data_VQD
#
_chem_comp.id VQD
_chem_comp.name
(3R)-3-{4-[(3R)-4-(3,4-difluorobenzene-1-carbonyl)morpholin-3-yl]-1H-1,2,3-triazol-1-yl}-N-hydroxy-4-(naphthalen-2-yl)butanamide
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C27 H25 F2 N5 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-09-08
_chem_comp.pdbx_modified_date 2021-09-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 521.515
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code VQD
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7K1D
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VQD C10 C1 C 0 1 Y N N N N N -80.053 -73.483 9.448 -4.087 3.416 0.107 C10 VQD 1
VQD C11 C2 C 0 1 Y N N N N N -78.813 -73.544 8.826 -4.699 4.451 -0.531 C11 VQD 2
VQD C12 C3 C 0 1 Y N N N N N -77.642 -73.712 9.576 -5.693 4.221 -1.481 C12 VQD 3
VQD C13 C4 C 0 1 Y N N N N N -77.707 -73.813 10.960 -6.081 2.956 -1.797 C13 VQD 4
VQD C14 C5 C 0 1 Y N N N N N -78.979 -73.754 11.606 -5.471 1.862 -1.159 C14 VQD 5
VQD C15 C6 C 0 1 Y N N N N N -79.049 -73.856 13.026 -5.845 0.541 -1.459 C15 VQD 6
VQD C16 C7 C 0 1 Y N N N N N -80.287 -73.793 13.649 -5.234 -0.494 -0.821 C16 VQD 7
VQD C18 C8 C 0 1 Y N N N N N -83.951 -71.034 12.454 -0.468 -0.531 1.185 C18 VQD 8
VQD C19 C9 C 0 1 Y N N N N N -83.613 -69.839 11.722 0.239 0.580 0.871 C19 VQD 9
VQD C20 C10 C 0 1 N N R N N N -84.367 -69.190 10.542 1.334 1.214 1.690 C20 VQD 10
VQD C21 C11 C 0 1 N N N N N N -85.869 -69.299 10.627 1.087 2.723 1.801 C21 VQD 11
VQD C03 C12 C 0 1 N N N N N N -83.621 -72.490 16.804 -2.654 -4.243 0.444 C03 VQD 12
VQD C04 C13 C 0 1 N N N N N N -84.052 -72.223 15.357 -1.716 -3.088 0.677 C04 VQD 13
VQD C05 C14 C 0 1 N N R N N N -82.895 -72.230 14.365 -2.308 -1.817 0.063 C05 VQD 14
VQD C06 C15 C 0 1 N N N N N N -82.801 -73.561 13.624 -3.585 -1.435 0.815 C06 VQD 15
VQD C07 C16 C 0 1 Y N N N N N -81.459 -73.633 12.902 -4.240 -0.264 0.128 C07 VQD 16
VQD C08 C17 C 0 1 Y N N N N N -81.402 -73.522 11.521 -3.852 1.002 0.445 C08 VQD 17
VQD C09 C18 C 0 1 Y N N N N N -80.128 -73.592 10.872 -4.460 2.095 -0.194 C09 VQD 18
VQD C23 C19 C 0 1 N N N N N N -85.753 -70.845 8.766 3.433 3.214 1.672 C23 VQD 19
VQD C24 C20 C 0 1 N N N N N N -84.229 -70.814 8.811 3.800 1.730 1.554 C24 VQD 20
VQD C26 C21 C 0 1 N N N N N N -83.056 -68.571 8.528 2.748 0.169 -0.022 C26 VQD 21
VQD C27 C22 C 0 1 Y N N N N N -82.520 -68.934 7.142 4.081 -0.125 -0.587 C27 VQD 22
VQD C28 C23 C 0 1 Y N N N N N -82.867 -68.098 6.104 4.202 -0.544 -1.914 C28 VQD 23
VQD C29 C24 C 0 1 Y N N N N N -82.420 -68.367 4.832 5.448 -0.818 -2.437 C29 VQD 24
VQD C30 C25 C 0 1 Y N N N N N -81.619 -69.476 4.617 6.580 -0.679 -1.650 C30 VQD 25
