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PDBsum entry 1guh
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Contents |
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* Residue conservation analysis
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Enzyme class 2:
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E.C.1.11.1.-
- ?????
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Enzyme class 3:
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E.C.2.5.1.18
- glutathione transferase.
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Reaction:
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RX + glutathione = an S-substituted glutathione + a halide anion + H+
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RX
Bound ligand (Het Group name = )
matches with 74.07% similarity
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+
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glutathione
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=
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S-substituted glutathione
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+
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halide anion
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+
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H(+)
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Enzyme class 4:
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E.C.5.3.3.-
- ?????
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Note, where more than one E.C. class is given (as above), each may
correspond to a different protein domain or, in the case of polyprotein
precursors, to a different mature protein.
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Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
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J Mol Biol
232:192-212
(1993)
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PubMed id:
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Structure determination and refinement of human alpha class glutathione transferase A1-1, and a comparison with the Mu and Pi class enzymes.
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I.Sinning,
G.J.Kleywegt,
S.W.Cowan,
P.Reinemer,
H.W.Dirr,
R.Huber,
G.L.Gilliland,
R.N.Armstrong,
X.Ji,
P.G.Board.
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ABSTRACT
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The crystal structure of human alpha class glutathione transferase A1-1 has been
determined and refined to a resolution of 2.6 A. There are two copies of the
dimeric enzyme in the asymmetric unit. Each monomer is built from two domains. A
bound inhibitor, S-benzyl-glutathione, is primarily associated with one of these
domains via a network of hydrogen bonds and salt-links. In particular, the
sulphur atom of the inhibitor forms a hydrogen bond to the hydroxyl group of
Tyr9 and the guanido group of Arg15. The benzyl group of the inhibitor is
completely buried in a hydrophobic pocket. The structure shows an overall
similarity to the mu and pi class enzymes particularly in the
glutathione-binding domain". The main difference concerns the extended C
terminus of the alpha class enzyme which forms an extra alpha-helix that blocks
one entrance to the active site and makes up part of the substrate binding site.
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Literature references that cite this PDB file's key reference
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PubMed id
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Reference
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A.F.Thévenin,
C.L.Zony,
B.J.Bahnson,
and
R.F.Colman
(2011).
GSTpi modulates JNK activity through a direct interaction with JNK substrate, ATF2.
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Protein Sci,
20,
834-848.
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A.J.Ketterman,
C.Saisawang,
and
J.Wongsantichon
(2011).
Insect glutathione transferases.
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Drug Metab Rev,
43,
253-265.
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A.Oakley
(2011).
Glutathione transferases: a structural perspective.
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Drug Metab Rev,
43,
138-151.
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C.Tuzmen,
and
B.Erman
(2011).
Identification of ligand binding sites of proteins using the gaussian network model.
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PLoS One,
6,
e16474.
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L.G.Higgins,
and
J.D.Hayes
(2011).
Mechanisms of induction of cytosolic and microsomal glutathione transferase (GST) genes by xenobiotics and pro-inflammatory agents.
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Drug Metab Rev,
43,
92.
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L.M.Balogh,
and
W.M.Atkins
(2011).
Interactions of glutathione transferases with 4-hydroxynonenal.
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Drug Metab Rev,
43,
165-178.
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L.M.Balogh,
I.Le Trong,
K.A.Kripps,
L.M.Shireman,
R.E.Stenkamp,
W.Zhang,
B.Mannervik,
and
W.M.Atkins
(2010).
Substrate specificity combined with stereopromiscuity in glutathione transferase A4-4-dependent metabolism of 4-hydroxynonenal.
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Biochemistry,
49,
1541-1548.
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PDB codes:
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M.A.Wouters,
S.W.Fan,
and
N.L.Haworth
(2010).
Disulfides as redox switches: from molecular mechanisms to functional significance.
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Antioxid Redox Signal,
12,
53-91.
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S.P.Singh,
L.Zimniak,
and
P.Zimniak
(2010).
The human hGSTA5 gene encodes an enzymatically active protein.
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Biochim Biophys Acta,
1800,
16-22.
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B.D.Persson,
S.Müller,
D.M.Reiter,
B.B.Schmitt,
M.Marttila,
C.V.Sumowski,
S.Schweizer,
U.Scheu,
C.Ochsenfeld,
N.Arnberg,
and
T.Stehle
(2009).
An arginine switch in the species B adenovirus knob determines high-affinity engagement of cellular receptor CD46.
