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PDBsum entry 3e95

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protein ligands Protein-protein interface(s) links
Ligase PDB id
3e95

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
147 a.a. *
138 a.a. *
Ligands
UNX-UNX-UNX-UNX-
UNX
Waters ×130
* Residue conservation analysis
PDB id:
3e95
Name: Ligase
Title: Crystal structure of the plasmodium falciparum ubiquitin conjugating enzyme complex, pfubc13-pfuev1a
Structure: Ubiquitin carrier protein. Chain: a, b. Engineered: yes. Ubiquitin-conjugating enzyme e2. Chain: c. Engineered: yes
Source: Plasmodium falciparum 3d7. Organism_taxid: 36329. Gene: pfe1350c. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: mal3p2.20, pfc0255c.
Resolution:
2.50Å     R-factor:   0.249     R-free:   0.258
Authors: A.K.Wernimont,A.Lam,A.Ali,S.Brokx,Y.H.Lin,Y.Zhao,J.Lew, M.Ravichandran,G.Wasney,M.Vedadi,I.Kozieradzki,M.Schapira, A.Bochkarev,M.Wilkstrom,C.Bountra,C.H.Arrowsmith,A.M.Edwards,R.Hui, W.Qiu,V.B.Brand,Structural Genomics Consortium (Sgc)
Key ref: A.K.Wernimont et al. Crystal structure of the plasmodium falciparum ubiquitin conjugating enzyme complex, Pfubc13-Pfuev1a. To be published, .
Date:
21-Aug-08     Release date:   30-Sep-08    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q8I3J4  (Q8I3J4_PLAF7) -  Ubiquitin-conjugating enzyme E2 N, putative from Plasmodium falciparum (isolate 3D7)
Seq:
Struc:
152 a.a.
147 a.a.
Protein chain
Pfam   ArchSchema ?
O97241  (O97241_PLAF7) -  Ubiquitin-conjugating enzyme E2, putative from Plasmodium falciparum (isolate 3D7)
Seq:
Struc:
142 a.a.
138 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: Chains A, B, C: E.C.6.3.2.19  - Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine
ATP
+ ubiquitin
+ protein lysine
= AMP
+ diphosphate
+ protein N-ubiquityllysine
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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