spacer
spacer

PDBsum entry 2jbk

Go to PDB code: 
protein ligands metals links
Hydrolase PDB id
2jbk

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chain
687 a.a. *
Ligands
NAG-NAG ×3
NAG-NAG-BMA-MAN
NAG ×3
QUS
Metals
_ZN ×2
_CA
_CL
Waters ×21
* Residue conservation analysis
PDB id:
2jbk
Name: Hydrolase
Title: Membrane-bound glutamate carboxypeptidase ii (gcpii) in complex with quisqualic acid (quisqualate, alpha-amino-3,5-dioxo-1,2,4- oxadiazolidine-2-propanoic acid)
Structure: Glutamate carboxypeptidase 2. Chain: a. Fragment: extracellular part, residues 44-750. Synonym: membrane glutamate carboxypeptidase, mgcp, n-acetylated- alpha-linked acidic dipeptidase i, naaladase i, pteroylpoly-gamma- glutamate carboxypeptidase, folylpoly-gamma-glutamate carboxypeptidase, fgcp, folate hydrolase 1, psm, prostate- specific membrane antigen, psma, glutamate carboxypeptidase ii. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Organ: brain. Expressed in: drosophila melanogaster. Expression_system_taxid: 7227. Expression_system_cell_line: schneider's cells
Resolution:
2.99Å     R-factor:   0.210    
Authors: J.R.Mesters,K.Henning,R.Hilgenfeld
Key ref:
J.R.Mesters et al. (2007). Human glutamate carboxypeptidase II inhibition: structures of GCPII in complex with two potent inhibitors, quisqualate and 2-PMPA. Acta Crystallogr D Biol Crystallogr, 63, 508-513. PubMed id: 17372356 DOI: 10.1107/S090744490700902X
Date:
07-Dec-06     Release date:   18-Dec-06    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q04609  (FOLH1_HUMAN) -  Glutamate carboxypeptidase 2 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
750 a.a.
687 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.3.4.17.21  - glutamate carboxypeptidase Ii.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: Release of an unsubstituted, C-terminal glutamyl residue, typically from Ac-Asp-Glu or folylpoly-gamma-glutamates.
      Cofactor: Zn(2+)

 

 
DOI no: 10.1107/S090744490700902X Acta Crystallogr D Biol Crystallogr 63:508-513 (2007)
PubMed id: 17372356  
 
 
Human glutamate carboxypeptidase II inhibition: structures of GCPII in complex with two potent inhibitors, quisqualate and 2-PMPA.
J.R.Mesters, K.Henning, R.Hilgenfeld.
 
  ABSTRACT  
 
Human glutamate carboxypeptidase II (GCPII) occurs in the central nervous system as well as in human prostate (where it is called prostate-specific membrane antigen; PSMA). Inhibitors of the enzyme have been shown to provide neuroprotection, but may also be useful for the detection, imaging and treatment of prostate cancer. Crystal structures were determined of the extracellular part of GCPII (amino-acid residues 44-750) in complex with two potent inhibitors, quisqualate and 2-PMPA (the strongest GCPII inhibitor to date), at resolutions of 3.0 and 2.2 A, respectively. In addition, models were constructed for binding of the inhibitors willardiine, homoibotenate, L-2-amino-4-phosphonobutanoic acid and L-serine-O-sulfate to the S1' site of the enzyme. The common denominator for high-affinity binding to the S1' site is the formation of two strong salt bridges.
 
  Selected figure(s)  
 
Figure 1.
Figure 1 (a) Binding mode of glutamate to the S1' pocket of GCPII. (b)-(g) Chemical formulae of 2-PMPA (b), L-AP4 (c), L-SOS (d), quisqualate (e), HIBO (f) and willardiine (g).
 
  The above figure is reprinted by permission from the IUCr: Acta Crystallogr D Biol Crystallogr (2007, 63, 508-513) copyright 2007.  
  Figure was selected by an automated process.  

Literature references that cite this PDB file's key reference

  PubMed id Reference
21219587 B.R.Blank, P.Alayoglu, W.Engen, J.K.Choi, C.E.Berkman, and M.O.Anderson (2011).
N-Substituted Glutamyl Sulfonamides as Inhibitors of Glutamate Carboxypeptidase II (GCP2).
  Chem Biol Drug Des, 77, 241-247.  
19053825 Y.Chen, C.A.Foss, Y.Byun, S.Nimmagadda, M.Pullambhatla, J.J.Fox, M.Castanares, S.E.Lupold, J.W.Babich, R.C.Mease, and M.G.Pomper (2008).
Radiohalogenated prostate-specific membrane antigen (PSMA)-based ureas as imaging agents for prostate cancer.
  J Med Chem, 51, 7933-7943.  
17826690 T.Tsukamoto, K.M.Wozniak, and B.S.Slusher (2007).
Progress in the discovery and development of glutamate carboxypeptidase II inhibitors.
  Drug Discov Today, 12, 767-776.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time.

 

spacer

spacer