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J Virol,
83,
673-686.
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PDB codes:
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H.J.Atkinson,
and
P.C.Babbitt
(2009).
Glutathione transferases are structural and functional outliers in the thioredoxin fold.
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Biochemistry,
48,
11108-11116.
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I.Axarli,
P.Dhavala,
A.C.Papageorgiou,
and
N.E.Labrou
(2009).
Crystal structure of Glycine max glutathione transferase in complex with glutathione: investigation of the mechanism operating by the Tau class glutathione transferases.
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Biochem J,
422,
247-256.
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PDB code:
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L.M.Balogh,
I.Le Trong,
K.A.Kripps,
K.Tars,
R.E.Stenkamp,
B.Mannervik,
and
W.M.Atkins
(2009).
Structural analysis of a glutathione transferase A1-1 mutant tailored for high catalytic efficiency with toxic alkenals.
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Biochemistry,
48,
7698-7704.
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PDB codes:
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D.F.Dourado,
P.A.Fernandes,
B.Mannervik,
and
M.J.Ramos
(2008).
Glutathione transferase: new model for glutathione activation.
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Chemistry,
14,
9591-9598.
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E.Connell,
P.Scott,
and
B.Davletov
(2008).
Real-time assay for monitoring membrane association of lipid-binding domains.
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Anal Biochem,
377,
83-88.
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L.M.Balogh,
A.G.Roberts,
L.M.Shireman,
R.J.Greene,
and
W.M.Atkins
(2008).
The stereochemical course of 4-hydroxy-2-nonenal metabolism by glutathione S-transferases.
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J Biol Chem,
283,
16702-16710.
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N.Kinsley,
Y.Sayed,
S.Mosebi,
R.N.Armstrong,
and
H.W.Dirr
(2008).
Characterization of the binding of 8-anilinonaphthalene sulfonate to rat class Mu GST M1-1.
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Biophys Chem,
137,
100-104.
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Y.C.Huang,
S.Misquitta,
S.Y.Blond,
E.Adams,
and
R.F.Colman
(2008).
Catalytically Active Monomer of Glutathione S-Transferase {pi} and Key Residues Involved in the Electrostatic Interaction between Subunits.
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J Biol Chem,
283,
32880-32888.
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B.Blanchette,
X.Feng,
and
B.R.Singh
(2007).
Marine glutathione S-transferases.
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Mar Biotechnol (NY),
9,
513-542.
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E.Grahn,
M.Novotny,
E.Jakobsson,
A.Gustafsson,
L.Grehn,
B.Olin,
D.Madsen,
M.Wahlberg,
B.Mannervik,
and
G.J.Kleywegt
(2006).
New crystal structures of human glutathione transferase A1-1 shed light on glutathione binding and the conformation of the C-terminal helix.
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Acta Crystallogr D Biol Crystallogr,
62,
197-207.
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PDB codes:
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J.L.Hearne,
and
R.F.Colman
(2006).
Contribution of the mu loop to the structure and function of rat glutathione transferase M1-1.
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Protein Sci,
15,
1277-1289.
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S.Hederos,
L.Tegler,
J.Carlsson,
B.Persson,
J.Viljanen,
and
K.S.Broo
(2006).
A promiscuous glutathione transferase transformed into a selective thiolester hydrolase.
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Org Biomol Chem,
4,
90-97.
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W.Q.Liao,
X.F.Liang,
L.Wang,
L.M.Lei,
and
B.P.Han
(2006).
Molecular cloning and characterization of alpha-class glutathione S-transferase gene from the liver of silver carp, bighead carp, and other major Chinese freshwater fishes.
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J Biochem Mol Toxicol,
20,
114-126.
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D.J.Schuller,
Q.Liu,
I.A.Kriksunov,
A.M.Campbell,
J.Barrett,
P.M.Brophy,
and
Q.Hao
(2005).
Crystal structure of a new class of glutathione transferase from the model human hookworm nematode Heligmosomoides polygyrus.
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Proteins,
61,
1024-1031.
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PDB code:
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F.Angelucci,
P.Baiocco,
M.Brunori,
L.Gourlay,
V.Morea,
and
A.Bellelli
(2005).
Insights into the catalytic mechanism of glutathione S-transferase: the lesson from Schistosoma haematobium.
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Structure,
13,
1241-1246.
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H.W.Dirr,
T.Little,
D.C.Kuhnert,
and
Y.Sayed
(2005).