VQD C32 C26 C 0 1 Y N N N N N -81.262 -70.325 5.663 6.466 -0.263 -0.330 C32 VQD 26
VQD C34 C27 C 0 1 Y N N N N N -81.717 -70.052 6.941 5.224 0.020 0.202 C34 VQD 27
VQD F31 F1 F 0 1 N N N N N N -81.199 -69.700 3.340 7.798 -0.949 -2.169 F31 VQD 28
VQD F33 F2 F 0 1 N N N N N N -80.484 -71.426 5.448 7.573 -0.129 0.433 F33 VQD 29
VQD N02 N1 N 0 1 N N N N N N -84.048 -73.728 17.468 -2.399 -5.443 1.003 N02 VQD 30
VQD N17 N2 N 0 1 Y N N N N N -83.000 -71.163 13.384 -1.336 -0.726 0.166 N17 VQD 31
VQD N25 N3 N 0 1 N N N N N N -83.850 -69.517 9.259 2.632 1.003 1.030 N25 VQD 32
VQD N36 N4 N 0 1 Y N N N N N -82.497 -69.371 12.271 -0.225 1.004 -0.310 N36 VQD 33
VQD N37 N5 N 0 1 Y N N N N N -82.141 -70.175 13.250 -1.160 0.211 -0.699 N37 VQD 34
VQD O01 O1 O 0 1 N N N N N N -83.732 -74.101 18.795 -3.281 -6.528 0.783 O01 VQD 35
VQD O22 O2 O 0 1 N N N N N N -86.343 -70.483 10.013 2.220 3.341 2.417 O22 VQD 36
VQD O35 O3 O 0 1 N N N N N N -82.843 -67.515 9.020 1.756 -0.341 -0.506 O35 VQD 37
VQD O38 O4 O 0 1 N N N N N N -82.958 -71.682 17.361 -3.640 -4.094 -0.248 O38 VQD 38
VQD H1 H1 H 0 1 N N N N N N -80.951 -73.355 8.863 -3.315 3.610 0.837 H1 VQD 39
VQD H2 H2 H 0 1 N N N N N N -78.751 -73.461 7.751 -4.411 5.465 -0.298 H2 VQD 40
VQD H3 H3 H 0 1 N N N N N N -76.686 -73.763 9.077 -6.164 5.060 -1.972 H3 VQD 41
VQD H4 H4 H 0 1 N N N N N N -76.805 -73.935 11.541 -6.853 2.793 -2.535 H4 VQD 42
VQD H5 H5 H 0 1 N N N N N N -78.149 -73.981 13.610 -6.615 0.348 -2.193 H5 VQD 43
VQD H6 H6 H 0 1 N N N N N N -80.347 -73.868 14.725 -5.523 -1.508 -1.054 H6 VQD 44
VQD H7 H7 H 0 1 N N N N N N -84.795 -71.687 12.286 -0.358 -1.141 2.070 H7 VQD 45
VQD H8 H8 H 0 1 N N N N N N -84.169 -68.115 10.663 1.351 0.770 2.686 H8 VQD 46
VQD H9 H9 H 0 1 N N N N N N -86.319 -68.431 10.122 0.940 3.142 0.806 H9 VQD 47
VQD H10 H10 H 0 1 N N N N N N -86.167 -69.303 11.686 0.199 2.903 2.408 H10 VQD 48
VQD H11 H11 H 0 1 N N N N N N -84.540 -71.238 15.315 -1.577 -2.943 1.749 H11 VQD 49
VQD H12 H12 H 0 1 N N N N N N -84.770 -73.001 15.059 -0.753 -3.301 0.212 H12 VQD 50
VQD H13 H13 H 0 1 N N N N N N -81.963 -72.096 14.934 -2.544 -1.997 -0.986 H13 VQD 51
VQD H14 H14 H 0 1 N N N N N N -83.618 -73.634 12.892 -4.270 -2.283 0.821 H14 VQD 52
VQD H15 H15 H 0 1 N N N N N N -82.878 -74.390 14.343 -3.335 -1.162 1.840 H15 VQD 53
VQD H16 H16 H 0 1 N N N N N N -82.305 -73.385 10.944 -3.080 1.164 1.183 H16 VQD 54
VQD H17 H17 H 0 1 N N N N N N -86.098 -70.140 7.995 4.233 3.747 2.185 H17 VQD 55
VQD H18 H18 H 0 1 N N N N N N -86.078 -71.863 8.504 3.294 3.635 0.676 H18 VQD 56
