PDBsum entry 2kmn

Hydrolase/antibiotic

PDB id: 2kmn

Contents

Protein chain

147 a.a. *

Ligands

BB2

Metals

_ZN

* Residue conservation analysis

PDB id:

2kmn

Name:

Hydrolase/antibiotic

Title:

Solution structure of peptide deformylase complexed with actinonin

Structure:

Peptide deformylase. Chain: a. Synonym: pdf, polypeptide deformylase. Engineered: yes

Source:

Escherichia coli k-12. Organism_taxid: 83333. Gene: def, fms, b3287, jw3248. Expressed in: escherichia coli. Expression_system_taxid: 562.

NMR struc:

20 models

Authors:

C.A.Mcelroy,C.D.Amero,D.W.Byerly,M.P.Foster

Key ref:

C.A.Mcelroy et al. Solution structure of peptide deformylase complexed with actinonin. To be published, .

Date:

01-Aug-09 Release date: 25-Aug-09

Protein chain

P0A6K3  (DEF_ECOLI) -  Peptide deformylase from Escherichia coli (strain K12)

Seq: 169 a.a.

Struc: 147 a.a.

Enzyme reactions

• Enzyme class: E.C.3.5.1.88 - peptide deformylase.
• Reaction: N-terminal N-formyl-L-methionyl-[peptide] + H2O = N-terminal L-methionyl- [peptide] + formate
• Cofactor: Fe(2+)

Molecule diagrams generated from .mol files obtained from the KEGG ftp site