data_ZGE
#
_chem_comp.id ZGE
_chem_comp.name '5-acetamido-2,6-anhydro-4-carbamimidamido-3,4,5-trideoxy-3-fluoro-D-glycero-D-galacto-non-2-enonic acid'
_chem_comp.type D-saccharide
_chem_comp.pdbx_type ATOMS
_chem_comp.formula 'C12 H19 F N4 O7'
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms
;(2R,3R,4R)-3-acetamido-4-carbamimidamido-5-fluoranyl-2-[(1R,2R)-1,2,3-tris(oxidanyl)propyl]-3,4-dihydro-2H-pyran-6-carb
 oxylic acid
;
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2012-10-31
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 350.300
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ZGE
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3W09
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
_chem_comp.pdbx_pcm Y
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id ZGE
_pdbx_chem_comp_synonyms.name
;(2R,3R,4R)-3-acetamido-4-carbamimidamido-5-fluoranyl-2-[(1R,2R)-1,2,3-tris(oxidanyl)propyl]-3,4-dihydro-2H-pyran-6-carb
 oxylic acid
;
_pdbx_chem_comp_synonyms.provenance PDB
_pdbx_chem_comp_synonyms.type ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ZGE O10 O10 O 0 1 N N N N N N 27.054 14.361 62.783 -1.724 2.819 -1.289 O10 ZGE 1
ZGE C10 C10 C 0 1 N N N N N N 26.998 14.824 61.645 -1.132 3.124 -0.275 C10 ZGE 2
ZGE C11 C11 C 0 1 N N N N N N 27.574 14.080 60.462 -1.224 4.532 0.255 C11 ZGE 3
ZGE N5 N5 N 0 1 N N N N N N 26.400 15.997 61.431 -0.398 2.204 0.380 N5 ZGE 4
ZGE C5 C5 C 0 1 N N R N N N 25.754 16.754 62.543 -0.314 0.834 -0.132 C5 ZGE 5
ZGE C4 C4 C 0 1 N N R N N N 24.225 16.663 62.346 -1.502 0.015 0.383 C4 ZGE 6
ZGE N4 N4 N 0 1 N N N N N N 23.827 15.276 62.594 -2.721 0.432 -0.315 N4 ZGE 7
ZGE C12 C12 C 0 1 N N N N N N 23.715 14.311 61.621 -3.948 0.254 0.279 C12 ZGE 8
ZGE N7 N7 N 0 1 N N N N N N 23.417 13.099 61.956 -4.031 -0.314 1.528 N7 ZGE 9
ZGE N6 N6 N 0 1 N N N N N N 23.891 14.585 60.307 -5.033 0.625 -0.342 N6 ZGE 10
ZGE C3 C3 C 0 1 N N N N N N 23.476 17.733 63.151 -1.253 -1.446 0.128 C3 ZGE 11
ZGE F1 F1 F 0 1 N N N N N N 22.143 17.686 63.196 -2.297 -2.303 0.167 F1 ZGE 12
ZGE C6 C6 C 0 1 N N R N N N 26.139 18.237 62.360 0.979 0.173 0.366 C6 ZGE 13
ZGE O6 O6 O 0 1 N N N N N N 25.444 19.085 63.304 1.065 -1.135 -0.204 O6 ZGE 14
ZGE C2 C2 C 0 1 N N N N N N 24.087 18.840 63.667 -0.039 -1.923 -0.136 C2 ZGE 15