VQD H19 H19 H 0 1 N N N N N N -83.856 -71.578 9.509 4.641 1.613 0.871 H19 VQD 57
VQD H20 H20 H 0 1 N N N N N N -83.818 -71.002 7.808 4.066 1.338 2.535 H20 VQD 58
VQD H21 H21 H 0 1 N N N N N N -83.488 -67.234 6.289 3.321 -0.653 -2.529 H21 VQD 59
VQD H22 H22 H 0 1 N N N N N N -82.690 -67.721 4.010 5.541 -1.142 -3.463 H22 VQD 60
VQD H23 H23 H 0 1 N N N N N N -81.453 -70.695 7.767 5.136 0.343 1.228 H23 VQD 61
VQD H24 H24 H 0 1 N N N N N N -84.610 -74.362 16.936 -1.611 -5.562 1.556 H24 VQD 62
VQD H25 H25 H 0 1 N N N N N N -83.200 -73.424 19.196 -3.015 -7.347 1.225 H25 VQD 63
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VQD F31 C30 SING N N 1
VQD C30 C29 DOUB Y N 2
VQD C30 C32 SING Y N 3
VQD C29 C28 SING Y N 4
VQD F33 C32 SING N N 5
VQD C32 C34 DOUB Y N 6
VQD C28 C27 DOUB Y N 7
VQD C34 C27 SING Y N 8
VQD C27 C26 SING N N 9
VQD C26 O35 DOUB N N 10
VQD C26 N25 SING N N 11
VQD C23 C24 SING N N 12
VQD C23 O22 SING N N 13
VQD C24 N25 SING N N 14
VQD C11 C10 DOUB Y N 15
VQD C11 C12 SING Y N 16
VQD N25 C20 SING N N 17
VQD C10 C09 SING Y N 18
VQD C12 C13 DOUB Y N 19
VQD O22 C21 SING N N 20
VQD C20 C21 SING N N 21
VQD C20 C19 SING N N 22
VQD C09 C08 DOUB Y N 23
VQD C09 C14 SING Y N 24
VQD C13 C14 SING Y N 25
VQD C08 C07 SING Y N 26
VQD C14 C15 DOUB Y N 27
VQD C19 N36 SING Y N 28
VQD C19 C18 DOUB Y N 29
VQD N36 N37 DOUB Y N 30
VQD C18 N17 SING Y N 31
VQD C07 C06 SING N N 32
VQD C07 C16 DOUB Y N 33
VQD C15 C16 SING Y N 34
VQD N37 N17 SING Y N 35
VQD N17 C05 SING N N 36
VQD C06 C05 SING N N 37
VQD C05 C04 SING N N 38
VQD C04 C03 SING N N 39
VQD C03 O38 DOUB N N 40
VQD C03 N02 SING N N 41
VQD N02 O01 SING N N 42
VQD C10 H1 SING N N 43
VQD C11 H2 SING N N 44
VQD C12 H3 SING N N 45
VQD C13 H4 SING N N 46
VQD C15 H5 SING N N 47
VQD C16 H6 SING N N 48
VQD C18 H7 SING N N 49
VQD C20 H8 SING N N 50
VQD C21 H9 SING N N 51
VQD C21 H10 SING N N 52
VQD C04 H11 SING N N 53
VQD C04 H12 SING N N 54
VQD C05 H13 SING N N 55
VQD C06 H14 SING N N 56
VQD C06 H15 SING N N 57
VQD C08 H16 SING N N 58
VQD C23 H17 SING N N 59
VQD C23 H18 SING N N 60
VQD C24 H19 SING N N 61
VQD C24 H20 SING N N 62
VQD C28 H21 SING N N 63
VQD C29 H22 SING N N 64
VQD C34 H23 SING N N 65
VQD N02 H24 SING N N 66
VQD O01 H25 SING N N 67
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VQD SMILES ACDLabs 12.01 c1c5c(ccc1)ccc(CC(CC(=O)NO)n2cc(nn2)C3COCCN3C(=O)c4ccc(c(c4)F)F)c5
VQD InChI InChI 1.03 InChI=1S/C27H25F2N5O4/c28-22-8-7-20(13-23(22)29)27(36)33-9-10-38-16-25(33)24-15-34(32-30-24)21(14-26(35)31-37)12-17-5-6-18-3-1-2-4-19(18)11-17/h1-8,11,13,15,21,25,37H,9-10,12,14,16H2,(H,31,35)/t21-,25+/m1/s1
VQD InChIKey InChI 1.03 DDQJIEMCJUWZNL-BWKNWUBXSA-N
