PDBsum entry 2ep7

Oxidoreductase

PDB id: 2ep7

Contents

Protein chains

338 a.a. *

Ligands

NAD ×2

Waters ×270

* Residue conservation analysis

PDB id:

2ep7

Name:

Oxidoreductase

Title:

Structural study of project id aq_1065 from aquifex aeolicus vf5

Structure:

Glyceraldehyde-3-phosphate dehydrogenase. Chain: a, b. Synonym: gapdh. Engineered: yes

Source:

Aquifex aeolicus. Organism_taxid: 63363. Expressed in: escherichia coli. Expression_system_taxid: 562.

Resolution:

2.30Å R-factor: 0.183 R-free: 0.215

Authors:

Y.Asada,N.Kunishima,Riken Structural Genomics/proteomics Initiative (Rsgi)

Key ref:

Y.Asada and n.kunishima Structural study of project id aq_1065 from aquifex aeolicus vf5. To be published, .

Date:

29-Mar-07 Release date: 02-Oct-07

Protein chains

O67161  (G3P_AQUAE) -  Glyceraldehyde-3-phosphate dehydrogenase from Aquifex aeolicus (strain VF5)

Seq: 342 a.a.

Struc: 338 a.a.

Enzyme reactions

• Enzyme class: E.C.1.2.1.12 - glyceraldehyde-3-phosphate dehydrogenase (phosphorylating).
• Pathway: Glyceraldehyde-3-phosphate Dehydrogenase (phosphorylating)
• Reaction: D-glyceraldehyde 3-phosphate + phosphate + NAD⁺ = (2R)-3-phospho- glyceroyl phosphate + NADH + H⁺

D-glyceraldehyde 3-phosphate + phosphate (Bound ligand (Het Group name = NAD) corresponds exactly) + NAD(+) = (2R)-3-phospho- glyceroyl phosphate + NADH + H(+)

Molecule diagrams generated from .mol files obtained from the KEGG ftp site