data_VVX
#
_chem_comp.id VVX
_chem_comp.name 6-(1H-Indol-4-yl)-4-(5-{[4-(1-methylethyl)-1-piperazinyl]methyl}-1,3-oxazol-2-yl)-1H-indazole
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C26 H28 N6 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2015-08-26
_chem_comp.pdbx_modified_date 2015-09-11
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 440.540
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code VVX
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5AE8
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VVX C2 C2 C 0 1 N N N N N N 0.543 -32.890 20.238 -7.913 -0.878 -2.238 C2 VVX 1
VVX C1 C1 C 0 1 N N N N N N 0.629 -34.206 21.003 -7.158 -1.849 -1.328 C1 VVX 2
VVX C C C 0 1 N N N N N N 2.059 -34.470 21.475 -6.176 -2.673 -2.163 C VVX 3
VVX N N N 0 1 N N N N N N -0.363 -34.283 22.098 -6.419 -1.091 -0.310 N VVX 4
VVX C25 C25 C 0 1 N N N N N N -1.764 -34.271 21.636 -5.777 -1.994 0.656 C25 VVX 5
VVX C24 C24 C 0 1 N N N N N N -2.708 -33.982 22.792 -5.086 -1.167 1.743 C24 VVX 6
VVX N1 N1 N 0 1 N N N N N N -2.567 -34.999 23.843 -4.097 -0.276 1.121 N1 VVX 7
VVX C4 C4 C 0 1 N N N N N N -1.181 -35.005 24.324 -4.739 0.627 0.156 C4 VVX 8
VVX C3 C3 C 0 1 N N N N N N -0.214 -35.279 23.180 -5.430 -0.200 -0.931 C3 VVX 9
VVX C5 C5 C 0 1 N N N N N N -3.498 -34.768 24.949 -3.358 0.482 2.140 C5 VVX 10
VVX C6 C6 C 0 1 Y N N N N N -4.876 -34.323 24.596 -2.198 1.194 1.493 C6 VVX 11
VVX O O O 0 1 Y N N N N N -5.185 -33.007 24.886 -0.951 0.708 1.333 O VVX 12
VVX C8 C8 C 0 1 Y N N N N N -6.485 -32.851 24.472 -0.221 1.652 0.713 C8 VVX 13
VVX N2 N2 N 0 1 Y N N N N N -6.994 -33.935 23.961 -0.988 2.694 0.492 N2 VVX 14
VVX C7 C7 C 0 1 Y N N N N N -5.978 -34.862 24.040 -2.216 2.431 0.962 C7 VVX 15
VVX C9 C9 C 0 1 Y N N N N N -7.136 -31.543 24.640 1.203 1.535 0.343 C9 VVX 16
VVX C15 C15 C 0 1 Y N N N N N -6.514 -30.455 25.295 1.859 2.605 -0.309 C15 VVX 17
VVX C14 C14 C 0 1 Y N N N N N -5.279 -30.193 25.933 1.438 3.884 -0.735 C14 VVX 18
VVX N4 N4 N 0 1 Y N N N N N -5.226 -28.956 26.388 2.447 4.491 -1.293 N4 VVX 19
VVX N3 N3 N 0 1 Y N N N N N -6.420 -28.382 26.059 3.572 3.659 -1.267 N3 VVX 20
VVX C13 C13 C 0 1 Y N N N N N -7.229 -29.245 25.401 3.217 2.483 -0.656 C13 VVX 21
VVX C12 C12 C 0 1 Y N N N N N -8.512 -29.094 24.886 3.906 1.313 -0.357 C12 VVX 22
VVX C11 C11 C 0 1 Y N N N N N -9.131 -30.166 24.238 3.255 0.265 0.284 C11 VVX 23
