data_ZWD # _chem_comp.id ZWD _chem_comp.name N-(4-aminobenzoyl)glycine _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H10 N2 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "Para-aminohippuric acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-04-10 _chem_comp.pdbx_modified_date 2023-10-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 194.187 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZWD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8SDY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZWD C10 C1 C 0 1 N N N N N N 66.764 65.321 72.398 -2.760 0.641 0.001 C10 ZWD 1 ZWD C01 C2 C 0 1 Y N N N N N 63.100 62.095 71.170 1.259 -0.927 0.006 C01 ZWD 2 ZWD C02 C3 C 0 1 Y N N N N N 62.591 61.099 70.353 2.547 -1.412 0.004 C02 ZWD 3 ZWD C03 C4 C 0 1 Y N N N N N 63.246 60.762 69.179 3.624 -0.530 -0.001 C03 ZWD 4 ZWD C04 C5 C 0 1 Y N N N N N 64.410 61.420 68.822 3.402 0.845 -0.003 C04 ZWD 5 ZWD C05 C6 C 0 1 Y N N N N N 64.920 62.416 69.638 2.116 1.335 -0.001 C05 ZWD 6 ZWD C06 C7 C 0 1 Y N N N N N 64.266 62.753 70.813 1.033 0.452 -0.002 C06 ZWD 7 ZWD C07 C8 C 0 1 N N N N N N 64.827 63.853 71.710 -0.347 0.975 -0.000 C07 ZWD 8 ZWD C11 C9 C 0 1 N N N N N N 67.291 66.461 71.530 -3.733 -0.510 -0.001 C11 ZWD 9 ZWD N09 N1 N 0 1 N N N N N N 66.208 64.275 71.557 -1.390 0.122 -0.001 N09 ZWD 10 ZWD N14 N2 N 0 1 N N N N N N 62.711 59.718 68.325 4.925 -1.022 -0.002 N14 ZWD 11 ZWD O08 O1 O 0 1 N N N N N N 64.135 64.357 72.529 -0.542 2.175 0.003 O08 ZWD 12 ZWD O12 O2 O 0 1 N N N N N N 66.543 67.427 71.228 -5.054 -0.271 0.001 O12 ZWD 13 ZWD O13 O3 O 0 1 N N N N N N 68.477 66.434 71.109 -3.325 -1.647 -0.003 O13 ZWD 14 ZWD H102 H1 H 0 0 N N N N N N 67.589 64.907 72.997 -2.919 1.252 -0.888 H102 ZWD 15 ZWD H101 H2 H 0 0 N N N N N N 65.981 65.705 73.068 -2.917 1.248 0.892 H101 ZWD 16 ZWD H011 H3 H 0 0 N N N N N N 62.589 62.358 72.084 0.424 -1.612 0.010 H011 ZWD 17 ZWD H021 H4 H 0 0 N N N N N N 61.683 60.585 70.631 2.723 -2.477 0.005 H021 ZWD 18 ZWD H041 H5 H 0 0 N N N N N N 64.920 61.157 67.907 4.240 1.527 -0.006 H041 ZWD 19 ZWD H051 H6 H 0 0 N N N N N N 65.828 62.930 69.359 1.945 2.402 -0.002 H051 ZWD 20 ZWD H091 H7 H 0 0 N N N N N N 66.783 63.840 70.864 -1.234 -0.835 -0.003 H091 ZWD 21 ZWD H142 H8 H 0 0 N N N N N N 61.873 59.352 68.730 5.081 -1.980 -0.000 H142 ZWD 22 ZWD H141 H9 H 0 0 N N N N N N 62.507 60.098 67.423 5.676 -0.408 -0.005 H141 ZWD 23 ZWD H1 H10 H 0 1 N N N N N N 67.022 68.041 70.684 -5.639 -1.042 -0.001 H1 ZWD 24 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZWD N14 C03 SING N N 1 ZWD C04 C03 DOUB Y N 2 ZWD C04 C05 SING Y N 3 ZWD C03 C02 SING Y N 4 ZWD C05 C06 DOUB Y N 5 ZWD C02 C01 DOUB Y N 6 ZWD C06 C01 SING Y N 7 ZWD C06 