.

63 a.a.

58 a.a.

56 a.a.

50 a.a.

46 a.a.

64 a.a.

38 a.a.

271 a.a.

209 a.a.

201 a.a.

177 a.a.

176 a.a.

163 a.a.

141 a.a.

30 a.a.

142 a.a.

122 a.a.

143 a.a.

136 a.a.

120 a.a.

116 a.a.

114 a.a.

117 a.a.

103 a.a.

110 a.a.

93 a.a.

102 a.a.

94 a.a.

DNA/RNA

Obsolete entry

PDB id:

3uos

Name:

Ribosome

Title:

Crystal structure of release factor rf3 trapped in the gtp state on a rotated conformation of the ribosome (without viomycin)

Structure:

50s ribosomal protein l27. Chain: 0. 50s ribosomal protein l28. Chain: 1. 50s ribosomal protein l29. Chain: 2. 50s ribosomal protein l30. Chain: 3. 50s ribosomal protein l32.

Source:

Escherichia coli. Organism_taxid: 562. Strain: csh142. Strain: csh142

Resolution:

3.70Å R-factor: 0.240 R-free: 0.290

Authors:

J.Zhou,L.Lancaster,S.Trakhanov,H.F.Noller

Key ref:

J.Zhou et al. (2012). Crystal structure of release factor RF3 trapped in the GTP state on a rotated conformation of the ribosome. Rna, 18, 230-240. PubMed id: 22187675

Date:

17-Nov-11 Release date: 11-Jan-12

Protein chain

P0A7L8  (RL27_ECOLI) -  50S ribosomal protein L27 from Escherichia coli (strain K12)

Seq: 85 a.a.

Struc: 79 a.a.

Protein chain

P0A7M2  (RL28_ECOLI) -  50S ribosomal protein L28 from Escherichia coli (strain K12)

Seq: 78 a.a.

Struc: 77 a.a.

Protein chain

P0A7M6  (RL29_ECOLI) -  50S ribosomal protein L29 from Escherichia coli (strain K12)

Seq: 63 a.a.

Struc: 63 a.a.

Protein chain

P0AG51  (RL30_ECOLI) -  50S ribosomal protein L30 from Escherichia coli (strain K12)

Seq: 59 a.a.

Struc: 58 a.a.

Protein chain

P0A7N4  (RL32_ECOLI) -  50S ribosomal protein L32 from Escherichia coli (strain K12)

Seq: 57 a.a.

Struc: 56 a.a.

Protein chain

P0A7N9  (RL33_ECOLI) -  50S ribosomal protein L33 from Escherichia coli (strain K12)

Seq: 55 a.a.

Struc: 50 a.a.

Protein chain

P0A7P5  (RL34_ECOLI) -  50S ribosomal protein L34 from Escherichia coli (strain K12)

Seq: 46 a.a.

Struc: 46 a.a.

Protein chain

P0A7Q1  (RL35_ECOLI) -  50S ribosomal protein L35 from Escherichia coli (strain K12)

Seq: 65 a.a.

Struc: 64 a.a.

Protein chain

P0A7Q6  (RL36_ECOLI) -  50S ribosomal protein L36 from Escherichia coli (strain K12)

Seq: 38 a.a.

Struc: 38 a.a.

Protein chain

P60422  (RL2_ECOLI) -  50S ribosomal protein L2 from Escherichia coli (strain K12)

Seq: 273 a.a.

Struc: 271 a.a.

Protein chain

P60438  (RL3_ECOLI) -  50S ribosomal protein L3 from Escherichia coli (strain K12)

Seq: 209 a.a.

Struc: 209 a.a.

Protein chain

P60723  (RL4_ECOLI) -  50S ribosomal protein L4 from Escherichia coli (strain K12)

Seq: 201 a.a.

Struc: 201 a.a.

Protein chain

P62399  (RL5_ECOLI) -  50S ribosomal protein L5 from Escherichia coli (strain K12)

Seq: 179 a.a.

Struc: 177 a.a.