VVX C10 C10 C 0 1 Y N N N N N -8.433 -31.376 24.125 1.908 0.379 0.639 C10 VVX 24
VVX C16 C16 C 0 1 Y N N N N N -10.506 -30.020 23.680 3.997 -0.978 0.599 C16 VVX 25
VVX C23 C23 C 0 1 Y N N N N N -11.534 -29.310 24.325 4.753 -1.625 -0.396 C23 VVX 26
VVX C22 C22 C 0 1 Y N N N N N -11.599 -28.590 25.564 5.020 -1.352 -1.807 C22 VVX 27
VVX C21 C21 C 0 1 Y N N N N N -12.863 -28.107 25.665 5.825 -2.331 -2.251 C21 VVX 28
VVX N5 N5 N 0 1 Y N N N N N -13.600 -28.477 24.569 6.094 -3.208 -1.237 N5 VVX 29
VVX C20 C20 C 0 1 Y N N N N N -12.805 -29.217 23.730 5.452 -2.804 -0.087 C20 VVX 30
VVX C19 C19 C 0 1 Y N N N N N -13.079 -29.820 22.498 5.388 -3.321 1.204 C19 VVX 31
VVX C18 C18 C 0 1 Y N N N N N -12.054 -30.520 21.868 4.643 -2.680 2.171 C18 VVX 32
VVX C17 C17 C 0 1 Y N N N N N -10.788 -30.620 22.447 3.956 -1.513 1.880 C17 VVX 33
VVX H21C H21C H 0 0 N N N N N N -0.494 -32.723 19.910 -8.461 -1.441 -2.994 H21C VVX 34
VVX H22C H22C H 0 0 N N N N N N 0.858 -32.064 20.893 -8.613 -0.292 -1.643 H22C VVX 35
VVX H23C H23C H 0 0 N N N N N N 1.203 -32.933 19.359 -7.202 -0.211 -2.726 H23C VVX 36
VVX H1 H1 H 0 1 N N N N N N 0.383 -35.003 20.286 -7.869 -2.516 -0.840 H1 VVX 37
VVX HC1 HC1 H 0 1 N N N N N N 2.095 -35.423 22.023 -5.466 -2.006 -2.651 HC1 VVX 38
VVX HC2 HC2 H 0 1 N N N N N N 2.729 -34.523 20.604 -5.639 -3.365 -1.515 HC2 VVX 39
VVX HC3 HC3 H 0 1 N N N N N N 2.383 -33.654 22.138 -6.725 -3.235 -2.919 HC3 VVX 40
VVX H251 H251 H 0 0 N N N N N N -1.884 -33.493 20.868 -6.532 -2.635 1.112 H251 VVX 41
VVX H252 H252 H 0 0 N N N N N N -2.011 -35.253 21.205 -5.039 -2.610 0.143 H252 VVX 42
VVX H31C H31C H 0 0 N N N N N N -0.415 -36.281 22.774 -4.687 -0.795 -1.462 H31C VVX 43
VVX H32C H32C H 0 0 N N N N N N 0.816 -35.239 23.564 -5.931 0.467 -1.632 H32C VVX 44
VVX H241 H241 H 0 0 N N N N N N -2.472 -32.993 23.212 -5.829 -0.572 2.274 H241 VVX 45
VVX H242 H242 H 0 0 N N N N N N -3.744 -33.986 22.422 -4.585 -1.834 2.444 H242 VVX 46
VVX H41C H41C H 0 0 N N N N N N -0.948 -34.025 24.766 -5.478 1.243 0.669 H41C VVX 47
VVX H42C H42C H 0 0 N N N N N N -1.068 -35.788 25.088 -3.985 1.268 -0.300 H42C VVX 48
VVX H51C H51C H 0 0 N N N N N N -3.588 -35.711 25.509 -4.022 1.214 2.601 H51C VVX 49
VVX H52C H52C H 0 0 N N N N N N -3.057 -33.997 25.598 -2.985 -0.202 2.902 H52C VVX 50
VVX H7 H7 H 0 1 N N N N N N -6.055 -35.885 23.701 -3.068 3.093 0.923 H7 VVX 51
VVX H10 H10 H 0 1 N N N N N N -8.908 -32.208 23.626 1.413 -0.440 1.141 H10 VVX 52
