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PDBsum entry 2w4l

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protein metals Protein-protein interface(s) links
Hydrolase PDB id
2w4l

 

 

 

 

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Contents
Protein chains
160 a.a. *
142 a.a. *
150 a.a. *
Metals
_CL ×4
_ZN ×6
Waters ×252
* Residue conservation analysis
PDB id:
2w4l
Name: Hydrolase
Title: Human dcmp deaminase
Structure: Deoxycytidylate deaminase. Chain: a, b, c, d, e, f. Fragment: 5-173. Synonym: dcmp deaminse. Engineered: yes. Other_details: construct has c-terminal histag
Source: Homo sapiens. Human. Organism_taxid: 9606. Expressed in: escherichia coli. Expression_system_taxid: 469008. Other_details: mgc
Resolution:
2.10Å     R-factor:   0.202     R-free:   0.243
Authors: M.I.Siponen,M.Moche,C.H.Arrowsmith,H.Berglund,C.Bountra,R.Collins, L.G.Dahlgren,A.M.Edwards,S.Flodin,A.Flores,S.Graslund,M.Hammarstrom, A.Johansson,I.Johansson,T.Karlberg,T.Kotenyova,L.Lehtio,M.E.Nilsson, T.Nyman,C.Persson,J.Sagemark,H.Schuler,A.G.Thorsell,L.Tresaugues, S.Van Den Berg,J.Weigelt,M.Welin,M.Wikstrom,M.Wisniewska,P.Nordlund
Key ref: M.I.Siponen et al. The crystal structure of human dcmp deaminase. To be published, .
Date:
28-Nov-08     Release date:   13-Jan-09    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P32321  (DCTD_HUMAN) -  Deoxycytidylate deaminase from Homo sapiens
Seq:
Struc:
178 a.a.
160 a.a.
Protein chain
Pfam   ArchSchema ?
P32321  (DCTD_HUMAN) -  Deoxycytidylate deaminase from Homo sapiens
Seq:
Struc:
178 a.a.
142 a.a.
Protein chain
Pfam   ArchSchema ?
P32321  (DCTD_HUMAN) -  Deoxycytidylate deaminase from Homo sapiens
Seq:
Struc:
178 a.a.
150 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: Chains A, B, C, D, E, F: E.C.3.5.4.12  - dCMP deaminase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: dCMP + H2O + H+ = dUMP + NH4+
dCMP
+ H2O
+ H(+)
= dUMP
+ NH4(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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