data_WK3
#
_chem_comp.id WK3
_chem_comp.name N-benzyl-2-(2,6-dimethylanilino)-N,N-diethyl-2-oxoethan-1-aminium
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C21 H29 N2 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 1
_chem_comp.pdbx_initial_date 2022-09-16
_chem_comp.pdbx_modified_date 2023-04-07
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 325.468
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code WK3
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8EIZ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
WK3 C1 C1 C 0 1 N N N N N N 129.075 113.619 169.034 1.184 1.989 1.382 C1 WK3 1
WK3 C2 C2 C 0 1 N N N N N N 129.151 114.157 170.449 1.326 1.174 0.095 C2 WK3 2
WK3 C4 C3 C 0 1 N N N N N N 131.619 114.331 170.424 0.159 -0.601 1.209 C4 WK3 3
WK3 C5 C4 C 0 1 N N N N N N 131.766 112.960 171.067 -1.079 -0.268 0.417 C5 WK3 4
WK3 C7 C5 C 0 1 Y N N N N N 133.343 111.143 170.627 -3.443 -0.047 0.266 C7 WK3 5
WK3 C8 C6 C 0 1 Y N N N N N 134.593 111.628 171.026 -3.534 1.242 -0.244 C8 WK3 6
WK3 C9 C7 C 0 1 N N N N N N 134.842 113.100 171.220 -2.401 2.214 -0.041 C9 WK3 7
WK3 C10 C8 C 0 1 Y N N N N N 135.606 110.704 171.265 -4.663 1.631 -0.937 C10 WK3 8
WK3 C11 C9 C 0 1 Y N N N N N 135.379 109.346 171.141 -5.703 0.739 -1.123 C11 WK3 9
WK3 C12 C10 C 0 1 Y N N N N N 134.122 108.889 170.791 -5.616 -0.545 -0.616 C12 WK3 10
WK3 C13 C11 C 0 1 Y N N N N N 133.082 109.774 170.519 -4.489 -0.940 0.077 C13 WK3 11
WK3 C14 C12 C 0 1 N N N N N N 131.722 109.258 170.129 -4.395 -2.340 0.628 C14 WK3 12
WK3 C16 C13 C 0 1 N N N N N N 130.241 116.273 169.814 1.361 -1.044 -0.819 C16 WK3 13
WK3 C17 C14 C 0 1 N N N N N N 128.902 116.971 169.790 1.306 -2.535 -0.479 C17 WK3 14
WK3 C18 C15 C 0 1 N N N N N N 130.283 115.501 172.203 2.557 -0.561 1.204 C18 WK3 15
WK3 C19 C16 C 0 1 Y N N N N N 131.422 116.363 172.686 3.780 -0.209 0.396 C19 WK3 16
WK3 C20 C17 C 0 1 Y N N N N N 131.353 117.747 172.603 4.355 -1.153 -0.434 C20 WK3 17
WK3 C21 C18 C 0 1 Y N N N N N 132.416 118.533 173.014 5.477 -0.831 -1.174 C21 WK3 18
WK3 C22 C19 C 0 1 Y N N N N N 133.555 117.950 173.519 6.023 0.436 -1.085 C22 WK3 19
WK3 C23 C20 C 0 1 Y N N N N N 133.623 116.579 173.640 5.448 1.380 -0.255 C23 WK3 20
WK3 C24 C21 C 0 1 Y N N N N N 132.558 115.790 173.241 4.324 1.059 0.482 C24 WK3 21
WK3 N3 N1 N 1 1 N N N N N N 130.339 115.065 170.738 1.351 -0.258 0.422 N3 WK3 22
WK3 N6 N2 N 0 1 N N N N N N 132.339 112.070 170.231 -2.298 -0.446 0.964 N6 WK3 23
WK3 O15 O1 O 0 1 N N N N N N 131.432 112.705 172.220 -0.979 0.160 -0.714 O15 WK3 24
WK3 HC1A H1 H 0 0 N N N N N N 128.186 112.979 168.932 1.166 3.051 1.138 HC1A WK3 25