ZGE C1 C1 C 0 1 N N N N N N 23.420 19.902 64.488 0.114 -3.365 -0.364 C1 ZGE 16
ZGE O1B O1B O 0 1 N N N N N N 24.034 20.997 64.655 1.331 -3.880 -0.634 O1B ZGE 17
ZGE O1A O1A O 0 1 N N N N N N 22.262 19.764 64.957 -0.857 -4.095 -0.310 O1A ZGE 18
ZGE C7 C7 C 0 1 N N R N N N 27.639 18.547 62.522 2.185 1.006 -0.071 C7 ZGE 19
ZGE O7 O7 O 0 1 N N N N N N 27.978 18.260 63.891 2.151 1.187 -1.488 O7 ZGE 20
ZGE C8 C8 C 0 1 N N R N N N 28.023 19.998 62.277 3.474 0.281 0.320 C8 ZGE 21
ZGE O8 O8 O 0 1 N N N N N N 27.613 20.353 60.966 3.509 0.100 1.737 O8 ZGE 22
ZGE C9 C9 C 0 1 N N N N N N 29.538 20.289 62.437 4.681 1.114 -0.117 C9 ZGE 23
ZGE O9 O9 O 0 1 N N N N N N 30.330 19.470 61.544 5.882 0.385 0.142 O9 ZGE 24
ZGE H1 H1 H 0 1 N N N N N N 28.011 13.130 60.803 -1.861 5.126 -0.400 H1 ZGE 25
ZGE H2 H2 H 0 1 N N N N N N 26.776 13.876 59.733 -1.650 4.515 1.258 H2 ZGE 26
ZGE H3 H3 H 0 1 N N N N N N 28.355 14.693 59.988 -0.228 4.972 0.291 H3 ZGE 27
ZGE H4 H4 H 0 1 N N N N N N 26.384 16.377 60.506 0.075 2.448 1.191 H4 ZGE 28
ZGE H5 H5 H 0 1 N N N N N N 26.055 16.379 63.532 -0.322 0.848 -1.222 H5 ZGE 29
ZGE H6 H6 H 0 1 N N N N N N 24.033 16.876 61.284 -1.622 0.182 1.453 H6 ZGE 30
ZGE H7 H7 H 0 1 N N N N N N 23.622 15.012 63.537 -2.662 0.833 -1.196 H7 ZGE 31
ZGE H8 H8 H 0 1 N N N N N N 23.269 12.868 62.918 -3.224 -0.590 1.990 H8 ZGE 32
ZGE H9 H9 H 0 1 N N N N N N 23.334 12.392 61.254 -4.897 -0.440 1.947 H9 ZGE 33
ZGE H10 H10 H 0 1 N N N N N N 24.105 15.549 60.151 -4.974 1.026 -1.223 H10 ZGE 34
ZGE H11 H11 H 0 1 N N N N N N 25.848 18.531 61.341 0.958 0.100 1.454 H11 ZGE 35
ZGE H13 H13 H 0 1 N N N N N N 28.213 17.901 61.842 2.152 1.979 0.420 H13 ZGE 36
ZGE H14 H14 H 0 1 N N N N N N 27.754 17.359 64.091 2.177 0.361 -1.991 H14 ZGE 37
ZGE H15 H15 H 0 1 N N N N N N 27.485 20.620 63.008 3.507 -0.692 -0.171 H15 ZGE 38
ZGE H16 H16 H 0 1 N N N N N N 26.685 20.176 60.865 3.482 0.926 2.239 H16 ZGE 39
ZGE H17 H17 H 0 1 N N N N N N 29.835 20.078 63.475 4.608 1.327 -1.184 H17 ZGE 40
ZGE H18 H18 H 0 1 N N N N N N 29.725 21.349 62.211 4.697 2.051 0.440 H18 ZGE 41
ZGE H19 H19 H 0 1 N N N N N N 31.251 19.669 61.664 6.689 0.854 -0.111 H19 ZGE 42
ZGE HO1B HO1B H 0 0 N N N N N N 23.485 21.596 65.148 1.381 -4.835 -0.776 HO1B ZGE 43
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ZGE N6 C12 DOUB N N 1
