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PDBsum entry 1fwp

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Chemotaxis PDB id
1fwp

 

 

 

 

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Contents
Protein chain
69 a.a. *
* Residue conservation analysis
PDB id:
1fwp
Name: Chemotaxis
Title: Chey-binding domain of chea (residues 159-227), nmr, minimized average structure
Structure: Chea. Chain: a. Fragment: chey-binding domain, residues 159 - 227. Synonym: p2 domain of chea. Engineered: yes
Source: Escherichia coli. Organism_taxid: 562. Gene: chea (residues 124-257). Expressed in: tac promoter.
NMR struc: 1 models
Authors: M.M.Mcevoy,F.W.Dahlquist
Key ref:
M.M.McEvoy et al. (1996). Structure and dynamics of a CheY-binding domain of the chemotaxis kinase CheA determined by nuclear magnetic resonance spectroscopy. Biochemistry, 35, 5633-5640. PubMed id: 8639521 DOI: 10.1021/bi952707h
Date:
06-Feb-96     Release date:   11-Jul-96    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P07363  (CHEA_ECOLI) -  Chemotaxis protein CheA from Escherichia coli (strain K12)
Seq:
Struc:
 
Seq:
Struc:
654 a.a.
69 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.13.3  - histidine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: ATP + protein L-histidine = ADP + protein N-phospho-L-histidine
ATP
+ protein L-histidine
= ADP
+ protein N-phospho-L-histidine
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
DOI no: 10.1021/bi952707h Biochemistry 35:5633-5640 (1996)
PubMed id: 8639521  
 
 
Structure and dynamics of a CheY-binding domain of the chemotaxis kinase CheA determined by nuclear magnetic resonance spectroscopy.
M.M.McEvoy, D.R.Muhandiram, L.E.Kay, F.W.Dahlquist.
 
  ABSTRACT  
 
The Escherichia coli histidine autokinase CheA plays an important role in coupling signals received from membrane-bound receptors to changes in the swimming behavior of the cells in order to respond appropriately to environmental signals. Here we describe the structure of the 14 kDa fragment of the chemotaxis kinase CheA, residues 124--257, which binds to the downstream targets of phosphorylation, the response regulators CheY and CheB. This protein fragment contains the CheY-binding domain flanked on each side by regions that correspond to domain linkers in the intact protein. The structure of the domain was determined from 1429 restraints derived from heteronuclear multidimensional NMR experiments. Hybrid distance geometry--dynamical simulated annealing methods were used to calculate a family of structures that satisfy the experimental distance restraints and torsion angle restraints. The root mean square deviation of the 69 ordered residues in the domain is 0.52 A for the backbone heavy atoms and 0.99 A for all heavy atoms. The residues that have been implicated as important for CheY binding form a face consisting of several partially buried hydrophobic residues, framed by charged residues. The dynamic properties of this protein fragment were measured and analyzed using both isotropic and anisotropic models of molecular motion. The linker regions are very flexible and disordered, as evidenced by the very dynamics properties as compared to the CheY-binding domain. The CheY-binding domain of CheA is structurally similar to the histidine-containing phosphocarrier, HPr, which is a protein involved in the phosphoenolpyruvate:sugar phosphotransferase (PTS) pathway. This structural similarity suggests a possible evolutionary relationship of the PTS and chemotaxis pathways.
 