WK3 HC1C H2 H 0 0 N N N N N N 129.006 114.458 168.326 0.257 1.715 1.884 HC1C WK3 26
WK3 HC1B H3 H 0 0 N N N N N N 129.978 113.030 168.817 2.029 1.781 2.039 HC1B WK3 27
WK3 HC2A H4 H 0 0 N N N N N N 128.231 114.728 170.645 0.482 1.382 -0.562 HC2A WK3 28
WK3 HC2B H5 H 0 0 N N N N N N 129.204 113.300 171.136 2.254 1.447 -0.408 HC2B WK3 29
WK3 HC4B H6 H 0 0 N N N N N N 131.676 114.201 169.333 0.160 -0.031 2.138 HC4B WK3 30
WK3 HC4A H7 H 0 0 N N N N N N 132.459 114.955 170.763 0.168 -1.667 1.437 HC4A WK3 31
WK3 HC9A H8 H 0 0 N N N N N N 134.608 113.378 172.258 -1.775 2.234 -0.933 HC9A WK3 32
WK3 HC9C H9 H 0 0 N N N N N N 135.898 113.324 171.010 -2.805 3.210 0.140 HC9C WK3 33
WK3 HC9B H10 H 0 0 N N N N N N 134.202 113.674 170.533 -1.803 1.903 0.815 HC9B WK3 34
WK3 HC10 H11 H 0 0 N N N N N N 136.586 111.054 171.552 -4.734 2.632 -1.334 HC10 WK3 35
WK3 HC11 H12 H 0 0 N N N N N N 136.181 108.644 171.317 -6.586 1.045 -1.665 HC11 WK3 36
WK3 HC12 H13 H 0 0 N N N N N N 133.943 107.826 170.727 -6.430 -1.240 -0.763 HC12 WK3 37
WK3 H14B H14 H 0 0 N N N N N N 131.668 109.155 169.035 -4.879 -2.379 1.604 H14B WK3 38
WK3 H14A H15 H 0 0 N N N N N N 131.554 108.277 170.598 -4.891 -3.032 -0.051 H14A WK3 39
WK3 H14C H16 H 0 0 N N N N N N 130.951 109.964 170.469 -3.347 -2.620 0.731 H14C WK3 40
WK3 H16A H17 H 0 0 N N N N N N 130.465 115.935 168.791 2.274 -0.832 -1.376 H16A WK3 41
WK3 H16B H18 H 0 0 N N N N N N 130.998 117.005 170.133 0.495 -0.778 -1.425 H16B WK3 42
WK3 H17C H19 H 0 0 N N N N N N 128.944 117.822 169.095 0.394 -2.747 0.078 H17C WK3 43
WK3 H17B H20 H 0 0 N N N N N N 128.126 116.265 169.458 1.314 -3.118 -1.400 H17B WK3 44
WK3 H17A H21 H 0 0 N N N N N N 128.660 117.334 170.800 2.172 -2.801 0.127 H17A WK3 45
WK3 H18A H22 H 0 0 N N N N N N 129.350 116.065 172.350 2.575 -1.623 1.447 H18A WK3 46
WK3 H18B H23 H 0 0 N N N N N N 130.264 114.592 172.823 2.549 0.022 2.125 H18B WK3 47
WK3 HC20 H24 H 0 0 N N N N N N 130.461 118.215 172.214 3.928 -2.143 -0.504 HC20 WK3 48
WK3 HC21 H25 H 0 0 N N N N N N 132.351 119.608 172.938 5.927 -1.568 -1.823 HC21 WK3 49
WK3 HC22 H26 H 0 0 N N N N N N 134.392 118.564 173.819 6.900 0.688 -1.663 HC22 WK3 50
WK3 HC23 H27 H 0 0 N N N N N N 134.511 116.118 174.048 5.875 2.369 -0.185 HC23 WK3 51
WK3 HC24 H28 H 0 0 N N N N N N 132.611 114.718 173.363 3.872 1.798 1.127 HC24 WK3 52
WK3 HN6 H29 H 0 1 N N N N N N 132.041 112.061 169.277 -2.381 -0.850 1.842 HN6 WK3 53
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
WK3 C1 C2 SING N N 1
WK3 C17 C16 SING N N 2
WK3 C16 N3 SING N N 3
WK3 C14 C13 SING N N 4
WK3 N6 C7 SING N N 5
WK3 N6 C5 SING N N 6