ZGE C11 C10 SING N N 2
ZGE O8 C8 SING N N 3
ZGE N5 C10 SING N N 4
ZGE N5 C5 SING N N 5
ZGE O9 C9 SING N N 6
ZGE C12 N7 SING N N 7
ZGE C12 N4 SING N N 8
ZGE C10 O10 DOUB N N 9
ZGE C8 C9 SING N N 10
ZGE C8 C7 SING N N 11
ZGE C4 C5 SING N N 12
ZGE C4 N4 SING N N 13
ZGE C4 C3 SING N N 14
ZGE C6 C7 SING N N 15
ZGE C6 C5 SING N N 16
ZGE C6 O6 SING N N 17
ZGE C7 O7 SING N N 18
ZGE C3 F1 SING N N 19
ZGE C3 C2 DOUB N N 20
ZGE O6 C2 SING N N 21
ZGE C2 C1 SING N N 22
ZGE C1 O1B SING N N 23
ZGE C1 O1A DOUB N N 24
ZGE C11 H1 SING N N 25
ZGE C11 H2 SING N N 26
ZGE C11 H3 SING N N 27
ZGE N5 H4 SING N N 28
ZGE C5 H5 SING N N 29
ZGE C4 H6 SING N N 30
ZGE N4 H7 SING N N 31
ZGE N7 H8 SING N N 32
ZGE N7 H9 SING N N 33
ZGE N6 H10 SING N N 34
ZGE C6 H11 SING N N 35
ZGE C7 H13 SING N N 36
ZGE O7 H14 SING N N 37
ZGE C8 H15 SING N N 38
ZGE O8 H16 SING N N 39
ZGE C9 H17 SING N N 40
ZGE C9 H18 SING N N 41
ZGE O9 H19 SING N N 42
ZGE O1B HO1B SING N N 43
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ZGE SMILES ACDLabs 12.01 'O=C(C)NC1C(N/C(N)=N)C(F)=C(OC1C(O)C(CO)O)C(O)=O'
ZGE InChI InChI 1.03 'InChI=1S/C12H19FN4O7/c1-3(19)16-7-6(17-12(14)15)5(13)9(11(22)23)24-10(7)8(21)4(20)2-18/h4,6-8,10,18,20-21H,2H2,1H3,(H,16,19)(H,22,23)(H4,14,15,17)/t4-,6+,7-,8-,10-/m1/s1'
ZGE InChIKey InChI 1.03 UCGICVWHWQNCDB-NSNFAWTCSA-N
ZGE SMILES_CANONICAL CACTVS 3.385 'CC(=O)N[C@@H]1[C@@H](NC(N)=N)C(=C(O[C@H]1[C@H](O)[C@H](O)CO)C(O)=O)F'
ZGE SMILES CACTVS 3.385 'CC(=O)N[CH]1[CH](NC(N)=N)C(=C(O[CH]1[CH](O)[CH](O)CO)C(O)=O)F'
ZGE SMILES_CANONICAL 'OpenEye OEToolkits' 2.0.7 '[H]/N=C(/N)\N[C@@H]1[C@H]([C@@H](OC(=C1F)C(=O)O)[C@@H]([C@@H](CO)O)O)NC(=O)C'
ZGE SMILES 'OpenEye OEToolkits' 2.0.7 'CC(=O)NC1C(C(=C(OC1C(C(CO)O)O)C(=O)O)F)NC(=N)N'
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ZGE 'SYSTEMATIC NAME' ACDLabs 12.01 '5-(acetylamino)-2,6-anhydro-4-carbamimidamido-3,4,5-trideoxy-3-fluoro-D-glycero-D-galacto-non-2-enonic acid'
ZGE 'SYSTEMATIC NAME' 'OpenEye OEToolkits' 2.0.7
;(2~{R},3~{R},4~{R})-3-acetamido-4-carbamimidamido-5-fluoranyl-2-[(1~{R},2~{R})-1,2,3-tris(oxidanyl)propyl]-3,4-dihydro-
2~{H}-pyran-6-carboxylic acid
;
#
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
ZGE 'CARBOHYDRATE ISOMER' D PDB ?
ZGE 'CARBOHYDRATE RING' dihydropyran PDB ?
ZGE 'CARBOHYDRATE PRIMARY CARBONYL GROUP' ketose PDB ?
