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PDBsum entry 2gcp

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protein ligands metals links
Signaling protein PDB id
2gcp

 

 

 

 

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Contents
Protein chain
178 a.a. *
Ligands
GSP
EDO ×2
Metals
_MG ×3
Waters ×157
* Residue conservation analysis
PDB id:
2gcp
Name: Signaling protein
Title: Crystal structure of the human rhoc-gsp complex
Structure: Rho-related gtp-binding protein rhoc. Chain: a. Synonym: rho cdna clone 9, h9. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: arh9, arhc, rhoc. Expressed in: escherichia coli. Expression_system_taxid: 469008.
Resolution:
2.15Å     R-factor:   0.162     R-free:   0.226
Authors: S.M.G.Dias,R.A.Cerione
Key ref: S.M.Dias and R.A.Cerione (2007). X-ray crystal structures reveal two activated states for RhoC. Biochemistry, 46, 6547-6558. PubMed id: 17497936 DOI: 10.1021/bi700035p
Date:
14-Mar-06     Release date:   27-Mar-07    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
P08134  (RHOC_HUMAN) -  Rho-related GTP-binding protein RhoC from Homo sapiens
Seq:
Struc:
193 a.a.
178 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.?
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

 

 
DOI no: 10.1021/bi700035p Biochemistry 46:6547-6558 (2007)
PubMed id: 17497936  
 
 
X-ray crystal structures reveal two activated states for RhoC.
S.M.Dias, R.A.Cerione.
 
  ABSTRACT  
 
RhoC is a member of the Rho family of Ras-related (small) GTPases and shares significant sequence similarity with the founding member of the family, RhoA. However, despite their similarity, RhoA and RhoC exhibit different binding preferences for effector proteins and give rise to distinct cellular outcomes, with RhoC being directly implicated in the invasiveness of cancer cells and the development of metastasis. While the structural analyses of the signaling-active and -inactive states of RhoA have been performed, thus far, the work on RhoC has been limited to an X-ray structure for its complex with the effector protein, mDia1 (for mammalian Diaphanous 1). Therefore, in order to gain insights into the molecular basis for RhoC activation, as well as clues regarding how it mediates distinct cellular responses relative to those induced by RhoA, we have undertaken a structural comparison of RhoC in its GDP-bound (signaling-inactive) state versus its GTP-bound (signaling-active) state as induced by the nonhydrolyzable GTP analogues, guanosine 5'-(beta,gamma-iminotriphosphate) (GppNHp) and guanosine 5'-(3-O-thiotriphosphate) (GTPgammaS). Interestingly, we find that GppNHp-bound RhoC only shows differences in its switch II domain, relative to GDP-bound RhoC, whereas GTPgammaS-bound RhoC exhibits differences in both its switch I and switch II domains. Given that each of the nonhydrolyzable GTP analogues is able to promote the binding of RhoC to effector proteins, these results suggest that RhoC can undergo at least two conformational transitions during its conversion from a signaling-inactive to a signaling-active state, similar to what has recently been proposed for the H-Ras and M-Ras proteins. In contrast, the available X-ray structures for RhoA suggest that it undergoes only a single conformational transition to a signaling-active state. These and other differences regarding the changes in the switch domains accompanying the activation of RhoA and RhoC provide plausible explanations for the functional specificity exhibited by the two GTPases.
 

Literature references that cite this PDB file's key reference

  PubMed id Reference
20649471 J.Heo (2011).
Redox control of GTPases: from molecular mechanisms to functional significance in health and disease.
  Antioxid Redox Signal, 14, 689-724.  
18348980 M.J.Phillips, G.Calero, B.Chan, S.Ramachandran, and R.A.Cerione (2008).
Effector proteins exert an important influence on the signaling-active state of the small GTPase Cdc42.
  J Biol Chem, 283, 14153-14164.
PDB code: 2qrz
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB code is shown on the right.

 

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