WK3 C4 N3 SING N N 7
WK3 C4 C5 SING N N 8
WK3 C2 N3 SING N N 9
WK3 C13 C7 DOUB Y N 10
WK3 C13 C12 SING Y N 11
WK3 C7 C8 SING Y N 12
WK3 N3 C18 SING N N 13
WK3 C12 C11 DOUB Y N 14
WK3 C8 C9 SING N N 15
WK3 C8 C10 DOUB Y N 16
WK3 C5 O15 DOUB N N 17
WK3 C11 C10 SING Y N 18
WK3 C18 C19 SING N N 19
WK3 C20 C19 DOUB Y N 20
WK3 C20 C21 SING Y N 21
WK3 C19 C24 SING Y N 22
WK3 C21 C22 DOUB Y N 23
WK3 C24 C23 DOUB Y N 24
WK3 C22 C23 SING Y N 25
WK3 C1 HC1A SING N N 26
WK3 C1 HC1C SING N N 27
WK3 C1 HC1B SING N N 28
WK3 C2 HC2A SING N N 29
WK3 C2 HC2B SING N N 30
WK3 C4 HC4B SING N N 31
WK3 C4 HC4A SING N N 32
WK3 C9 HC9A SING N N 33
WK3 C9 HC9C SING N N 34
WK3 C9 HC9B SING N N 35
WK3 C10 HC10 SING N N 36
WK3 C11 HC11 SING N N 37
WK3 C12 HC12 SING N N 38
WK3 C14 H14B SING N N 39
WK3 C14 H14A SING N N 40
WK3 C14 H14C SING N N 41
WK3 C16 H16A SING N N 42
WK3 C16 H16B SING N N 43
WK3 C17 H17C SING N N 44
WK3 C17 H17B SING N N 45
WK3 C17 H17A SING N N 46
WK3 C18 H18A SING N N 47
WK3 C18 H18B SING N N 48
WK3 C20 HC20 SING N N 49
WK3 C21 HC21 SING N N 50
WK3 C22 HC22 SING N N 51
WK3 C23 HC23 SING N N 52
WK3 C24 HC24 SING N N 53
WK3 N6 HN6 SING N N 54
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
WK3 SMILES ACDLabs 12.01 O=C(Nc1c(C)cccc1C)C[N+](Cc1ccccc1)(CC)CC
WK3 InChI InChI 1.06 InChI=1S/C21H28N2O/c1-5-23(6-2,15-19-13-8-7-9-14-19)16-20(24)22-21-17(3)11-10-12-18(21)4/h7-14H,5-6,15-16H2,1-4H3/p+1
WK3 InChIKey InChI 1.06 ZFQMTVNLDNXRNQ-UHFFFAOYSA-O
WK3 SMILES_CANONICAL CACTVS 3.385 CC[N+](CC)(CC(=O)Nc1c(C)cccc1C)Cc2ccccc2
WK3 SMILES CACTVS 3.385 CC[N+](CC)(CC(=O)Nc1c(C)cccc1C)Cc2ccccc2
WK3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CC[N+](CC)(Cc1ccccc1)CC(=O)Nc2c(cccc2C)C
WK3 SMILES "OpenEye OEToolkits" 2.0.7 CC[N+](CC)(Cc1ccccc1)CC(=O)Nc2c(cccc2C)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
WK3 "SYSTEMATIC NAME" ACDLabs 12.01 N-benzyl-2-(2,6-dimethylanilino)-N,N-diethyl-2-oxoethan-1-aminium
WK3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[2-[(2,6-dimethylphenyl)amino]-2-oxidanylidene-ethyl]-diethyl-(phenylmethyl)azanium"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
WK3 'Create component' 2022-09-16 RCSB
WK3 'Initial release' 2023-04-12 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id WK3
_pdbe_chem_comp_drugbank_details.drugbank_id DB18588
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Denatonium
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number 47324-98-1
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
WK3 'Benzenemethanaminium, n-(2-((2,6-dimethylphenyl)amino)-2-oxoethyl)-n,n-diethyl' DrugBank ?
