 |
PDBsum entry 2uw2
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Oxidoreductase
|
PDB id
|
|
|
|
2uw2
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Contents |
 |
|
|
|
|
|
|
|
|
|
|
|
* Residue conservation analysis
|
|
|
|
|
PDB id:
|
 |
|
 |
| Name: |
 |
Oxidoreductase
|
 |
|
Title:
|
 |
Crystal structure of human ribonucleotide reductase subunit r2
|
|
Structure:
|
 |
Ribonucleoside-diphosphate reductase m2 subunit. Chain: a. Fragment: residues 60-389. Synonym: ribonucleotide reductase small subunit, ribonucleotide reductase small chain, ribonucleotide reductase subunit r2. Engineered: yes
|
|
Source:
|
 |
Homo sapiens. Human. Organism_taxid: 9606. Expressed in: escherichia coli. Expression_system_taxid: 469008.
|
|
Resolution:
|
 |
|
2.80Å
|
R-factor:
|
0.233
|
R-free:
|
0.294
|
|
|
Authors:
|
 |
M.Welin,D.Ogg,C.Arrowsmith,H.Berglund,R.Busam,R.Collins,A.Edwards, M.Ehn,S.Flodin,A.Flores,S.Graslund,M.Hammarstrom,B.M.Hallberg, L.Holmberg Schiavone,M.Hogbom,T.Kotenyova,A.Magnusdottir,M.Moche, P.Nilsson-Ehle,T.Nyman,C.Persson,J.Sagemark,M.Sundstrom,P.Stenmark, J.Uppenberg,A.G.Thorsell,S.Van Den Berg,K.Wallden,J.Weigelt, P.Nordlund
|
|
Key ref:
|
 |
M.Welin
et al.
Crystal structure of human ribonucleotide reductase subunit r2.
To be published,
.
|
 |
|
Date:
|
 |
|
16-Mar-07
|
Release date:
|
03-Apr-07
|
|
|
Supersedes:
|
|
|
|
|
|
|
PROCHECK
|
|
|
|
|
Headers
|
 |
|
|
References
|
|
|
|
|
|
|
P31350
(RIR2_HUMAN) -
Ribonucleoside-diphosphate reductase subunit M2 from Homo sapiens
|
|
|
|
Seq: Struc:
|
 |
 |
 |
389 a.a.
275 a.a.*
|
|
|
|
|
|
|
|
|
 |
 |
|
|
Key: |
 |
PfamA domain |
 |
 |
 |
Secondary structure |
 |
 |
CATH domain |
 |
|
*
PDB and UniProt seqs differ
at 1 residue position (black
cross)
|
|
|
|
|
 |
|
|
 |
 |
 |
 |
Enzyme class:
|
 |
E.C.1.17.4.1
- ribonucleoside-diphosphate reductase.
|
|
 |
 |
 |
 |
 |
Reaction:
|
 |
a 2'-deoxyribonucleoside 5'-diphosphate + [thioredoxin]-disulfide + H2O = a ribonucleoside 5'-diphosphate + [thioredoxin]-dithiol
|
 |
 |
 |
 |
 |
2'-deoxyribonucleoside diphosphate
|
+
|
thioredoxin disulfide
|
+
|
H(2)O
|
=
|
ribonucleoside diphosphate
|
+
|
thioredoxin
|
|
 |
 |
 |
 |
 |
 |
 |
 |
Cofactor:
|
 |
Fe(3+) or adenosylcob(III)alamin or Mn(2+)
|
 |
 |
 |
 |
 |
Fe(3+)
|
or
|
adenosylcob(III)alamin
|
or
|
Mn(2+)
|
|
 |
 |
 |
 |
|
Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
|
|
 |
');
}
}
 |