spacer
spacer

PDBsum entry 1os2

Go to PDB code: 
protein ligands metals Protein-protein interface(s) links
Hydrolase PDB id
1os2

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chains
(+ 0 more) 165 a.a. *
Ligands
HAE ×2
ACT ×2
AZI ×2
Metals
_ZN ×12
_CA ×18
Waters ×308
* Residue conservation analysis
PDB id:
1os2
Name: Hydrolase
Title: Ternary enzyme-product-inhibitor complexes of human mmp12
Structure: Macrophage metalloelastase. Chain: a, b, c, d, e, f. Synonym: hme, matrix metalloproteinase-12, mmp-12, macrophage elastase, me. Engineered: yes. Mutation: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: mmp12 or hme. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
2.15Å     R-factor:   0.215     R-free:   0.271
Authors: I.Bertini,V.Calderone,M.Fragai,C.Luchinat,S.Mangani,B.Terni
Key ref: I.Bertini et al. (2003). X-ray structures of binary and ternary enzyme-product-inhibitor complexes of matrix metalloproteinases. Angew Chem Int Ed Engl, 42, 2673-2676. PubMed id: 12813751
Date:
18-Mar-03     Release date:   05-Aug-03    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P39900  (MMP12_HUMAN) -  Macrophage metalloelastase from Homo sapiens
Seq:
Struc:
470 a.a.
165 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 3 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.3.4.24.65  - macrophage elastase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: Hydrolysis of soluble and insoluble elastin. Specific cleavages are also produced at 14-Ala-|-Leu-15 and 16-Tyr-|-Leu-17 in the B chain of insulin.
      Cofactor: Ca(2+); Zn(2+)

 

 
Angew Chem Int Ed Engl 42:2673-2676 (2003)
PubMed id: 12813751  
 
 
X-ray structures of binary and ternary enzyme-product-inhibitor complexes of matrix metalloproteinases.
I.Bertini, V.Calderone, M.Fragai, C.Luchinat, S.Mangani, B.Terni.
 
  ABSTRACT  
 
No abstract given.

 

Literature references that cite this PDB file's key reference

  PubMed id Reference
19609998 I.Bertini, M.Fragai, C.Luchinat, M.Melikian, and C.Venturi (2009).
Characterisation of the MMP-12-elastin adduct.
  Chemistry, 15, 7842-7845.  
19282283 I.Bertini, M.Fragai, C.Luchinat, M.Melikian, E.Mylonas, N.Sarti, and D.I.Svergun (2009).
Interdomain Flexibility in Full-length Matrix Metalloproteinase-1 (MMP-1).
  J Biol Chem, 284, 12821-12828.  
18539597 R.Bhaskaran, M.O.Palmier, J.L.Lauer-Fields, G.B.Fields, and S.R.Van Doren (2008).
MMP-12 catalytic domain recognizes triple helical peptide models of collagen V with exosites and high activity.
  J Biol Chem, 283, 21779-21788.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time.

 

spacer

spacer