WK3 Benzyldiethyl((2,6-xylylcarbamoyl)methyl)ammonium DrugBank ?
WK3 Denatonium DrugBank ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
WK3 C1 C 10.446 -0.174 1
WK3 C2 C 8.946 -0.174 2
WK3 C4 C 6.897 0.375 3
WK3 C5 C 6.897 -1.125 4
WK3 C7 C 5.598 -3.375 5
WK3 C8 C 6.897 -4.125 6
WK3 C9 C 8.196 -3.375 7
WK3 C10 C 6.897 -5.625 8
WK3 C11 C 5.598 -6.375 9
WK3 C12 C 4.299 -5.625 10
WK3 C13 C 4.299 -4.125 11
WK3 C14 C 3.000 -3.375 12
WK3 C16 C 7.446 2.424 13
WK3 C17 C 5.946 2.424 14
WK3 C18 C 9.495 1.875 15
WK3 C19 C 9.495 3.375 16
WK3 C20 C 10.794 4.125 17
WK3 C21 C 10.794 5.625 18
WK3 C22 C 9.495 6.375 19
WK3 C23 C 8.196 5.625 20
WK3 C24 C 8.196 4.125 21
WK3 N3 N 8.196 1.125 22
WK3 N6 N 5.598 -1.875 23
WK3 O15 O 8.196 -1.875 24
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
WK3 C1 C2 SINGLE NONE 1
WK3 C17 C16 SINGLE NONE 2
WK3 C16 N3 SINGLE NONE 3
WK3 C14 C13 SINGLE NONE 4
WK3 N6 C7 SINGLE NONE 5
WK3 N6 C5 SINGLE NONE 6
WK3 C4 N3 SINGLE NONE 7
WK3 C4 C5 SINGLE NONE 8
WK3 C2 N3 SINGLE NONE 9
WK3 C13 C7 SINGLE NONE 10
WK3 C13 C12 DOUBLE NONE 11
WK3 C7 C8 DOUBLE NONE 12
WK3 N3 C18 SINGLE NONE 13
WK3 C12 C11 SINGLE NONE 14
WK3 C8 C9 SINGLE NONE 15
WK3 C8 C10 SINGLE NONE 16
WK3 C5 O15 DOUBLE NONE 17
WK3 C11 C10 DOUBLE NONE 18
WK3 C18 C19 SINGLE NONE 19
WK3 C20 C19 DOUBLE NONE 20
WK3 C20 C21 SINGLE NONE 21
WK3 C19 C24 SINGLE NONE 22
WK3 C21 C22 DOUBLE NONE 23
WK3 C24 C23 DOUBLE NONE 24
WK3 C22 C23 SINGLE NONE 25
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
WK3 MurckoScaffold S1 scaffold 'O=C(C[NH2+]Cc1ccccc1)Nc1ccccc1' InChI=1S/C15H16N2O/c18-15(17-14-9-5-2-6-10-14)12-16-11-13-7-3-1-4-8-13/h1-10,16H,11-12H2,(H,17,18)/p+1 QXTUGXAQOPADAU-UHFFFAOYSA-O
WK3 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
WK3 peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
WK3 phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
WK3 C4 S1 1
WK3 C5 S1 1
WK3 C7 S1 1
WK3 C8 S1 1
WK3 C10 S1 1
WK3 C11 S1 1
WK3 C12 S1 1
WK3 C13 S1 1
WK3 C18 S1 1
WK3 C19 S1 1
WK3 C20 S1 1
WK3 C21 S1 1
WK3 C22 S1 1
WK3 C23 S1 1
WK3 C24 S1 1
WK3 N3 S1 1
WK3 N6 S1 1
WK3 O15 S1 1
WK3 N6 F1 1
WK3 C5 F1 1
WK3 O15 F1 1
WK3 C4 F1 1
WK3 O15 F2 1
WK3 C5 F2 1
WK3 C4 F2 1
WK3 N3 F2 1
WK3 C7 F3 1