Literature references that cite this PDB file's key reference

  PubMed id Reference
21481780 K.Schmöe, V.V.Rogov, N.Y.Rogova, F.Löhr, P.Güntert, F.Bernhard, and V.Dötsch (2011).
Structural Insights into Rcs Phosphotransfer: The Newly Identified RcsD-ABL Domain Enhances Interaction with the Response Regulator RcsB.
  Structure, 19, 577-587.
PDB code: 2kx7
20355710 J.Bhatnagar, P.P.Borbat, A.M.Pollard, A.M.Bilwes, J.H.Freed, and B.R.Crane (2010).
Structure of the ternary complex formed by a chemotaxis receptor signaling domain, the CheA histidine kinase, and the coupling protein CheW as determined by pulsed dipolar ESR spectroscopy.
  Biochemistry, 49, 3824-3841.  
19505148 A.K.Eaton, and R.C.Stewart (2009).
The two active sites of Thermotoga maritima CheA dimers bind ATP with dramatically different affinities.
  Biochemistry, 48, 6412-6422.  
19256549 S.L.Gloor, and J.J.Falke (2009).
Thermal domain motions of CheA kinase in solution: Disulfide trapping reveals the motional constraints leading to trans-autophosphorylation.
  Biochemistry, 48, 3631-3644.  
16963640 L.Volpon, C.R.Young, A.Matte, and K.Gehring (2006).
NMR structure of the enzyme GatB of the galactitol-specific phosphoenolpyruvate-dependent phosphotransferase system and its interaction with GatA.
  Protein Sci, 15, 2435-2441.
PDB code: 1tvm
12486062 C.Birck, Y.Chen, F.M.Hulett, and J.P.Samama (2003).
The crystal structure of the phosphorylation domain in PhoP reveals a functional tandem association mediated by an asymmetric interface.
  J Bacteriol, 185, 254-261.
PDB code: 1mvo
12022879 G.S.Anand, and A.M.Stock (2002).
Kinetic basis for the stimulatory effect of phosphorylation on the methylesterase activity of CheB.
  Biochemistry, 41, 6752-6760.  
11799399 I.J.Griswold, H.Zhou, M.Matison, R.V.Swanson, L.P.McIntosh, M.I.Simon, and F.W.Dahlquist (2002).
The solution structure and interactions of CheW from Thermotoga maritima.
  Nat Struct Biol, 9, 121-125.
PDB code: 1k0s
11741839 R.B.Bourret, N.W.Charon, A.M.Stock, and A.H.West (2002).
Bright lights, abundant operons--fluorescence and genomic technologies advance studies of bacterial locomotion and signal transduction: review of the BLAST meeting, Cuernavaca, Mexico, 14 to 19 January 2001.
  J Bacteriol, 184, 1.  
11406410 A.H.West, and A.M.Stock (2001).
Histidine kinases and response regulator proteins in two-component signaling systems.
  Trends Biochem Sci, 26, 369-376.  
11134926 P.Gouet, N.Chinardet, M.Welch, V.Guillet, S.Cabantous, C.Birck, L.Mourey, and J.P.Samama (2001).
Further insights into the mechanism of function of the response regulator CheY from crystallographic studies of the CheY--CheA(124--257) complex.
  Acta Crystallogr D Biol Crystallogr, 57, 44-51.
PDB codes: 1ffg 1ffs 1ffw
10924144 J.A.Bornhorst, and J.J.Falke (2000).
Attractant regulation of the aspartate receptor-kinase complex: limited cooperative interactions between receptors and effects of the receptor modification state.
  Biochemistry, 39, 9486-9493.  
10981636 J.J.Falke, and S.H.Kim (2000).
Structure of a conserved receptor domain that regulates kinase activity: the cytoplasmic domain of bacterial taxis receptors.
  Curr Opin Struct Biol, 10, 462-469.  
9636149 M.M.McEvoy, A.C.Hausrath, G.B.Randolph, S.J.Remington, and F.W.Dahlquist (1998).
Two binding modes reveal flexibility in kinase/response regulator interactions in the bacterial chemotaxis pathway.
  Proc Natl Acad Sci U S A, 95, 7333-7338.
PDB code: 1eay
9687374 M.S.Jurica, and B.L.Stoddard (1998).
Mind your B's and R's: bacterial chemotaxis, signal transduction and protein recognition.
  Structure, 6, 809-813.  
9501159 M.Singh, B.Berger, P.S.Kim, J.M.Berger, and A.G.Cochran (1998).
Computational learning reveals coiled coil-like motifs in histidine kinase linker domains.
  Proc Natl Acad Sci U S A, 95, 2738-2743.  
9437425 M.Welch, N.Chinardet, L.Mourey, C.Birck, and J.P.Samama (1998).
Structure of the CheY-binding domain of histidine kinase CheA in complex with CheY.
  Nat Struct Biol, 5, 25-29.
PDB code: 1a0o
10066483 P.N.Goudreau, and A.M.Stock (1998).
Signal transduction in bacteria: molecular mechanisms of stimulus-response coupling.
  Curr Opin Microbiol, 1, 160-169.  
9442881 J.J.Falke, R.B.Bass, S.L.Butler, S.A.Chervitz, and M.A.Danielson (1997).
The two-component signaling pathway of bacterial chemotaxis: a molecular view of signal transduction by receptors, kinases, and adaptation enzymes.
  Annu Rev Cell Dev Biol, 13, 457-512.  
8989314 M.M.McEvoy, A.F.de la Cruz, and F.W.Dahlquist (1997).
Large modular proteins by NMR.
  Nat Struct Biol, 4, 9.  
9434897 M.M.McEvoy, and F.W.Dahlquist (1997).
Phosphohistidines in bacterial signaling.
  Curr Opin Struct Biol, 7, 793-797.  
8943256 M.Levit, Y.Liu, M.Surette, and J.Stock (1996).
Active site interference and asymmetric activation in the chemotaxis protein histidine kinase CheA.
  J Biol Chem, 271, 32057-32063.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB code is shown on the right.

 

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