VVX H14 H14 H 0 1 N N N N N N -4.481 -30.914 26.035 0.445 4.292 -0.618 H14 VVX 53
VVX H3 H3 H 0 1 N N N N N N -6.667 -27.438 26.278 4.450 3.876 -1.619 H3 VVX 54
VVX H12 H12 H 0 1 N N N N N N -9.028 -28.151 24.987 4.948 1.218 -0.623 H12 VVX 55
VVX H17 H17 H 0 1 N N N N N N -10.012 -31.170 21.935 3.382 -1.021 2.651 H17 VVX 56
VVX H22 H22 H 0 1 N N N N N N -10.799 -28.458 26.277 4.641 -0.520 -2.384 H22 VVX 57
VVX H21 H21 H 0 1 N N N N N N -13.235 -27.517 26.489 6.204 -2.414 -3.259 H21 VVX 58
VVX H5 H5 H 0 1 N N N N N N -14.559 -28.246 24.408 6.653 -3.997 -1.315 H5 VVX 59
VVX H19 H19 H 0 1 N N N N N N -14.058 -29.745 22.048 5.923 -4.227 1.448 H19 VVX 60
VVX H18 H18 H 0 1 N N N N N N -12.241 -30.993 20.916 4.600 -3.090 3.169 H18 VVX 61
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VVX C2 C1 SING N N 1
VVX C1 C SING N N 2
VVX C1 N SING N N 3
VVX N C25 SING N N 4
VVX N C3 SING N N 5
VVX C25 C24 SING N N 6
VVX C24 N1 SING N N 7
VVX N1 C4 SING N N 8
VVX N1 C5 SING N N 9
VVX C4 C3 SING N N 10
VVX C5 C6 SING N N 11
VVX C6 O SING Y N 12
VVX C6 C7 DOUB Y N 13
VVX O C8 SING Y N 14
VVX C8 N2 DOUB Y N 15
VVX C8 C9 SING N N 16
VVX N2 C7 SING Y N 17
VVX C9 C15 SING Y N 18
VVX C9 C10 DOUB Y N 19
VVX C15 C14 SING Y N 20
VVX C15 C13 DOUB Y N 21
VVX C14 N4 DOUB Y N 22
VVX N4 N3 SING Y N 23
VVX N3 C13 SING Y N 24
VVX C13 C12 SING Y N 25
VVX C12 C11 DOUB Y N 26
VVX C11 C10 SING Y N 27
VVX C11 C16 SING N N 28
VVX C16 C23 SING Y N 29
VVX C16 C17 DOUB Y N 30
VVX C23 C22 SING Y N 31
VVX C23 C20 DOUB Y N 32
VVX C22 C21 DOUB Y N 33
VVX C21 N5 SING Y N 34
VVX N5 C20 SING Y N 35
VVX C20 C19 SING Y N 36
VVX C19 C18 DOUB Y N 37
VVX C18 C17 SING Y N 38
VVX C2 H21C SING N N 39
VVX C2 H22C SING N N 40
VVX C2 H23C SING N N 41
VVX C1 H1 SING N N 42
VVX C HC1 SING N N 43
VVX C HC2 SING N N 44
VVX C HC3 SING N N 45
VVX C25 H251 SING N N 46
VVX C25 H252 SING N N 47
VVX C3 H31C SING N N 48
VVX C3 H32C SING N N 49
VVX C24 H241 SING N N 50
VVX C24 H242 SING N N 51
VVX C4 H41C SING N N 52
VVX C4 H42C SING N N 53
VVX C5 H51C SING N N 54
VVX C5 H52C SING N N 55
VVX C7 H7 SING N N 56
VVX C10 H10 SING N N 57
VVX C14 H14 SING N N 58
VVX N3 H3 SING N N 59
VVX C12 H12 SING N N 60
VVX C17 H17 SING N N 61
VVX C22 H22 SING N N 62
VVX C21 H21 SING N N 63
VVX N5 H5 SING N N 64
VVX C19 H19 SING N N 65
VVX C18 H18 SING N N 66