WK3 C13 F3 1
WK3 C12 F3 1
WK3 C11 F3 1
WK3 C10 F3 1
WK3 C8 F3 1
WK3 C19 F3 2
WK3 C20 F3 2
WK3 C21 F3 2
WK3 C22 F3 2
WK3 C23 F3 2
WK3 C24 F3 2
#
_pdbe_chem_comp_rdkit_properties.comp_id WK3
_pdbe_chem_comp_rdkit_properties.exactmw 325.227
_pdbe_chem_comp_rdkit_properties.amw 325.476
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 3
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 11
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 1
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 24
_pdbe_chem_comp_rdkit_properties.NumAtoms 53
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 3
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.381
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 186.256
_pdbe_chem_comp_rdkit_properties.tpsa 29.100
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.754
_pdbe_chem_comp_rdkit_properties.CrippenMR 99.279
_pdbe_chem_comp_rdkit_properties.chi0v 11.803
_pdbe_chem_comp_rdkit_properties.chi1v 6.046
_pdbe_chem_comp_rdkit_properties.chi2v 2.440
_pdbe_chem_comp_rdkit_properties.chi3v 2.440
_pdbe_chem_comp_rdkit_properties.chi4v 1.423
_pdbe_chem_comp_rdkit_properties.chi0n 40.803
_pdbe_chem_comp_rdkit_properties.chi1n 20.493
_pdbe_chem_comp_rdkit_properties.chi2n 2.440
_pdbe_chem_comp_rdkit_properties.chi3n 2.440
_pdbe_chem_comp_rdkit_properties.chi4n 1.423
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.130
_pdbe_chem_comp_rdkit_properties.kappa1 3.540
_pdbe_chem_comp_rdkit_properties.kappa2 8.112
_pdbe_chem_comp_rdkit_properties.kappa3 4.451
_pdbe_chem_comp_rdkit_properties.Phi 1.197
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
WK3 UniChem DrugBank DB18588
WK3 UniChem ChEBI 95255
WK3 UniChem fdasrs 4IK22DF4OU
WK3 UniChem LINCS LSM-6581
WK3 UniChem ClinicalTrials BITREX
WK3 UniChem ClinicalTrials DENATONIUM
WK3 UniChem ClinicalTrials 'DENATONIUM BENZOATE'
WK3 UniChem rxnorm DENATONIUM
WK3 UniChem rxnorm 'DENATONIUM BENZOATE'
WK3 UniChem 'Probes And Drugs' PD013263
WK3 UniChem 'EPA CompTox Dashboard' DTXSID9043770
WK3 UniChem ZINC ZINC000001601437
WK3 UniChem SureChEMBL SCHEMBL155674
WK3 UniChem PubChem 15488
WK3 UniChem Mcule MCULE-9057328681
WK3 UniChem NMRShiftDB 20208518