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ZGE 'Create component' 2012-10-31 PDBJ
ZGE 'Initial release' 2013-05-01 RCSB
ZGE 'Other modification' 2020-04-12 RCSB
ZGE 'Other modification' 2020-07-03 RCSB
ZGE 'Modify name' 2020-07-17 RCSB
ZGE 'Modify synonyms' 2020-07-17 RCSB
ZGE 'Modify component atom id' 2020-07-17 RCSB
ZGE 'Modify PCM' 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id ZGE
_pdbx_chem_comp_pcm.modified_residue_id TYR
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category Carbohydrate
_pdbx_chem_comp_pcm.position 'Amino-acid side chain'
_pdbx_chem_comp_pcm.polypeptide_position 'Any position'
_pdbx_chem_comp_pcm.comp_id_linking_atom C2
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom OH
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
#
_pdbe_chem_comp_synonyms.comp_id ZGE
_pdbe_chem_comp_synonyms.name
;(2R,3R,4R)-3-acetamido-4-carbamimidamido-5-fluoranyl-2-[(1R,2R)-1,2,3-tris(oxidanyl)propyl]-3,4-dihydro-2H-pyran-6-carb
 oxylic acid
;
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
ZGE O10 O 7.479 4.965 1
ZGE C10 C 7.479 3.465 2
ZGE C11 C 6.180 2.715 3
ZGE N5 N 8.778 2.715 4
ZGE C5 C 8.778 1.215 5
ZGE C4 C 7.479 0.465 6
ZGE N4 N 6.180 1.215 7
ZGE C12 C 4.680 1.215 8
ZGE N7 N 3.930 -0.084 9
ZGE N6 N 3.930 2.514 10
ZGE C3 C 7.479 -1.035 11
ZGE F1 F 6.180 -1.785 12
ZGE C6 C 10.077 0.465 13
ZGE O6 O 10.077 -1.035 14
ZGE C2 C 8.778 -1.785 15
ZGE C1 C 8.778 -3.285 16
ZGE O1B O 10.077 -4.035 17
ZGE O1A O 7.479 -4.035 18
ZGE C7 C 11.376 1.215 19
ZGE O7 O 11.376 2.715 20
ZGE C8 C 12.675 0.465 21
ZGE O8 O 12.675 -1.035 22
ZGE C9 C 13.974 1.215 23
ZGE O9 O 15.273 0.465 24
ZGE H10 H 2.430 2.514 25
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
ZGE N6 C12 DOUBLE NONE 1
ZGE C11 C10 SINGLE NONE 2
ZGE C8 O8 SINGLE BEGINWEDGE 3
ZGE N5 C10 SINGLE NONE 4
ZGE C5 N5 SINGLE BEGINWEDGE 5
ZGE O9 C9 SINGLE NONE 6
ZGE C12 N7 SINGLE ENDUPRIGHT 7
ZGE C12 N4 SINGLE ENDDOWNRIGHT 8
ZGE C10 O10 DOUBLE NONE 9
ZGE C8 C9 SINGLE NONE 10
ZGE C8 C7 SINGLE NONE 11
ZGE C4 C5 SINGLE NONE 12
ZGE C4 N4 SINGLE BEGINDASH 13
ZGE C4 C3 SINGLE NONE 14
ZGE C6 C7 SINGLE NONE 15
ZGE C6 C5 SINGLE NONE 16
ZGE C6 O6 SINGLE BEGINDASH 17
ZGE C7 O7 SINGLE BEGINDASH 18
ZGE C3 F1 SINGLE NONE 19
ZGE C3 C2 DOUBLE NONE 20
ZGE O6 C2 SINGLE NONE 21
ZGE C2 C1 SINGLE NONE 22
ZGE C1 O1B SINGLE NONE 23
ZGE C1 O1A DOUBLE NONE 24
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
ZGE MurckoScaffold S1 scaffold C1=COCCC1 InChI=1S/C5H8O/c1-2-4-6-5-3-1/h2,4H,1,3,5H2 BUDQDWGNQVEFAC-UHFFFAOYSA-N
ZGE amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
ZGE C5 S1 1
ZGE C4 S1 1
ZGE C3 S1 1
ZGE C6 S1 1
ZGE O6 S1 1
ZGE C2 S1 1
ZGE N5 F1 1
ZGE C10 F1 1
ZGE O10 F1 1
ZGE C11 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id ZGE
_pdbe_chem_comp_rdkit_properties.exactmw 350.124
_pdbe_chem_comp_rdkit_properties.amw 350.303
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 11
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 9
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 10