A conserved N-capping motif contributes significantly to the stabilization and dynamics of the C-terminal region of class Alpha glutathione S-transferases.
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J Biol Chem,
280,
19480-19487.
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P.Koivunen,
K.E.Salo,
J.Myllyharju,
and
L.W.Ruddock
(2005).
Three binding sites in protein-disulfide isomerase cooperate in collagen prolyl 4-hydroxylase tetramer assembly.
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J Biol Chem,
280,
5227-5235.
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S.Hederos,
and
L.Baltzer
(2005).
Nucleophile selectivity in the acyl transfer reaction of a designed enzyme.
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Biopolymers,
79,
292-299.
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L.A.Ralat,
and
R.F.Colman
(2004).
Glutathione S-transferase Pi has at least three distinguishable xenobiotic substrate sites close to its glutathione-binding site.
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J Biol Chem,
279,
50204-50213.
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M.A.Vargo,
and
R.F.Colman
(2004).
Heterodimers of wild-type and subunit interface mutant enzymes of glutathione S-transferase A1-1: interactive or independent active sites?
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Protein Sci,
13,
1586-1593.
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M.Perbandt,
C.Burmeister,
R.D.Walter,
C.Betzel,
and
E.Liebau
(2004).
Native and inhibited structure of a Mu class-related glutathione S-transferase from Plasmodium falciparum.
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J Biol Chem,
279,
1336-1342.
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PDB codes:
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N.Tetlow,
M.Coggan,
M.G.Casarotto,
and
P.G.Board
(2004).
Functional polymorphism of human glutathione transferase A3: effects on xenobiotic metabolism and steroid biosynthesis.
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Pharmacogenetics,
14,
657-663.
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N.Tetlow,
and
P.G.Board
(2004).
Functional polymorphism of human glutathione transferase A2.
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Pharmacogenetics,
14,
111-116.
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S.Hederos,
K.S.Broo,
E.Jakobsson,
G.J.Kleywegt,
B.Mannervik,
and
L.Baltzer
(2004).
Incorporation of a single His residue by rational design enables thiol-ester hydrolysis by human glutathione transferase A1-1.
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Proc Natl Acad Sci U S A,
101,
13163-13167.
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PDB code:
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U.M.Hegazy,
B.Mannervik,
and
G.Stenberg
(2004).
Functional role of the lock and key motif at the subunit interface of glutathione transferase p1-1.
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J Biol Chem,
279,
9586-9596.
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G.K.Kong,
G.Polekhina,
W.J.McKinstry,
M.W.Parker,
B.Dragani,
A.Aceto,
D.Paludi,
D.R.Principe,
B.Mannervik,
and
G.Stenberg
(2003).
Contribution of glycine 146 to a conserved folding module affecting stability and refolding of human glutathione transferase p1-1.
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J Biol Chem,
278,
1291-1302.
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PDB codes:
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K.Fritz-Wolf,
A.Becker,
S.Rahlfs,
P.Harwaldt,
R.H.Schirmer,
W.Kabsch,
and
K.Becker
(2003).
X-ray structure of glutathione S-transferase from the malarial parasite Plasmodium falciparum.
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Proc Natl Acad Sci U S A,
100,
13821-13826.
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PDB code:
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L.A.Ralat,
and
R.F.Colman
(2003).
Monobromobimane occupies a distinct xenobiotic substrate site in glutathione S-transferase pi.
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Protein Sci,
12,
2575-2587.
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M.G.Jeppesen,
P.Ortiz,
W.Shepard,
T.G.Kinzy,
J.Nyborg,
and
G.R.Andersen
(2003).
The crystal structure of the glutathione S-transferase-like domain of elongation factor 1Bgamma from Saccharomyces cerevisiae.
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J Biol Chem,
278,
47190-47198.
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PDB code:
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R.E.Laliberte,
D.G.Perregaux,
L.R.Hoth,
P.J.Rosner,
C.K.Jordan,
K.M.Peese,
J.F.Eggler,
M.A.Dombroski,
K.F.Geoghegan,
and
C.A.Gabel
(2003).
Glutathione s-transferase omega 1-1 is a target of cytokine release inhibitory drugs and may be responsible for their effect on interleukin-1beta posttranslational processing.
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J Biol Chem,
278,
16567-16578.
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R.M.Cardoso,
D.S.Daniels,
C.M.Bruns,
and
J.A.Tainer
(2003).
