spacer
spacer

PDBsum entry 2oyf

Go to PDB code: 
protein ligands links
Hydrolase PDB id
2oyf

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chain
121 a.a. *
Ligands
SO4 ×5
IAC
ACY
Waters ×224
* Residue conservation analysis
PDB id:
2oyf
Name: Hydrolase
Title: Crystal structure of the complex of phospholipase a2 with indole acetic acid at 1.2 a resolution
Structure: Phospholipase a2 vrv-pl-viiia. Chain: a. Synonym: phospholipase a2, phosphatidylcholine 2-acylhydrolase, dpla2. Ec: 3.1.1.4
Source: Daboia russellii pulchella. Organism_taxid: 97228. Strain: pulchella. Secretion: venom
Resolution:
1.20Å     R-factor:   0.189     R-free:   0.208
Authors: S.Kumar,G.Hariprasad,N.Singh,S.Sharma,P.Kaur,M.Perbandt,C.Betzel, T.P.Singh
Key ref: S.Kumar et al. Crystal structure of the complex of phospholipase a2 with indole acetic acid at 1.2 a resolution. To be published, .
Date:
22-Feb-07     Release date:   20-Mar-07    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P59071  (PA2B8_DABRR) -  Basic phospholipase A2 VRV-PL-VIIIa from Daboia russelii
Seq:
Struc:
121 a.a.
121 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.3.1.1.4  - phospholipase A2.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: a 1,2-diacyl-sn-glycero-3-phosphocholine + H2O = a 1-acyl-sn-glycero-3- phosphocholine + a fatty acid + H+
1,2-diacyl-sn-glycero-3-phosphocholine
+ H2O
= 1-acyl-sn-glycero-3- phosphocholine
+
fatty acid
Bound ligand (Het Group name = ACY)
matches with 60.00% similarity
+ H(+)
      Cofactor: Ca(2+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

spacer

spacer