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VVX InChI InChI 1.03 InChI=1S/C26H28N6O/c1-17(2)32-10-8-31(9-11-32)16-19-14-28-26(33-19)22-12-18(13-25-23(22)15-29-30-25)20-4-3-5-24-21(20)6-7-27-24/h3-7,12-15,17,27H,8-11,16H2,1-2H3,(H,29,30)
VVX InChIKey InChI 1.03 MCIDWGZGWVSZMK-UHFFFAOYSA-N
VVX SMILES_CANONICAL CACTVS 3.385 CC(C)N1CCN(CC1)Cc2oc(nc2)c3cc(cc4[nH]ncc34)c5cccc6[nH]ccc56
VVX SMILES CACTVS 3.385 CC(C)N1CCN(CC1)Cc2oc(nc2)c3cc(cc4[nH]ncc34)c5cccc6[nH]ccc56
VVX SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 CC(C)N1CCN(CC1)Cc2cnc(o2)c3cc(cc4c3cn[nH]4)c5cccc6c5cc[nH]6
VVX SMILES "OpenEye OEToolkits" 1.7.6 CC(C)N1CCN(CC1)Cc2cnc(o2)c3cc(cc4c3cn[nH]4)c5cccc6c5cc[nH]6
#
_pdbx_chem_comp_identifier.comp_id VVX
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 1.7.6
_pdbx_chem_comp_identifier.identifier
2-[6-(1H-indol-4-yl)-1H-indazol-4-yl]-5-[(4-propan-2-ylpiperazin-1-yl)methyl]-1,3-oxazole
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VVX 'Create component' 2015-08-26 EBI
VVX 'Initial release' 2015-09-16 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id VVX
_pdbe_chem_comp_drugbank_details.drugbank_id DB16253
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Nemiralisib
_pdbe_chem_comp_drugbank_details.description
'Nemiralisib is under investigation in clinical trial NCT03345407 (Dose Finding Study of Nemiralisib (GSK2269557) in Subjects With an Acute Moderate or Severe Exacerbation of Chronic Obstructive Pulmonary Disease (COPD)).'
_pdbe_chem_comp_drugbank_details.cas_number 1254036-71-9
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_synonyms.comp_id VVX
_pdbe_chem_comp_synonyms.name Nemiralisib
_pdbe_chem_comp_synonyms.provenance DrugBank
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
VVX C2 C 8.123 9.558 1
VVX C1 C 9.005 8.345 2
VVX C C 10.497 8.502 3
VVX N N 8.395 6.974 4
VVX C25 C 6.903 6.818 5
VVX C24 C 6.293 5.447 6
VVX N1 N 7.175 4.234 7
VVX C4 C 8.666 4.391 8
VVX C3 C 9.277 5.761 9
VVX C5 C 6.564 2.864 10
VVX C6 C 7.446 1.650 11
VVX O O 6.983 0.223 12
VVX C8 C 8.196 -0.658 13
VVX N2 N 9.410 0.223 14
VVX C7 C 8.946 1.650 15
VVX C9 C 8.196 -2.158 16
VVX C15 C 9.495 -2.908 17
VVX C14 C 10.915 -2.451 18
VVX N4 N 11.790 -3.658 19
VVX N3 N 10.915 -4.865 20
VVX C13 C 9.495 -4.408 21
VVX C12 C 8.196 -5.158 22
VVX C11 C 6.897 -4.408 23
VVX C10 C 6.897 -2.908 24
VVX C16 C 5.598 -5.158 25
VVX C23 C 5.598 -6.658 26
VVX C22 C 6.704 -7.659 27
VVX C21 C 6.096 -9.021 28
