PDBsum entry 2d4w

Transferase

PDB id: 2d4w

Contents

Protein chains

503 a.a. *

Ligands

MPD ×4

Waters ×353

* Residue conservation analysis

PDB id:

2d4w

Name:

Transferase

Title:

Crystal structure of glycerol kinase from cellulomonas sp. Nt3060

Structure:

Glycerol kinase. Chain: a, b. Engineered: yes

Source:

Cellulomonas sp.. Organism_taxid: 40001. Strain: nt3060. Expressed in: escherichia coli. Expression_system_taxid: 562

Biol. unit:

Dimer (from PQS)

Resolution:

2.30Å R-factor: 0.195 R-free: 0.240

Authors:

K.Imada,T.Tamura,K.Namba,K.Inagaki

Key ref:

K.Imada et al. Structure of glycerol kinase from cellulomonas sp. Nt3060. To be published, .

Date:

24-Oct-05 Release date: 14-Nov-06

Protein chains

No UniProt id for this chain

Struc: 503 a.a.

Enzyme reactions

• Enzyme class: E.C.2.7.1.30 - glycerol kinase.
• Reaction: glycerol + ATP = sn-glycerol 3-phosphate + ADP + H⁺

glycerol + ATP (Bound ligand (Het Group name = MPD) matches with 55.56% similarity) = sn-glycerol 3-phosphate + ADP + H(+)

Molecule diagrams generated from .mol files obtained from the KEGG ftp site