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PDBsum entry 1x2m

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Transcription PDB id
1x2m

 

 

 

 

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Contents
Protein chain
64 a.a. *
* Residue conservation analysis
PDB id:
1x2m
Name: Transcription
Title: Solution structure of the homeobox domain of mouse lag1 longevity assurance homolog 6
Structure: Lag1 longevity assurance homolog 6. Chain: a. Fragment: homeobox domain. Engineered: yes
Source: Mus musculus. House mouse. Organism_taxid: 10090. Gene: lass6. Other_details: cell-free protein synthesis
NMR struc: 20 models
Authors: Y.O.Kamatari,T.Tomizawa,S.Koshiba,M.Inoue,T.Kigawa,S.Yokoyama,Riken Structural Genomics/proteomics Initiative (Rsgi)
Key ref: Y.O.Kamatari et al. Solution structure of the homeobox domain of mouse lag1 longevity assurance homolog 6. To be published, .
Date:
26-Apr-05     Release date:   26-Oct-05    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q8C172  (CERS6_MOUSE) -  Ceramide synthase 6 from Mus musculus
Seq:
Struc:
384 a.a.
64 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 12 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class 1: E.C.2.3.1.-  - ?????
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
   Enzyme class 2: E.C.2.3.1.291  - sphingoid base N-palmitoyltransferase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: a sphingoid base + hexadecanoyl-CoA = an N-hexadecanoyl-sphingoid base + CoA + H+
sphingoid base
+ hexadecanoyl-CoA
= N-hexadecanoyl-sphingoid base
+ CoA
+ H(+)
Note, where more than one E.C. class is given (as above), each may correspond to a different protein domain or, in the case of polyprotein precursors, to a different mature protein.
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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