VVX N5 N 4.613 -8.866 29
VVX C20 C 4.299 -7.408 30
VVX C19 C 3.000 -6.658 31
VVX C18 C 3.000 -5.158 32
VVX C17 C 4.299 -4.408 33
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
VVX C2 C1 SINGLE NONE 1
VVX C1 C SINGLE NONE 2
VVX C1 N SINGLE NONE 3
VVX N C25 SINGLE NONE 4
VVX N C3 SINGLE NONE 5
VVX C25 C24 SINGLE NONE 6
VVX C24 N1 SINGLE NONE 7
VVX N1 C4 SINGLE NONE 8
VVX N1 C5 SINGLE NONE 9
VVX C4 C3 SINGLE NONE 10
VVX C5 C6 SINGLE NONE 11
VVX C6 O SINGLE NONE 12
VVX C6 C7 DOUBLE NONE 13
VVX O C8 SINGLE NONE 14
VVX C8 N2 DOUBLE NONE 15
VVX C8 C9 SINGLE NONE 16
VVX N2 C7 SINGLE NONE 17
VVX C9 C15 DOUBLE NONE 18
VVX C9 C10 SINGLE NONE 19
VVX C15 C14 SINGLE NONE 20
VVX C15 C13 SINGLE NONE 21
VVX C14 N4 DOUBLE NONE 22
VVX N4 N3 SINGLE NONE 23
VVX N3 C13 SINGLE NONE 24
VVX C13 C12 DOUBLE NONE 25
VVX C12 C11 SINGLE NONE 26
VVX C11 C10 DOUBLE NONE 27
VVX C11 C16 SINGLE NONE 28
VVX C16 C23 DOUBLE NONE 29
VVX C16 C17 SINGLE NONE 30
VVX C23 C22 SINGLE NONE 31
VVX C23 C20 SINGLE NONE 32
VVX C22 C21 DOUBLE NONE 33
VVX C21 N5 SINGLE NONE 34
VVX N5 C20 SINGLE NONE 35
VVX C20 C19 DOUBLE NONE 36
VVX C19 C18 SINGLE NONE 37
VVX C18 C17 DOUBLE NONE 38
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
VVX MurckoScaffold S1 scaffold 'c1cc(-c2cc(-c3ncc(CN4CCNCC4)o3)c3cn[nH]c3c2)c2cc[nH]c2c1' InChI=1S/C23H22N6O/c1-2-17(18-4-5-25-21(18)3-1)15-10-19(20-13-27-28-22(20)11-15)23-26-12-16(30-23)14-29-8-6-24-7-9-29/h1-5,10-13,24-25H,6-9,14H2,(H,27,28) QGFMDPOUJANKPQ-UHFFFAOYSA-N
VVX indole F1 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
VVX oxazole F2 fragment c1cocn1 InChI=1S/C3H3NO/c1-2-5-3-4-1/h1-3H ZCQWOFVYLHDMMC-UHFFFAOYSA-N
VVX phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
VVX piperazine F4 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
VVX pyrazole F5 fragment 'c1cn[nH]c1' InChI=1S/C3H4N2/c1-2-4-5-3-1/h1-3H,(H,4,5) WTKZEGDFNFYCGP-UHFFFAOYSA-N
VVX pyrrole F6 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
VVX N S1 1
VVX C25 S1 1
VVX C24 S1 1
VVX N1 S1 1
VVX C4 S1 1
VVX C3 S1 1
VVX C5 S1 1
VVX C6 S1 1
VVX O S1 1
VVX C8 S1 1
VVX N2 S1 1
VVX C7 S1 1
VVX C9 S1 1
VVX C15 S1 1
VVX C14 S1 1
VVX N4 S1 1
VVX N3 S1 1
VVX C13 S1 1
VVX C12 S1 1
VVX C11 S1 1
VVX C10 S1 1
VVX C16 S1 1
VVX C23 S1 1
VVX C22 S1 1
VVX C21 S1 1
VVX N5 S1 1
VVX C20 S1 1
VVX C19 S1 1
VVX C18 S1 1
VVX C17 S1 1
VVX C20 F1 1
VVX C23 F1 1
VVX C22 F1 1
VVX C21 F1 1
