PDBsum entry 2m1v

DNA/RNA

PDB id: 2m1v

Contents

DNA/RNA

PDB id:

2m1v

Name:

DNA/RNA

Title:

Nmr solution structure of the d3'-hairpin from the sc.Ai5gamma group ii intron including the ebs1:dibs1 rna:dna hybrid

Structure:

RNA (29-mer). Chain: a. Fragment: d3'ebs1. Engineered: yes. Dna_(5'-d( Cp Ap Gp Tp Gp Tp C)-3')_. Chain: b. Fragment: dibs1. Engineered: yes

Source:

Synthetic: yes. Saccharomyces cerevisiae. Organism_taxid: 4932. Other_details: in vitro transcription from a synthetic double- stranded DNA template using t7 RNA polymerase. Synthetic construct. Organism_taxid: 32630

NMR struc:

18 models

Authors:

M.Skilandat,R.K.O.Sigel

Key ref:

M.Skilandat and R.K.Sigel (2014). The role of Mg(II) in DNA cleavage site recognition in group II intron ribozymes: solution structure and metal ion binding sites of the RNA-DNA complex. J Biol Chem, 289, 20650-20663. PubMed id: 24895129 DOI: 10.1074/jbc.M113.542381

Date:

07-Dec-12 Release date: 11-Jun-14

DNA/RNA chains

G-G-A-G-U-A-U-G-U-A-U-U-G-G-C-A-C-U-G-A-G-C-A-U-A-C-U-C-C 29 bases

C-A-G-T-G-T-C 7 bases

DOI no: 10.1074/jbc.M113.542381

J Biol Chem 289:20650-20663 (2014)

PubMed id: 24895129

The role of Mg(II) in DNA cleavage site recognition in group II intron ribozymes: solution structure and metal ion binding sites of the RNA-DNA complex.

M.Skilandat, R.K.Sigel.

ABSTRACT

No abstract given.