Characterization of the electrophile binding site and substrate binding mode of the 26-kDa glutathione S-transferase from Schistosoma japonicum.
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Proteins,
51,
137-146.
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PDB codes:
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S.Mosebi,
Y.Sayed,
J.Burke,
and
H.W.Dirr
(2003).
Residue 219 impacts on the dynamics of the C-terminal region in glutathione transferase A1-1: implications for stability and catalytic and ligandin functions.
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Biochemistry,
42,
15326-15332.
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A.S.Johansson,
and
B.Mannervik
(2002).
Active-site residues governing high steroid isomerase activity in human glutathione transferase A3-3.
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J Biol Chem,
277,
16648-16654.
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I.Le Trong,
R.E.Stenkamp,
C.Ibarra,
W.M.Atkins,
and
E.T.Adman
(2002).
1.3-A resolution structure of human glutathione S-transferase with S-hexyl glutathione bound reveals possible extended ligandin binding site.
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Proteins,
48,
618-627.
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PDB codes:
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J.K.Luo,
J.A.Hornby,
L.A.Wallace,
J.Chen,
R.N.Armstrong,
and
H.W.Dirr
(2002).
Impact of domain interchange on conformational stability and equilibrium folding of chimeric class micro glutathione transferases.
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Protein Sci,
11,
2208-2217.
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P.Harwaldt,
S.Rahlfs,
and
K.Becker
(2002).
Glutathione S-transferase of the malarial parasite Plasmodium falciparum: characterization of a potential drug target.
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Biol Chem,
383,
821-830.
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P.L.Pettersson,
A.S.Johansson,
and
B.Mannervik
(2002).
Transmutation of human glutathione transferase A2-2 with peroxidase activity into an efficient steroid isomerase.
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J Biol Chem,
277,
30019-30022.
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A.J.Oakley,
T.Harnnoi,
R.Udomsinprasert,
K.Jirajaroenrat,
A.J.Ketterman,
and
M.C.Wilce
(2001).
The crystal structures of glutathione S-transferases isozymes 1-3 and 1-4 from Anopheles dirus species B.
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Protein Sci,
10,
2176-2185.
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PDB codes:
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B.S.Nieslanik,
C.Ibarra,
and
W.M.Atkins
(2001).
The C-terminus of glutathione S-transferase A1-1 is required for entropically-driven ligand binding.
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Biochemistry,
40,
3536-3543.
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C.Ibarra,
B.S.Nieslanik,
and
W.M.Atkins
(2001).
Contribution of aromatic-aromatic interactions to the anomalous pK(a) of tyrosine-9 and the C-terminal dynamics of glutathione S-transferase A1-1.
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Biochemistry,
40,
10614-10624.
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E.T.Adman,
I.Le Trong,
R.E.Stenkamp,
B.S.Nieslanik,
E.C.Dietze,
G.Tai,
C.Ibarra,
and
W.M.Atkins
(2001).
Localization of the C-terminus of rat glutathione S-transferase A1-1: crystal structure of mutants W21F and W21F/F220Y.
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Proteins,
42,
192-200.
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PDB codes:
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G.Stenberg,
B.Dragani,
R.Cocco,
B.Mannervik,
and
A.Aceto
(2000).
A conserved "hydrophobic staple motif" plays a crucial role in the refolding of human glutathione transferase P1-1.
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| |
J Biol Chem,
275,
10421-10428.
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I.Schmidt-Krey,
K.Mitsuoka,
T.Hirai,
K.Murata,
Y.Cheng,
Y.Fujiyoshi,
R.Morgenstern,
and
H.Hebert
(2000).
The three-dimensional map of microsomal glutathione transferase 1 at 6 A resolution.
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| |
EMBO J,
19,
6311-6316.
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J.U.Flanagan,
W.King,
M.W.Parker,
P.G.Board,
and
G.Chelvanayagam
(2000).
Ab initio calculations on hidden modulators of theta class glutathione transferase activity.
|
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Proteins,
39,
235-243.
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J.Wang,
S.Bauman,
and
R.F.Colman
(2000).
Probing subunit interactions in alpha class rat liver glutathione S-transferase with the photoaffinity label glutathionyl S-[4-(succinimidyl)benzophenone].
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| |
J Biol Chem,
275,
5493-5503.
|
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L.O.Nilsson,
A.Gustafsson,
and
B.Mannervik
(2000).