VVX N5 F1 1
VVX C16 F1 1
VVX C17 F1 1
VVX C18 F1 1
VVX C19 F1 1
VVX C6 F2 1
VVX C7 F2 1
VVX N2 F2 1
VVX C8 F2 1
VVX O F2 1
VVX C9 F3 1
VVX C15 F3 1
VVX C13 F3 1
VVX C12 F3 1
VVX C11 F3 1
VVX C10 F3 1
VVX C16 F3 2
VVX C23 F3 2
VVX C20 F3 2
VVX C19 F3 2
VVX C18 F3 2
VVX C17 F3 2
VVX N F4 1
VVX C25 F4 1
VVX C24 F4 1
VVX N1 F4 1
VVX C4 F4 1
VVX C3 F4 1
VVX C14 F5 1
VVX C15 F5 1
VVX C13 F5 1
VVX N3 F5 1
VVX N4 F5 1
VVX C21 F6 1
VVX C22 F6 1
VVX C23 F6 1
VVX C20 F6 1
VVX N5 F6 1
#
_pdbe_chem_comp_rdkit_properties.comp_id VVX
_pdbe_chem_comp_rdkit_properties.exactmw 440.232
_pdbe_chem_comp_rdkit_properties.amw 440.551
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 33
_pdbe_chem_comp_rdkit_properties.NumAtoms 61
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.308
_pdbe_chem_comp_rdkit_properties.NumRings 6
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 5
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 231.418
_pdbe_chem_comp_rdkit_properties.tpsa 76.980
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.221
_pdbe_chem_comp_rdkit_properties.CrippenMR 123.547
_pdbe_chem_comp_rdkit_properties.chi0v 16.092
_pdbe_chem_comp_rdkit_properties.chi1v 9.042
_pdbe_chem_comp_rdkit_properties.chi2v 4.402
_pdbe_chem_comp_rdkit_properties.chi3v 4.402
_pdbe_chem_comp_rdkit_properties.chi4v 2.965
_pdbe_chem_comp_rdkit_properties.chi0n 44.092
_pdbe_chem_comp_rdkit_properties.chi1n 22.936
_pdbe_chem_comp_rdkit_properties.chi2n 4.402
_pdbe_chem_comp_rdkit_properties.chi3n 4.402
_pdbe_chem_comp_rdkit_properties.chi4n 2.965
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.420
_pdbe_chem_comp_rdkit_properties.kappa1 6.170
_pdbe_chem_comp_rdkit_properties.kappa2 8.171
_pdbe_chem_comp_rdkit_properties.kappa3 3.730
_pdbe_chem_comp_rdkit_properties.Phi 1.528
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
VVX UniChem DrugBank DB16253
VVX UniChem 'Guide to Pharmacology' 9425
VVX UniChem fdasrs OEP8JJ3OZR
VVX UniChem HMDB HMDB0255509
VVX UniChem ChemicalBook CB63106826
VVX UniChem ClinicalTrials GSK-2269557H
VVX UniChem ClinicalTrials GSK2269557H
VVX UniChem ClinicalTrials NEMIRALISIB
VVX UniChem MedChemExpress HY-19535A
VVX UniChem 'Probes And Drugs' PD053924
VVX UniChem BindingDb 50004529
VVX UniChem ZINC ZINC000095564436
VVX UniChem SureChEMBL SCHEMBL109919
VVX UniChem 'PubChem TPHARMA' 103056591
VVX UniChem PubChem 49784002
VVX UniChem Nikkaji J3.464.371G