C07 SING N N 8 ZWD O13 C11 DOUB N N 9 ZWD O12 C11 SING N N 10 ZWD C11 C10 SING N N 11 ZWD N09 C07 SING N N 12 ZWD N09 C10 SING N N 13 ZWD C07 O08 DOUB N N 14 ZWD C10 H102 SING N N 15 ZWD C10 H101 SING N N 16 ZWD C01 H011 SING N N 17 ZWD C02 H021 SING N N 18 ZWD C04 H041 SING N N 19 ZWD C05 H051 SING N N 20 ZWD N09 H091 SING N N 21 ZWD N14 H142 SING N N 22 ZWD N14 H141 SING N N 23 ZWD O12 H1 SING N N 24 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZWD SMILES ACDLabs 12.01 O=C(NCC(=O)O)c1ccc(N)cc1 ZWD InChI InChI 1.06 InChI=1S/C9H10N2O3/c10-7-3-1-6(2-4-7)9(14)11-5-8(12)13/h1-4H,5,10H2,(H,11,14)(H,12,13) ZWD InChIKey InChI 1.06 HSMNQINEKMPTIC-UHFFFAOYSA-N ZWD SMILES_CANONICAL CACTVS 3.385 Nc1ccc(cc1)C(=O)NCC(O)=O ZWD SMILES CACTVS 3.385 Nc1ccc(cc1)C(=O)NCC(O)=O ZWD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 c1cc(ccc1C(=O)NCC(=O)O)N ZWD SMILES "OpenEye OEToolkits" 2.0.7 c1cc(ccc1C(=O)NCC(=O)O)N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZWD "SYSTEMATIC NAME" ACDLabs 12.01 N-(4-aminobenzoyl)glycine ZWD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[(4-aminophenyl)carbonylamino]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZWD 'Create component' 2023-04-10 RCSB ZWD 'Modify synonyms' 2023-04-10 RCSB ZWD 'Initial release' 2023-10-18 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id ZWD _pdbx_chem_comp_synonyms.name "Para-aminohippuric acid" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # _pdbe_chem_comp_drugbank_details.comp_id ZWD _pdbe_chem_comp_drugbank_details.drugbank_id DB00345 _pdbe_chem_comp_drugbank_details.type 'small molecule' _pdbe_chem_comp_drugbank_details.name 'Aminohippuric acid' _pdbe_chem_comp_drugbank_details.description 'The glycine amide of 4-aminobenzoic acid. Its sodium salt is used as a diagnostic aid to measure effective renal plasma flow (ERPF) and excretory capacity. [PubChem]' _pdbe_chem_comp_drugbank_details.cas_number 61-78-9 _pdbe_chem_comp_drugbank_details.mechanism_of_action 'Aminohippurate is filtered by the renal glomeruli and secreted into the urine by the proximal tubules. By measuring the amount of drug in the urine it is possible to determine functional capacity and effective renal plasma flow.' # loop_ _pdbe_chem_comp_synonyms.comp_id _pdbe_chem_comp_synonyms.name _pdbe_chem_comp_synonyms.provenance _pdbe_chem_comp_synonyms.type ZWD 'Para-aminohippuric acid' wwPDB ? ZWD '4-aminohippuric acid' DrugBank ? ZWD Aminohippurate DrugBank ? ZWD 'Aminohippuric acid' DrugBank ? ZWD 'N-(p-Aminobenzoyl)aminoacetic acid' DrugBank ? ZWD N-(p-Aminobenzoyl)glycine DrugBank ? ZWD N-(para-aminobenzoyl)glycine DrugBank ? ZWD p-aminohippurate DrugBank ? ZWD 'p-aminohippuric acid' DrugBank ? ZWD PAH DrugBank ? ZWD PAHA DrugBank ? ZWD para-aminohippurate DrugBank ? ZWD 'para-aminohippuric acid' DrugBank ? ZWD 'paraaminohippuric acid' DrugBank ? # _pdbe_chem_comp_drugbank_classification.comp_id ZWD _pdbe_chem_comp_drugbank_classification.drugbank_id DB00345 _pdbe_chem_comp_drugbank_classification.parent 'Hippuric acids' _pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds' _pdbe_chem_comp_drugbank_classification.class 'Benzene and substituted derivatives' _pdbe_chem_comp_drugbank_classification.superclass Benzenoids _pdbe_chem_comp_drugbank_classification.description 'This compound belongs to the class of organic compounds known as hippuric acids. These are compounds containing hippuric acid, which consists of a of a benzoyl group linked to the N-terminal of a glycine.' # _pdbe_chem_comp_drugbank_targets.comp_id ZWD _pdbe_chem_comp_drugbank_targets.drugbank_id DB00345 _pdbe_chem_comp_drugbank_targets.name 'Organic anion transporter 3' _pdbe_chem_comp_drugbank_targets.organism Humans _pdbe_chem_comp_drugbank_targets.uniprot_id Q8TCC7 _pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown _pdbe_chem_comp_drugbank_targets.ordinal 1 # loop_ _software.name _software.version _software.description rdkit 2025.03.3 'Core functionality.' pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.' # loop_ _pdbe_chem_comp_atom_depiction.comp_id _pdbe_chem_comp_atom_depiction.atom_id _pdbe_chem_comp_atom_depiction.element _pdbe_chem_comp_atom_depiction.model_Cartn_x _pdbe_chem_comp_atom_depiction.model_Cartn_y _pdbe_chem_comp_atom_depiction.pdbx_ordinal ZWD C10 C 5.598 3.000 1 ZWD C01 C 3.000 -1.500 2 ZWD C02 C 3.000 -3.000 3 ZWD C03 C 4.299 -3.750 4 ZWD C04 C 5.598 -3.000 5 ZWD C05 C 5.598 -1.500 6 ZWD C06 C 4.299 -0.750 7 ZWD C07 C 4.299 0.750 8 ZWD C11 C 6.897 3.750 9 ZWD N09 N 5.598 1.500 10 ZWD N14 N 4.299 -5.250 11 ZWD O08 O 3.000 1.500 12 ZWD O12 O 8.196 3.000 13 ZWD O13 O 6.897 5.250 14 # loop_ _pdbe_chem_comp_bond_depiction.comp_id _pdbe_chem_comp_bond_depiction.atom_id_1 _pdbe_chem_comp_bond_depiction.atom_id_2 _pdbe_chem_comp_bond_depiction.value_order _pdbe_chem_comp_bond_depiction.bond_dir _pdbe_chem_comp_bond_depiction.pdbx_ordinal ZWD N14 C03 SINGLE NONE 1 ZWD C04 C03 DOUBLE NONE 2 ZWD C04 C05 SINGLE NONE 3 ZWD C03 C02 SINGLE NONE 4 ZWD C05 C06 DOUBLE NONE 5 ZWD C02 C01 DOUBLE NONE 6 ZWD C06 C01 SINGLE NONE 7 ZWD C06 C07 SINGLE NONE 8 ZWD O13 C11 DOUBLE NONE 9 ZWD O12 C11 SINGLE NONE 10 ZWD C11 C10 SINGLE NONE 11 ZWD N09 C07 SINGLE NONE 12 ZWD N09 C10 SINGLE NONE 13 ZWD C07 O08 DOUBLE NONE 14 # loop_ _pdbe_chem_comp_substructure.comp_id _pdbe_chem_comp_substructure.substructure_name _pdbe_chem_comp_substructure.id _pdbe_chem_comp_substructure.substructure_type _pdbe_chem_comp_substructure.substructure_smiles _pdbe_chem_comp_substructure.substructure_inchis _pdbe_chem_comp_substructure.substructure_inchikeys ZWD MurckoScaffold S1 scaffold c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N ZWD amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N ZWD peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N ZWD phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N # loop_ _pdbe_chem_comp_substructure_mapping.comp_id _pdbe_chem_comp_substructure_mapping.atom_id _pdbe_chem_comp_substructure_mapping.substructure_id _pdbe_chem_comp_substructure_mapping.substructure_ordinal ZWD C01 S1 1 ZWD C02 S1 1 ZWD C03 S1 1 ZWD C04 S1 1 ZWD C05 S1 1 ZWD C06 S1 1 ZWD N09 F1 1 ZWD C07 F1 1 ZWD O08 F1 1 ZWD C06 F1 1 ZWD O13 F2 1 ZWD C11 F2 1 ZWD C10 F2 1 ZWD N09 F2 1 ZWD C01 F3 1 ZWD C02 F3 1 ZWD C03 F3 1 ZWD C04 F3 1 ZWD C05 F3 1 ZWD C06 F3 1 # _pdbe_chem_comp_rdkit_properties.comp_id ZWD _pdbe_chem_comp_rdkit_properties.exactmw 194.069 _pdbe_chem_comp_rdkit_properties.amw 194.190 _pdbe_chem_comp_rdkit_properties.lipinskiHBA 5 _pdbe_chem_comp_rdkit_properties.lipinskiHBD 4 _pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4 _pdbe_chem_comp_rdkit_properties.NumHBD 3 _pdbe_chem_comp_rdkit_properties.NumHBA 4 _pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 14 _pdbe_chem_comp_rdkit_properties.NumAtoms 24 _pdbe_chem_comp_rdkit_properties.NumHeteroatoms 5 _pdbe_chem_comp_rdkit_properties.NumAmideBonds 1 _pdbe_chem_comp_rdkit_properties.FractionCSP3 0.111 _pdbe_chem_comp_rdkit_properties.NumRings 1 _pdbe_chem_comp_rdkit_properties.NumAromaticRings 1 _pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0 _pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0 _pdbe_chem_comp_rdkit_properties.NumHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0 _pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0 _pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.labuteASA 94.844 _pdbe_chem_comp_rdkit_properties.tpsa 92.420 _pdbe_chem_comp_rdkit_properties.CrippenClogP -0.352 _pdbe_chem_comp_rdkit_properties.CrippenMR 49.733 _pdbe_chem_comp_rdkit_properties.chi0v 6.619 _pdbe_chem_comp_rdkit_properties.chi1v 3.283 _pdbe_chem_comp_rdkit_properties.chi2v 1.074 _pdbe_chem_comp_rdkit_properties.chi3v 1.074 _pdbe_chem_comp_rdkit_properties.chi4v 0.565 _pdbe_chem_comp_rdkit_properties.chi0n 16.619 _pdbe_chem_comp_rdkit_properties.chi1n 8.033 _pdbe_chem_comp_rdkit_properties.chi2n 1.074 _pdbe_chem_comp_rdkit_properties.chi3n 1.074 _pdbe_chem_comp_rdkit_properties.chi4n 0.565 _pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.040 _pdbe_chem_comp_rdkit_properties.kappa1 2.979 _pdbe_chem_comp_rdkit_properties.kappa2 4.268 _pdbe_chem_comp_rdkit_properties.kappa3 2.780 _pdbe_chem_comp_rdkit_properties.Phi 0.908 # loop_ _pdbe_chem_comp_external_mappings.comp_id _pdbe_chem_comp_external_mappings.source _pdbe_chem_comp_external_mappings.resource _pdbe_chem_comp_external_mappings.resource_id ZWD UniChem DrugBank DB00345 ZWD UniChem Selleck 4-aminohippuric-acid ZWD UniChem DrugCentral 165 ZWD UniChem MetaboLights MTBLC104011 ZWD UniChem BRENDA 211680 ZWD UniChem BRENDA 229748 ZWD UniChem BRENDA 229749 ZWD UniChem BRENDA 43415 ZWD UniChem rxnorm 'AMINOHIPPURATE SODIUM' ZWD UniChem CCDC LAYCET ZWD UniChem 'Guide to Pharmacology' 4810 ZWD UniChem ChEBI 104011 ZWD UniChem ZINC ZINC000000119344 ZWD UniChem eMolecules 476859 ZWD UniChem fdasrs Y79XT83BJ9 ZWD UniChem SureChEMBL SCHEMBL196513 ZWD UniChem PharmGKB PA134711723 ZWD UniChem HMDB HMDB0001867 ZWD UniChem 'PubChem TPHARMA' 15322330 ZWD UniChem PubChem 2148 ZWD UniChem Mcule MCULE-9532170257 ZWD UniChem NMRShiftDB 20033073 ZWD UniChem LINCS LSM-5739 ZWD UniChem ACTor 61-78-9 ZWD UniChem Nikkaji J38.133K ZWD UniChem BindingDb 50240008 ZWD UniChem 'EPA CompTox Dashboard' DTXSID7022590 ZWD UniChem BRENDA 153376 ZWD UniChem BRENDA 154359 ZWD UniChem BRENDA 51856 ZWD UniChem ChemicalBook CB5348161 ZWD UniChem ClinicalTrials 'AMINOHIPPURATE SODIUM' ZWD UniChem ClinicalTrials 'AMINOHIPPURIC ACID' ZWD UniChem ClinicalTrials 'P-AMINOHIPPURIC ACID' ZWD UniChem rxnorm '4-AMINOHIPPURIC ACID' ZWD UniChem MedChemExpress HY-B1306 ZWD UniChem 'Probes And Drugs' PD001092 # loop_ _pdbe_chem_comp_rdkit_conformer.comp_id _pdbe_chem_comp_rdkit_conformer.atom_id _pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit _pdbe_chem_comp_rdkit_conformer.rdkit_method _pdbe_chem_comp_rdkit_conformer.rdkit_ordinal ZWD C10 3.287 1.097 -0.229 ETKDGv3 1 ZWD C01 -0.914 -1.258 1.424 ETKDGv3 2 ZWD C02 -2.246 -1.373 1.484 ETKDGv3 3 ZWD C03 -3.108 -0.516 0.641 ETKDGv3 4 ZWD C04 -2.545 0.375 -0.189 ETKDGv3 5 ZWD C05 -1.074 0.503 -0.259 ETKDGv3 6 ZWD C06 -0.283 -0.265 0.515 ETKDGv3 7 ZWD C07 1.195 -0.167 0.453 ETKDGv3 8 ZWD C11 3.638 0.337 -1.468 ETKDGv3 9 ZWD N09 1.847 1.034 0.007 ETKDGv3 10 ZWD N14 -4.531 -0.645 0.711 ETKDGv3 11 ZWD O08 1.892 -1.153 0.819 ETKDGv3 12 ZWD O12 3.310 0.859 -2.715 ETKDGv3 13 ZWD O13 4.205 -0.785 -1.384 ETKDGv3 14 ZWD H102 3.835 0.693 0.650 ETKDGv3 15 ZWD H101 3.595 2.156 -0.363 ETKDGv3 16 ZWD H011 -0.299 -1.891 2.051 ETKDGv3 17 ZWD H021 -2.693 -2.098 2.154 ETKDGv3 18 ZWD H041 -3.160 1.007 -0.817 ETKDGv3 19 ZWD H051 -0.658 1.207 -0.967 ETKDGv3 20 ZWD H091 1.299 1.918 -0.090 ETKDGv3 21 ZWD H142 -4.968 -1.340 1.356 ETKDGv3 22 ZWD H141 -5.156 -0.049 0.123 ETKDGv3 23 ZWD H1 3.529 0.353 -3.564 ETKDGv3 24 #