Redesign of substrate-selectivity determining modules of glutathione transferase A1-1 installs high catalytic efficiency with toxic alkenal products of lipid peroxidation.
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| |
Proc Natl Acad Sci U S A,
97,
9408-9412.
|
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M.Ishigai,
J.I.Langridge,
R.S.Bordoli,
and
S.J.Gaskell
(2000).
Noncovalent associations of glutathione S-transferase and ligands: a study using electrospray quadrupole/time-of-flight mass spectrometry.
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| |
J Am Soc Mass Spectrom,
11,
606-614.
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P.C.Babbitt
(2000).
Reengineering the glutathione S-transferase scaffold: a rational design strategy pays off.
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| |
Proc Natl Acad Sci U S A,
97,
10298-10300.
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S.A.McCallum,
T.K.Hitchens,
C.Torborg,
and
G.S.Rule
(2000).
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PDB code:
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|
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|
PDB code:
|
 |
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|
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|
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P.Bico,
J.Erhardt,
W.Kaplan,
and
H.Dirr
(1995).
Porcine class pi glutathione S-transferase: anionic ligand binding and conformational analysis.
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Biochim Biophys Acta,
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R.Björnestedt,
S.Tardioli,
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(1995).
The high activity of rat glutathione transferase 8-8 with alkene substrates is dependent on a glycine residue in the active site.
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J Biol Chem,
270,
29705-29709.
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E.V.Koonin,
A.R.Mushegian,
R.L.Tatusov,
S.F.Altschul,
S.H.Bryant,
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(1994).
Eukaryotic translation elongation factor 1 gamma contains a glutathione transferase domain--study of a diverse, ancient protein superfamily using motif search and structural modeling.
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Protein Sci,
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Biol Chem Hoppe Seyler,
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H.Dirr,
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X-ray crystal structures of cytosolic glutathione S-transferases. Implications for protein architecture, substrate recognition and catalytic function.
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Eur J Biochem,
220,
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K.Berhane,
M.Widersten,
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Detoxication of base propenals and other alpha, beta-unsaturated aldehyde products of radical reactions and lipid peroxidation by human glutathione transferases.
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Proc Natl Acad Sci U S A,
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F.Rüker,
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Three-dimensional structure of Schistosoma japonicum glutathione S-transferase fused with a six-amino acid conserved neutralizing epitope of gp41 from HIV.
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Protein Sci,
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PDB code:
|
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K.Zeng,
J.P.Rose,
H.C.Chen,
C.L.Strickland,
C.P.Tu,
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A surface mutant (G82R) of a human alpha-glutathione S-transferase shows decreased thermal stability and a new mode of molecular association in the crystal.
|
| |
Proteins,
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|
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|
PDB code:
|
 |
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|
|
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|
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P.Zimniak,
B.Nanduri,
S.Pikuła,
J.Bandorowicz-Pikuła,
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S.Awasthi,
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Naturally occurring human glutathione S-transferase GSTP1-1 isoforms with isoleucine and valine in position 104 differ in enzymic properties.
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Eur J Biochem,
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Isolation and characterization of the Methylophilus sp. strain DM11 gene encoding dichloromethane dehalogenase/glutathione S-transferase.
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J Bacteriol,
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3466-3473.
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S.S.Tang,
C.C.Lin,
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G.G.Chang
(1994).
Isolation and characterization of octopus hepatopancreatic glutathione S-transferase. Comparison of digestive gland enzyme with lens S-crystallin.
|
| |
J Protein Chem,
13,
609-618.
|
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F.Martini,
A.Aceto,
P.Sacchetta,
T.Bucciarelli,
B.Dragani,
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Investigation of intra-domain and inter-domain interactions of glutathione transferase P1-1 by limited chymotryptic cleavage.
|
| |
Eur J Biochem,
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|
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R.W.Wang,
A.W.Bird,
D.J.Newton,
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Fluorescence characterization of Trp 21 in rat glutathione S-transferase 1-1: microconformational changes induced by S-hexyl glutathione.
|
| |
Protein Sci,
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2085-2094.
|
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|
 |
 |
|
The most recent references are shown first.
Citation data come partly from CiteXplore and partly
from an automated harvesting procedure. Note that this is likely to be
only a partial list as not all journals are covered by
either method. However, we are continually building up the citation data
so more and more references will be included with time.
Where a reference describes a PDB structure, the PDB
codes are
shown on the right.
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}
}
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