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
VVX C2 -7.071 -0.813 -2.305 ETKDGv3 1
VVX C1 -6.809 0.366 -1.362 ETKDGv3 2
VVX C -6.430 1.629 -2.160 ETKDGv3 3
VVX N -5.818 -0.015 -0.320 ETKDGv3 4
VVX C25 -5.946 0.803 0.902 ETKDGv3 5
VVX C24 -5.036 0.243 2.001 ETKDGv3 6
VVX N1 -3.634 0.217 1.541 ETKDGv3 7
VVX C4 -3.519 -0.606 0.318 ETKDGv3 8
VVX C3 -4.414 -0.034 -0.783 ETKDGv3 9
VVX C5 -2.760 -0.306 2.611 ETKDGv3 10
VVX C6 -1.327 0.019 2.323 ETKDGv3 11
VVX O -0.392 -0.885 1.854 ETKDGv3 12
VVX C8 0.769 -0.136 1.701 ETKDGv3 13
VVX N2 0.609 1.107 2.031 ETKDGv3 14
VVX C7 -0.755 1.205 2.432 ETKDGv3 15
VVX C9 2.053 -0.681 1.215 ETKDGv3 16
VVX C15 2.205 -1.964 0.849 ETKDGv3 17
VVX C14 1.314 -3.128 0.805 ETKDGv3 18
VVX N4 1.957 -4.177 0.379 ETKDGv3 19
VVX N3 3.296 -3.856 0.100 ETKDGv3 20
VVX C13 3.460 -2.482 0.386 ETKDGv3 21
VVX C12 4.557 -1.735 0.281 ETKDGv3 22
VVX C11 4.448 -0.294 0.658 ETKDGv3 23
VVX C10 3.263 0.195 1.109 ETKDGv3 24
VVX C16 5.634 0.587 0.571 ETKDGv3 25
VVX C23 6.426 0.625 -0.513 ETKDGv3 26
VVX C22 6.350 -0.035 -1.817 ETKDGv3 27
VVX C21 7.373 0.407 -2.558 ETKDGv3 28
VVX N5 8.186 1.359 -1.863 ETKDGv3 29
VVX C20 7.575 1.492 -0.592 ETKDGv3 30
VVX C19 7.922 2.309 0.402 ETKDGv3 31
VVX C18 7.081 2.297 1.626 ETKDGv3 32
VVX C17 6.001 1.489 1.707 ETKDGv3 33
VVX H21C -7.305 -1.725 -1.716 ETKDGv3 34
VVX H22C -7.939 -0.590 -2.961 ETKDGv3 35
VVX H23C -6.192 -1.019 -2.951 ETKDGv3 36
VVX H1 -7.787 0.576 -0.871 ETKDGv3 37
VVX HC1 -6.208 2.475 -1.478 ETKDGv3 38
VVX HC2 -7.280 1.930 -2.808 ETKDGv3 39
VVX HC3 -5.552 1.444 -2.814 ETKDGv3 40
VVX H251 -5.672 1.862 0.703 ETKDGv3 41
VVX H252 -6.993 0.774 1.276 ETKDGv3 42
VVX H31C -4.309 -0.674 -1.683 ETKDGv3 43
VVX H32C -4.060 0.992 -1.030 ETKDGv3 44
VVX H241 -5.379 -0.780 2.282 ETKDGv3 45
VVX H242 -5.131 0.901 2.893 ETKDGv3 46
VVX H41C -2.471 -0.597 -0.052 ETKDGv3 47
VVX H42C -3.810 -1.663 0.520 ETKDGv3 48
VVX H51C -2.879 -1.407 2.725 ETKDGv3 49
VVX H52C -3.018 0.159 3.589 ETKDGv3 50
VVX H7 -1.237 2.116 2.761 ETKDGv3 51
VVX H10 3.182 1.240 1.384 ETKDGv3 52
VVX H14 0.269 -3.155 1.077 ETKDGv3 53
VVX H3 4.015 -4.525 -0.253 ETKDGv3 54
VVX H12 5.491 -2.168 -0.050 ETKDGv3 55
VVX H17 5.404 1.491 2.611 ETKDGv3 56
VVX H22 5.598 -0.736 -2.151 ETKDGv3 57
VVX H21 7.560 0.096 -3.577 ETKDGv3 58
VVX H5 9.018 1.872 -2.229 ETKDGv3 59
VVX H19 8.779 2.965 0.316 ETKDGv3 60
VVX H18 7.337 2.943 2.456 ETKDGv3 61
#