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PDBsum entry 1hce

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Actin binding PDB id
1hce

 

 

 

 

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Contents
Protein chain
118 a.a.
PDB id:
1hce
Name: Actin binding
Title: Structure of hisactophilin is similar to interleukin-1 beta and fibroblast growth factor
Structure: Hisactophilin. Chain: a. Engineered: yes
Source: Dictyostelium discoideum. Organism_taxid: 44689
NMR struc: 1 models
Authors: J.Habazettl,D.Gondol,R.Wiltscheck,J.Otlewski,M.Schleicher,T.A.Holak
Key ref: J.Habazettl et al. (1992). Structure of hisactophilin is similar to interleukin-1 beta and fibroblast growth factor. Nature, 359, 855-858. PubMed id: 1436061
Date:
12-Jul-94     Release date:   30-Sep-94    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
P13231  (HATA_DICDI) -  Hisactophilin-1 from Dictyostelium discoideum
Seq:
Struc:
118 a.a.
118 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 

 
Nature 359:855-858 (1992)
PubMed id: 1436061  
 
 
Structure of hisactophilin is similar to interleukin-1 beta and fibroblast growth factor.
J.Habazettl, D.Gondol, R.Wiltscheck, J.Otlewski, M.Schleicher, T.A.Holak.
 
  ABSTRACT  
 
The fast reaction of the actin-based cytoskeleton in motile cells after stimulation with a chemoattractant requires a signal-transduction chain that creates a very specific environment at distinct regions beneath the plasma membrane. Dictyostelium hisactophilin, a unique actin-binding protein, is a submembranous pH sensor that signals slight changes of the H+ concentration to actin by inducing actin polymerization and binding to microfilaments only at pH values below seven. It has a relative molecular mass of 13.5K and its most unusual feature is the presence of 31 histidine residues among its total of 118 amino acids. The transduction of an external signal from the plasma membrane to the cytoskeleton is poorly understood. Here we report the protein's structure in solution determined by nuclear magnetic resonance spectroscopy. The nuclear Overhauser effect intensities of the three-dimensional nuclear Overhauser spectra were used directly in the calculations. The overall folding of histactophilin is similar to that of interleukin-1 beta and fibroblast growth factor, but the primary amino-acid sequence of hisactophilin is unrelated to these two proteins.
 

