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PDBsum entry 1fwp
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* Residue conservation analysis
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Enzyme class:
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E.C.2.7.13.3
- histidine kinase.
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Reaction:
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ATP + protein L-histidine = ADP + protein N-phospho-L-histidine
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ATP
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+
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protein L-histidine
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=
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ADP
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+
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protein N-phospho-L-histidine
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Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
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DOI no:
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Biochemistry
35:5633-5640
(1996)
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PubMed id:
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Structure and dynamics of a CheY-binding domain of the chemotaxis kinase CheA determined by nuclear magnetic resonance spectroscopy.
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M.M.McEvoy,
D.R.Muhandiram,
L.E.Kay,
F.W.Dahlquist.
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ABSTRACT
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The Escherichia coli histidine autokinase CheA plays an important role in
coupling signals received from membrane-bound receptors to changes in the
swimming behavior of the cells in order to respond appropriately to
environmental signals. Here we describe the structure of the 14 kDa fragment of
the chemotaxis kinase CheA, residues 124--257, which binds to the downstream
targets of phosphorylation, the response regulators CheY and CheB. This protein
fragment contains the CheY-binding domain flanked on each side by regions that
correspond to domain linkers in the intact protein. The structure of the domain
was determined from 1429 restraints derived from heteronuclear multidimensional
NMR experiments. Hybrid distance geometry--dynamical simulated annealing methods
were used to calculate a family of structures that satisfy the experimental
distance restraints and torsion angle restraints. The root mean square deviation
of the 69 ordered residues in the domain is 0.52 A for the backbone heavy atoms
and 0.99 A for all heavy atoms. The residues that have been implicated as
important for CheY binding form a face consisting of several partially buried
hydrophobic residues, framed by charged residues. The dynamic properties of this
protein fragment were measured and analyzed using both isotropic and anisotropic
models of molecular motion. The linker regions are very flexible and disordered,
as evidenced by the very dynamics properties as compared to the CheY-binding
domain. The CheY-binding domain of CheA is structurally similar to the
histidine-containing phosphocarrier, HPr, which is a protein involved in the
phosphoenolpyruvate:sugar phosphotransferase (PTS) pathway. This structural
similarity suggests a possible evolutionary relationship of the PTS and
chemotaxis pathways.
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Literature references that cite this PDB file's key reference
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PubMed id
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Reference
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K.Schmöe,
V.V.Rogov,
N.Y.Rogova,
F.Löhr,
P.Güntert,
F.Bernhard,
and
V.Dötsch
(2011).
Structural Insights into Rcs Phosphotransfer: The Newly Identified RcsD-ABL Domain Enhances Interaction with the Response Regulator RcsB.
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Structure,
19,
577-587.
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PDB code:
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J.Bhatnagar,
P.P.Borbat,
A.M.Pollard,
A.M.Bilwes,
J.H.Freed,
and
B.R.Crane
(2010).
Structure of the ternary complex formed by a chemotaxis receptor signaling domain, the CheA histidine kinase, and the coupling protein CheW as determined by pulsed dipolar ESR spectroscopy.
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Biochemistry,
49,
3824-3841.
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A.K.Eaton,
and
R.C.Stewart
(2009).
The two active sites of Thermotoga maritima CheA dimers bind ATP with dramatically different affinities.
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Biochemistry,
48,
6412-6422.
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S.L.Gloor,
and
J.J.Falke
(2009).
Thermal domain motions of CheA kinase in solution: Disulfide trapping reveals the motional constraints leading to trans-autophosphorylation.
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Biochemistry,
48,
3631-3644.
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L.Volpon,
C.R.Young,
A.Matte,
and
K.Gehring
(2006).
NMR structure of the enzyme GatB of the galactitol-specific phosphoenolpyruvate-dependent phosphotransferase system and its interaction with GatA.
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Protein Sci,
15,
2435-2441.
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PDB code:
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C.Birck,
Y.Chen,
F.M.Hulett,
and
J.P.Samama
(2003).
The crystal structure of the phosphorylation domain in PhoP reveals a functional tandem association mediated by an asymmetric interface.
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J Bacteriol,
185,
254-261.
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PDB code:
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G.S.Anand,
and
A.M.Stock
(2002).
Kinetic basis for the stimulatory effect of phosphorylation on the methylesterase activity of CheB.