WK3 UniChem ACTor 47324-98-1
WK3 UniChem Nikkaji J81.984K
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
WK3 C1 2.126 -2.993 -1.619 ETKDGv3 1
WK3 C2 0.996 -1.971 -1.370 ETKDGv3 2
WK3 C4 0.408 0.380 -1.098 ETKDGv3 3
WK3 C5 -1.060 0.047 -0.928 ETKDGv3 4
WK3 C7 -3.177 0.250 0.404 ETKDGv3 5
WK3 C8 -4.098 0.933 -0.316 ETKDGv3 6
WK3 C9 -3.700 1.977 -1.324 ETKDGv3 7
WK3 C10 -5.538 0.629 -0.136 ETKDGv3 8
WK3 C11 -5.930 -0.288 0.754 ETKDGv3 9
WK3 C12 -4.932 -1.010 1.563 ETKDGv3 10
WK3 C13 -3.621 -0.755 1.413 ETKDGv3 11
WK3 C14 -2.604 -1.521 2.213 ETKDGv3 12
WK3 C16 1.211 -0.848 0.838 ETKDGv3 13
WK3 C17 2.041 -1.956 1.502 ETKDGv3 14
WK3 C18 2.756 -0.257 -1.028 ETKDGv3 15
WK3 C19 3.196 1.088 -0.468 ETKDGv3 16
WK3 C20 3.035 2.218 -1.185 ETKDGv3 17
WK3 C21 3.477 3.520 -0.643 ETKDGv3 18
WK3 C22 4.060 3.583 0.559 ETKDGv3 19
WK3 C23 4.271 2.349 1.341 ETKDGv3 20
WK3 C24 3.869 1.168 0.855 ETKDGv3 21
WK3 N3 1.364 -0.695 -0.650 ETKDGv3 22
WK3 N6 -1.775 0.500 0.231 ETKDGv3 23
WK3 O15 -1.658 -0.617 -1.818 ETKDGv3 24
WK3 HC1A 1.682 -3.936 -2.000 ETKDGv3 25
WK3 HC1C 2.702 -3.239 -0.710 ETKDGv3 26
WK3 HC1B 2.825 -2.623 -2.399 ETKDGv3 27
WK3 HC2A 0.173 -2.497 -0.833 ETKDGv3 28
WK3 HC2B 0.599 -1.745 -2.386 ETKDGv3 29
WK3 HC4B 0.574 0.623 -2.173 ETKDGv3 30
WK3 HC4A 0.586 1.326 -0.541 ETKDGv3 31
WK3 HC9A -2.870 2.605 -0.935 ETKDGv3 32
WK3 HC9C -4.553 2.651 -1.551 ETKDGv3 33
WK3 HC9B -3.380 1.486 -2.266 ETKDGv3 34
WK3 HC10 -6.282 1.150 -0.724 ETKDGv3 35
WK3 HC11 -6.983 -0.504 0.881 ETKDGv3 36
WK3 HC12 -5.277 -1.751 2.273 ETKDGv3 37
WK3 H14B -3.078 -2.125 3.016 ETKDGv3 38
WK3 H14A -1.892 -0.818 2.692 ETKDGv3 39
WK3 H14C -2.046 -2.205 1.540 ETKDGv3 40
WK3 H16A 0.158 -1.082 1.095 ETKDGv3 41
WK3 H16B 1.433 0.111 1.354 ETKDGv3 42
WK3 H17C 1.633 -2.955 1.248 ETKDGv3 43
WK3 H17B 3.116 -1.901 1.248 ETKDGv3 44
WK3 H17A 1.960 -1.849 2.605 ETKDGv3 45
WK3 H18A 3.515 -1.000 -0.712 ETKDGv3 46
WK3 H18B 2.846 -0.218 -2.138 ETKDGv3 47
WK3 HC20 2.575 2.191 -2.165 ETKDGv3 48
WK3 HC21 3.327 4.422 -1.222 ETKDGv3 49
WK3 HC22 4.385 4.535 0.957 ETKDGv3 50
WK3 HC23 4.759 2.402 2.306 ETKDGv3 51
WK3 HC24 4.045 0.272 1.434 ETKDGv3 52
WK3 HN6 -1.250 0.942 1.018 ETKDGv3 53
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