Protein chain

P0AG55  (RL6_ECOLI) -  50S ribosomal protein L6 from Escherichia coli (strain K12)

Seq: 177 a.a.

Struc: 176 a.a.

Protein chain

P0A7J3  (RL10_ECOLI) -  50S ribosomal protein L10 from Escherichia coli (strain K12)

Seq: 165 a.a.

Struc: 163 a.a.

Protein chain

P0A7J7  (RL11_ECOLI) -  50S ribosomal protein L11 from Escherichia coli (strain K12)

Seq: 142 a.a.

Struc: 141 a.a.

Protein chains

P0A7K2  (RL7_ECOLI) -  50S ribosomal protein L7/L12 from Escherichia coli (strain K12)

Seq: 121 a.a.

Struc: 30 a.a.

Protein chain

P0AA10  (RL13_ECOLI) -  50S ribosomal protein L13 from Escherichia coli (strain K12)

Seq: 142 a.a.

Struc: 142 a.a.

Protein chain

P0ADY3  (RL14_ECOLI) -  50S ribosomal protein L14 from Escherichia coli (strain K12)

Seq: 123 a.a.

Struc: 122 a.a.

Protein chain

P02413  (RL15_ECOLI) -  50S ribosomal protein L15 from Escherichia coli (strain K12)

Seq: 144 a.a.

Struc: 143 a.a.

Protein chain

P0ADY7  (RL16_ECOLI) -  50S ribosomal protein L16 from Escherichia coli (strain K12)

Seq: 136 a.a.

Struc: 136 a.a.

Protein chain

P0AG44  (RL17_ECOLI) -  50S ribosomal protein L17 from Escherichia coli (strain K12)

Seq: 127 a.a.

Struc: 120 a.a.

Protein chain

P0C018  (RL18_ECOLI) -  50S ribosomal protein L18 from Escherichia coli (strain K12)

Seq: 117 a.a.

Struc: 116 a.a.

Protein chain

P0A7K6  (RL19_ECOLI) -  50S ribosomal protein L19 from Escherichia coli (strain K12)

Seq: 115 a.a.

Struc: 114 a.a.

Protein chain

P0A7L3  (RL20_ECOLI) -  50S ribosomal protein L20 from Escherichia coli (strain K12)

Seq: 118 a.a.

Struc: 117 a.a.

Protein chain

P0AG48  (RL21_ECOLI) -  50S ribosomal protein L21 from Escherichia coli (strain K12)

Seq: 103 a.a.

Struc: 103 a.a.

Protein chain

P61175  (RL22_ECOLI) -  50S ribosomal protein L22 from Escherichia coli (strain K12)

Seq: 110 a.a.

Struc: 110 a.a.

Protein chain

P0ADZ0  (RL23_ECOLI) -  50S ribosomal protein L23 from Escherichia coli (strain K12)

Seq: 100 a.a.

Struc: 93 a.a.

Protein chain

P60624  (RL24_ECOLI) -  50S ribosomal protein L24 from Escherichia coli (strain K12)

Seq: 104 a.a.

Struc: 102 a.a.

Protein chain

P68919  (RL25_ECOLI) -  50S ribosomal protein L25 from Escherichia coli (strain K12)

Seq: 94 a.a.

Struc: 94 a.a.

DNA/RNA chains

G-G-U-U-A-A-G-C-G-A-C-U-A-A-G-C-G-U-A-C-A-C-G-G-U-G-G-A-U-G-C-C-C-U-G-G-C-A-G- ... 2853 bases

G-C-C-U-G-G-C-G-G-C-C-G-U-A-G-C-G-C-G-G-U-G-G-U-C-C-C-A-C-C-U-G-A-C-C-C-C-A-U- 118 bases

Rna 18:230-240 (2012)

PubMed id: 22187675

Crystal structure of release factor RF3 trapped in the GTP state on a rotated conformation of the ribosome.

J.Zhou, L.Lancaster, S.Trakhanov, H.F.Noller.

ABSTRACT

No abstract given.