Literature references that cite this PDB file's key reference

  PubMed id Reference
18438682 M.Schleicher, and B.M.Jockusch (2008).
Actin: its cumbersome pilgrimage through cellular compartments.
  Histochem Cell Biol, 129, 695-704.  
  17277441 N.Kulahin, V.Kiselyov, A.Kochoyan, O.Kristensen, J.S.Kastrup, V.Berezin, E.Bock, and M.Gajhede (2007).
Structure of rat acidic fibroblast growth factor at 1.4 A resolution.
  Acta Crystallogr Sect F Struct Biol Cryst Commun, 63, 65-68.
PDB code: 2j3p
16801558 L.L.Chavez, S.Gosavi, P.A.Jennings, and J.N.Onuchic (2006).
Multiple routes lead to the native state in the energy landscape of the beta-trefoil family.
  Proc Natl Acad Sci U S A, 103, 10254-10258.  
16091369 E.A.Nordahl, V.Rydengård, M.Mörgelin, and A.Schmidtchen (2005).
Domain 5 of high molecular weight kininogen is antibacterial.
  J Biol Chem, 280, 34832-34839.  
15687495 J.M.Mancheño, H.Tateno, I.J.Goldstein, M.Martínez-Ripoll, and J.A.Hermoso (2005).
Structural analysis of the Laetiporus sulphureus hemolytic pore-forming lectin in complex with sugars.
  J Biol Chem, 280, 17251-17259.
PDB codes: 1w3a 1w3f 1w3g
15382229 M.J.Bernett, T.Somasundaram, and M.Blaber (2004).
An atomic resolution structure for human fibroblast growth factor 1.
  Proteins, 57, 626-634.
PDB code: 1rg8
14627732 S.R.Brych, J.Kim, T.M.Logan, and M.Blaber (2003).
Accommodation of a highly symmetric core within a symmetric protein superfold.
  Protein Sci, 12, 2704-2718.
PDB codes: 1jy0 1m16 1nzk 1p63
11847289 C.Liu, J.A.Gaspar, H.J.Wong, and E.M.Meiering (2002).
Conserved and nonconserved features of the folding pathway of hisactophilin, a beta-trefoil protein.
  Protein Sci, 11, 669-679.  
11802717 R.S.Houliston, C.Liu, L.M.Singh, and E.M.Meiering (2002).
pH and urea dependence of amide hydrogen-deuterium exchange rates in the beta-trefoil protein hisactophilin.
  Biochemistry, 41, 1182-1194.  
11300762 C.Liu, D.Chu, R.D.Wideman, R.S.Houliston, H.J.Wong, and E.M.Meiering (2001).
Thermodynamics of denaturation of hisactophilin, a beta-trefoil protein.
  Biochemistry, 40, 3817-3827.  
11714927 S.R.Brych, S.I.Blaber, T.M.Logan, and M.Blaber (2001).
Structure and stability effects of mutations designed to increase the primary sequence symmetry within the core region of a beta-trefoil.
  Protein Sci, 10, 2587-2599.
PDB codes: 1jqz 1jt3 1jt4 1jt5 1jt7 1jtc
10819977 Y.Lin, R.A.Pixley, and R.W.Colman (2000).
Kinetic analysis of the role of zinc in the interaction of domain 5 of high-molecular weight kininogen (HK) with heparin.
  Biochemistry, 39, 5104-5110.  
10748229 Y.Liu, A.J.Chirino, Z.Misulovin, C.Leteux, T.Feizi, M.C.Nussenzweig, and P.J.Bjorkman (2000).
Crystal structure of the cysteine-rich domain of mannose receptor complexed with a sulfated carbohydrate ligand.
  J Exp Med, 191, 1105-1116.
PDB codes: 1dqg 1dqo
9634702 F.Vallée, A.Kadziola, Y.Bourne, M.Juy, K.W.Rodenburg, B.Svensson, and R.Haser (1998).
Barley alpha-amylase bound to its endogenous protein inhibitor BASI: crystal structure of the complex at 1.9 A resolution.
  Structure, 6, 649-659.
PDB code: 1ava
9334739 T.R.Transue, A.K.Smith, H.Mo, I.J.Goldstein, and M.A.Saper (1997).
Structure of benzyl T-antigen disaccharide bound to Amaranthus caudatus agglutinin.
  Nat Struct Biol, 4, 779-783.
PDB codes: 1jlx 1jly
8842219 C.Naumann, C.Dietrich, A.Behrisch, T.Bayerl, M.Schleicher, D.Bucknall, and E.Sackmann (1996).
Hisactophilin-mediated binding of actin to lipid lamellae: a neutron reflectivity study of protein membrane coupling.
  Biophys J, 71, 811-823.  
  8670794 F.Hanakam, R.Albrecht, C.Eckerskorn, M.Matzner, and G.Gerisch (1996).
Myristoylated and non-myristoylated forms of the pH sensor protein hisactophilin II: intracellular shuttling to plasma membrane and nucleus monitored in real time by a fusion with green fluorescent protein.
  EMBO J, 15, 2935-2943.  
8536801 A.A.Noegel, and J.E.Luna (1995).
The Dictyostelium cytoskeleton.
  Experientia, 51, 1135-1143.  
7822284 F.Hanakam, C.Eckerskorn, F.Lottspeich, A.Müller-Taubenberger, W.Schäfer, and G.Gerish (1995).
The pH-sensitive actin-binding protein hisactophilin of Dictyostelium exists in two isoforms which both are myristoylated and distributed between plasma membrane and cytoplasm.
  J Biol Chem, 270, 596-602.  
7867645 H.A.Schreuder, J.M.Rondeau, C.Tardif, A.Soffientini, E.Sarubbi, A.Akeson, T.L.Bowlin, S.Yanofsky, and R.W.Barrett (1995).
Refined crystal structure of the interleukin-1 receptor antagonist. Presence of a disulfide link and a cis-proline.
  Eur J Biochem, 227, 838-847.
PDB code: 1ilr
7665610 H.Zhu, K.Ramnarayan, J.Anchin, W.Y.Miao, A.Sereno, L.Millman, J.Zheng, V.N.Balaji, and M.E.Wolff (1995).
Glu-96 of basic fibroblast growth factor is essential for high affinity receptor binding. Identification by structure-based site-directed mutagenesis.
  J Biol Chem, 270, 21869-21874.  
7499244 U.Kavita, and S.B.Mizel (1995).
Differential sensitivity of interleukin-1 alpha and -beta precursor proteins to cleavage by calpain, a calcium-dependent protease.
  J Biol Chem, 270, 27758-27765.  
7608192 W.M.Siders, and S.B.Mizel (1995).
Interleukin-1 beta secretion. A possible multistep process that is regulated in a cell type-specific manner.
  J Biol Chem, 270, 16258-16264.  
  7691311 A.E.Eriksson, L.S.Cousens, and B.W.Matthews (1993).
Refinement of the structure of human basic fibroblast growth factor at 1.6 A resolution and analysis of presumed heparin binding sites by selenate substitution.
  Protein Sci, 2, 1274-1284.
PDB codes: 1fga 4fgf
8269922 M.Czisch, M.Schleicher, S.Hörger, W.Voelter, and T.A.Holak (1993).
Conformation of thymosin beta 4 in water determined by NMR spectroscopy.
  Eur J Biochem, 218, 335-344.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB code is shown on the right.

 

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