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PDBsum entry 3m7v

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protein ligands metals Protein-protein interface(s) links
Isomerase PDB id
3m7v

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
401 a.a. *
Ligands
GOL
Metals
_MN ×4
Waters ×315
* Residue conservation analysis
PDB id:
3m7v
Name: Isomerase
Title: Crystal structure of phosphopentomutase from streptococcus mutans
Structure: Phosphopentomutase. Chain: a, b. Synonym: phosphodeoxyribomutase. Engineered: yes
Source: Streptococcus mutans. Organism_taxid: 1309. Gene: deob, smu_1233. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
2.00Å     R-factor:   0.182     R-free:   0.211
Authors: A.A.Fedorov,J.Bonanno,E.V.Fedorov,S.K.Burley,S.C.Almo,New York Sgx Research Center For Structural Genomics (Nysgxrc)
Key ref: A.A.Fedorov et al. Crystal structure of phosphopentomutase from streptoc mutans. To be published, .
Date:
17-Mar-10     Release date:   07-Apr-10    
Supersedes: 2i09
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q8DTU0  (DEOB_STRMU) -  Phosphopentomutase from Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
Seq:
Struc:
403 a.a.
401 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.5.4.2.7  - phosphopentomutase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: alpha-D-ribose 1-phosphate = D-ribose 5-phosphate
alpha-D-ribose 1-phosphate
Bound ligand (Het Group name = GOL)
matches with 42.86% similarity
= D-ribose 5-phosphate
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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