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PDBsum entry 1v5e

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protein ligands links
Oxidoreductase PDB id
1v5e

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
590 a.a. *
Ligands
SO4 ×4
FAD
Waters ×719
* Residue conservation analysis
PDB id:
1v5e
Name: Oxidoreductase
Title: Crystal structure of pyruvate oxidase containing fad, from aerococcus viridans
Structure: Pyruvate oxidase. Chain: a. Ec: 1.2.3.3
Source: Aerococcus viridans. Organism_taxid: 1377
Biol. unit: Tetramer (from PDB file)
Resolution:
1.60Å     R-factor:   0.231     R-free:   0.250
Authors: M.T.Hossain,K.Suzuki,T.Yamamoto,S.Imamura,T.Sekiguchi,A.Takenaka
Key ref: M.T.Hossain et al. Crystal structure of pyruvate oxidase containing FAD, From aerococcus viridans. To be published, .
Date:
22-Nov-03     Release date:   28-Jun-05    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
A9X9K8  (A9X9K8_9LACT) -  Pyruvate oxidase (Fragment) from Aerococcus viridans
Seq:
Struc:
 
Seq:
Struc:
592 a.a.
590 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 2 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.1.2.3.3  - pyruvate oxidase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: pyruvate + phosphate + O2 + H+ = acetyl phosphate + H2O2 + CO2
pyruvate
+ phosphate
+ O2
+ H(+)
= acetyl phosphate
+ H2O2
+ CO2
      Cofactor: FAD; Thiamine diphosphate
FAD
Bound ligand (Het Group name = FAD) corresponds exactly
Thiamine diphosphate
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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