 |
PDBsum entry 3sae
|
|
|
|
PDB id:
|
|
|
|
| Name: |
|
Lyase
|
|
|
Title:
|
|
Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production
|
|
Structure:
|
|
Alpha-bisabolene synthase. Chain: a. Synonym: (e)-alpha-bisabolene synthase, agfeabis. Engineered: yes
|
|
Source:
|
|
Abies grandis. Grand fir,lowland fir,lowland white fir,silver fir, white fir,yellow fir. Organism_taxid: 46611. Gene: ag1. Expressed in: escherichia coli. Expression_system_taxid: 511693.
|
|
Resolution:
|
|
|
1.96Å
|
R-factor:
|
0.162
|
R-free:
|
0.205
|
|
|
Authors:
|
|
R.P.Mcandrew,P.P.Peralta-Yahya,A.Degiovanni,J.H.Pereira,M.Z.Hadi, J.D.Keasling,P.D.Adams
|
|
Key ref:
|
|
R.P.McAndrew
et al.
(2011).
Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production.
Structure,
19,
1876-1884.
PubMed id:
|
|
|
Date:
|
|
|
02-Jun-11
|
Release date:
|
14-Dec-11
|
|
|
|
|
|
|
PROCHECK
|
|
|
|
|
|
Headers
|
|
|
|
References
|
|
|
|
|
|
|
|
O81086
(TPSD1_ABIGR) -
Alpha-bisabolene synthase from Abies grandis
|
|
|
|
Seq:
Struc:
|
|
|
|
817 a.a.
780 a.a.
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Key: |
 |
PfamA domain |
|
|
 |
Secondary structure |
|
 |
CATH domain |
|
|
|
|
|
|
|
|
|
|
|
|
|
Enzyme class:
|
|
E.C.4.2.3.38
- alpha-bisabolene synthase.
|
|
|
|
|
|
|
Reaction:
|
|
(2E,6E)-farnesyl diphosphate = (E,R)-alpha-bisabolene + diphosphate
|
|
|
|
|
|
(2E,6E)-farnesyl diphosphate
Bound ligand (Het Group name = )
matches with 51.72% similarity
|
=
|
(E,R)-alpha-bisabolene
|
+
|
diphosphate
|
|
|
|
|
|
|
|
|
|
Cofactor:
|
|
Mg(2+)
|
|
|
|
|
|
|
|
|
Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
| |
|
|
| |
|
|
Structure
19:1876-1884
(2011)
|
|
PubMed id:
|
|
|
|
|
|
| |
|
Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production.
|
|
R.P.McAndrew,
P.P.Peralta-Yahya,
A.DeGiovanni,
J.H.Pereira,
M.Z.Hadi,
J.D.Keasling,
P.D.Adams.
|
|
|
|
|
| |
ABSTRACT
|
|
|
|
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
 |
 |
|
Literature references that cite this PDB file's key reference
|
|
|
| |
PubMed id
|
|
Reference
|
|
|
|
|
|
P.P.Peralta-Yahya,
F.Zhang,
S.B.del Cardayre,
and
J.D.Keasling
(2012).
Microbial engineering for the production of advanced biofuels.
|
| |
Nature,
488,
320-328.
|
|
|
|
|
|
The most recent references are shown first.
Citation data come partly from CiteXplore and partly
from an automated harvesting procedure. Note that this is likely to be
only a partial list as not all journals are covered by
either method. However, we are continually building up the citation data
so more and more references will be included with time.
|
|
Links