_pdbe_chem_comp_rdkit_properties.NumHBD 8
_pdbe_chem_comp_rdkit_properties.NumHBA 8
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 24
_pdbe_chem_comp_rdkit_properties.NumAtoms 43
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 12
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.583
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 162.294
_pdbe_chem_comp_rdkit_properties.tpsa 198.220
_pdbe_chem_comp_rdkit_properties.CrippenClogP -3.279
_pdbe_chem_comp_rdkit_properties.CrippenMR 76.185
_pdbe_chem_comp_rdkit_properties.chi0v 11.025
_pdbe_chem_comp_rdkit_properties.chi1v 5.414
_pdbe_chem_comp_rdkit_properties.chi2v 2.166
_pdbe_chem_comp_rdkit_properties.chi3v 2.166
_pdbe_chem_comp_rdkit_properties.chi4v 1.356
_pdbe_chem_comp_rdkit_properties.chi0n 30.025
_pdbe_chem_comp_rdkit_properties.chi1n 14.283
_pdbe_chem_comp_rdkit_properties.chi2n 2.166
_pdbe_chem_comp_rdkit_properties.chi3n 2.166
_pdbe_chem_comp_rdkit_properties.chi4n 1.356
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.440
_pdbe_chem_comp_rdkit_properties.kappa1 5.540
_pdbe_chem_comp_rdkit_properties.kappa2 7.897
_pdbe_chem_comp_rdkit_properties.kappa3 4.305
_pdbe_chem_comp_rdkit_properties.Phi 1.823
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
ZGE UniChem ZINC ZINC000095920502
ZGE UniChem PubChem 71305033
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
ZGE O10 -1.074 3.369 0.570 ETKDGv3 1
ZGE C10 -1.648 2.654 1.435 ETKDGv3 2
ZGE C11 -2.416 3.305 2.538 ETKDGv3 3
ZGE N5 -1.556 1.223 1.379 ETKDGv3 4
ZGE C5 -0.735 0.506 0.394 ETKDGv3 5
ZGE C4 -1.567 -0.667 -0.186 ETKDGv3 6
ZGE N4 -1.049 -1.086 -1.495 ETKDGv3 7
ZGE C12 -1.248 -0.363 -2.726 ETKDGv3 8
ZGE N7 -0.649 -0.852 -3.926 ETKDGv3 9
ZGE N6 -1.954 0.725 -2.776 ETKDGv3 10
ZGE C3 -1.581 -1.840 0.755 ETKDGv3 11
ZGE F1 -2.714 -2.581 0.863 ETKDGv3 12
ZGE C6 0.602 0.041 1.072 ETKDGv3 13
ZGE O6 0.678 -1.380 1.239 ETKDGv3 14
ZGE C2 -0.448 -2.197 1.372 ETKDGv3 15
ZGE C1 -0.331 -3.433 2.168 ETKDGv3 16
ZGE O1B -1.411 -4.298 2.323 ETKDGv3 17
ZGE O1A 0.768 -3.711 2.718 ETKDGv3 18
ZGE C7 1.901 0.556 0.397 ETKDGv3 19
ZGE O7 1.986 1.957 0.503 ETKDGv3 20
ZGE C8 2.104 0.073 -1.070 ETKDGv3 21
ZGE O8 2.088 -1.330 -1.156 ETKDGv3 22
ZGE C9 3.396 0.627 -1.702 ETKDGv3 23
ZGE O9 4.533 0.196 -1.001 ETKDGv3 24
ZGE H1 -2.492 4.400 2.368 ETKDGv3 25
ZGE H2 -3.439 2.877 2.583 ETKDGv3 26
ZGE H3 -1.900 3.124 3.504 ETKDGv3 27
ZGE H4 -1.998 0.672 2.150 ETKDGv3 28
ZGE H5 -0.516 1.195 -0.445 ETKDGv3 29
ZGE H6 -2.626 -0.350 -0.311 ETKDGv3 30
ZGE H7 -0.500 -1.974 -1.553 ETKDGv3 31
ZGE H8 -0.779 -0.344 -4.830 ETKDGv3 32
ZGE H9 -0.066 -1.718 -3.915 ETKDGv3 33
ZGE H10 -2.423 1.156 -1.951 ETKDGv3 34
ZGE H11 0.621 0.465 2.101 ETKDGv3 35
ZGE H13 2.742 0.145 0.998 ETKDGv3 36
ZGE H14 1.401 2.356 -0.191 ETKDGv3 37
ZGE H15 1.268 0.455 -1.690 ETKDGv3 38
ZGE H16 2.815 -1.677 -0.575 ETKDGv3 39
ZGE H17 3.469 0.257 -2.747 ETKDGv3 40
ZGE H18 3.359 1.739 -1.756 ETKDGv3 41
ZGE H19 4.713 0.875 -0.299 ETKDGv3 42
ZGE HO1B -1.324 -5.146 2.871 ETKDGv3 43
#