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Biochemistry,
41,
6752-6760.
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I.J.Griswold,
H.Zhou,
M.Matison,
R.V.Swanson,
L.P.McIntosh,
M.I.Simon,
and
F.W.Dahlquist
(2002).
The solution structure and interactions of CheW from Thermotoga maritima.
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Nat Struct Biol,
9,
121-125.
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PDB code:
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R.B.Bourret,
N.W.Charon,
A.M.Stock,
and
A.H.West
(2002).
Bright lights, abundant operons--fluorescence and genomic technologies advance studies of bacterial locomotion and signal transduction: review of the BLAST meeting, Cuernavaca, Mexico, 14 to 19 January 2001.
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J Bacteriol,
184,
1.
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A.H.West,
and
A.M.Stock
(2001).
Histidine kinases and response regulator proteins in two-component signaling systems.
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Trends Biochem Sci,
26,
369-376.
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P.Gouet,
N.Chinardet,
M.Welch,
V.Guillet,
S.Cabantous,
C.Birck,
L.Mourey,
and
J.P.Samama
(2001).
Further insights into the mechanism of function of the response regulator CheY from crystallographic studies of the CheY--CheA(124--257) complex.
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Acta Crystallogr D Biol Crystallogr,
57,
44-51.
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PDB codes:
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J.A.Bornhorst,
and
J.J.Falke
(2000).
Attractant regulation of the aspartate receptor-kinase complex: limited cooperative interactions between receptors and effects of the receptor modification state.
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Biochemistry,
39,
9486-9493.
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J.J.Falke,
and
S.H.Kim
(2000).
Structure of a conserved receptor domain that regulates kinase activity: the cytoplasmic domain of bacterial taxis receptors.
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Curr Opin Struct Biol,
10,
462-469.
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M.M.McEvoy,
A.C.Hausrath,
G.B.Randolph,
S.J.Remington,
and
F.W.Dahlquist
(1998).
Two binding modes reveal flexibility in kinase/response regulator interactions in the bacterial chemotaxis pathway.
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Proc Natl Acad Sci U S A,
95,
7333-7338.
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PDB code:
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M.S.Jurica,
and
B.L.Stoddard
(1998).
Mind your B's and R's: bacterial chemotaxis, signal transduction and protein recognition.
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Structure,
6,
809-813.
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M.Singh,
B.Berger,
P.S.Kim,
J.M.Berger,
and
A.G.Cochran
(1998).
Computational learning reveals coiled coil-like motifs in histidine kinase linker domains.
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Proc Natl Acad Sci U S A,
95,
2738-2743.
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M.Welch,
N.Chinardet,
L.Mourey,
C.Birck,
and
J.P.Samama
(1998).
Structure of the CheY-binding domain of histidine kinase CheA in complex with CheY.
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Nat Struct Biol,
5,
25-29.
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PDB code:
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P.N.Goudreau,
and
A.M.Stock
(1998).
Signal transduction in bacteria: molecular mechanisms of stimulus-response coupling.
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Curr Opin Microbiol,
1,
160-169.
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J.J.Falke,
R.B.Bass,
S.L.Butler,
S.A.Chervitz,
and
M.A.Danielson
(1997).
The two-component signaling pathway of bacterial chemotaxis: a molecular view of signal transduction by receptors, kinases, and adaptation enzymes.
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Annu Rev Cell Dev Biol,
13,
457-512.
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M.M.McEvoy,
A.F.de la Cruz,
and
F.W.Dahlquist
(1997).
Large modular proteins by NMR.
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Nat Struct Biol,
4,
9.
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M.M.McEvoy,
and
F.W.Dahlquist
(1997).
Phosphohistidines in bacterial signaling.
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Curr Opin Struct Biol,
7,
793-797.
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M.Levit,
Y.Liu,
M.Surette,
and
J.Stock
(1996).
Active site interference and asymmetric activation in the chemotaxis protein histidine kinase CheA.
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J Biol Chem,
271,
32057-32063.
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The most recent references are shown first.
Citation data come partly from CiteXplore and partly
from an automated harvesting procedure. Note that this is likely to be
only a partial list as not all journals are covered by
either method. However, we are continually building up the citation data
so more and more references will be included with time.
Where a reference describes a PDB structure, the PDB
code is
shown on the right.
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