VQD SMILES_CANONICAL CACTVS 3.385 ONC(=O)C[C@@H](Cc1ccc2ccccc2c1)n3cc(nn3)[C@@H]4COCCN4C(=O)c5ccc(F)c(F)c5
VQD SMILES CACTVS 3.385 ONC(=O)C[CH](Cc1ccc2ccccc2c1)n3cc(nn3)[CH]4COCCN4C(=O)c5ccc(F)c(F)c5
VQD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 c1ccc2cc(ccc2c1)C[C@H](CC(=O)NO)n3cc(nn3)[C@@H]4COCCN4C(=O)c5ccc(c(c5)F)F
VQD SMILES "OpenEye OEToolkits" 2.0.7 c1ccc2cc(ccc2c1)CC(CC(=O)NO)n3cc(nn3)C4COCCN4C(=O)c5ccc(c(c5)F)F
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
VQD "SYSTEMATIC NAME" ACDLabs 12.01 (3R)-3-{4-[(3R)-4-(3,4-difluorobenzene-1-carbonyl)morpholin-3-yl]-1H-1,2,3-triazol-1-yl}-N-hydroxy-4-(naphthalen-2-yl)butanamide
VQD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 (3~{R})-3-[4-[(3~{R})-4-[3,4-bis(fluoranyl)phenyl]carbonylmorpholin-3-yl]-1,2,3-triazol-1-yl]-4-naphthalen-2-yl-~{N}-oxidanyl-butanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VQD 'Create component' 2020-09-08 RCSB
VQD 'Initial release' 2021-09-22 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
VQD C10 C 19.720 0.751 1
VQD C11 C 21.079 1.522 2
VQD C12 C 21.079 3.084 3
VQD C13 C 19.720 3.855 4
VQD C14 C 18.380 3.053 5
VQD C15 C 17.081 3.803 6
VQD C16 C 15.781 3.053 7
VQD C18 C 10.514 1.413 8
VQD C19 C 9.510 0.298 9
VQD C20 C 8.018 0.455 10
VQD C21 C 7.408 1.825 11
VQD C03 C 11.884 3.803 12
VQD C04 C 13.183 3.053 13
VQD C05 C 13.183 1.553 14
VQD C06 C 14.482 0.803 15
VQD C07 C 15.781 1.553 16
VQD C08 C 17.081 0.803 17
VQD C09 C 18.380 1.553 18
VQD C23 C 5.035 0.769 19
VQD C24 C 5.645 -0.602 20
VQD C26 C 7.747 -2.129 21
VQD C27 C 6.865 -3.342 22
VQD C28 C 7.475 -4.713 23
VQD C29 C 6.594 -5.926 24
VQD C30 C 5.102 -5.769 25
VQD C32 C 4.492 -4.399 26
VQD C34 C 5.373 -3.186 27
VQD F31 F 4.220 -6.983 28
VQD F33 F 3.000 -4.242 29
VQD N02 N 11.884 5.303 30
VQD N17 N 11.884 0.803 31
VQD N25 N 7.137 -0.758 32
VQD N36 N 10.260 -1.001 33
VQD N37 N 11.727 -0.689 34
VQD O01 O 10.585 6.053 35
VQD O22 O 5.917 1.982 36
VQD O35 O 9.239 -2.286 37
VQD O38 O 10.585 3.053 38
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
VQD F31 C30 SINGLE NONE 1
VQD C30 C29 SINGLE NONE 2
VQD C30 C32 DOUBLE NONE 3
VQD C29 C28 DOUBLE NONE 4
VQD F33 C32 SINGLE NONE 5
VQD C32 C34 SINGLE NONE 6
VQD C28 C27 SINGLE NONE 7
VQD C34 C27 DOUBLE NONE 8
VQD C27 C26 SINGLE NONE 9
VQD C26 O35 DOUBLE NONE 10
VQD C26 N25 SINGLE NONE 11
VQD C23 C24 SINGLE NONE 12
VQD C23 O22 SINGLE NONE 13
VQD C24 N25 SINGLE NONE 14
VQD C11 C10 DOUBLE NONE 15
VQD C11 C12 SINGLE NONE 16
VQD N25 C20 SINGLE NONE 17
VQD C10 C09 SINGLE NONE 18
VQD C12 C13 DOUBLE NONE 19
VQD O22 C21 SINGLE NONE 20
VQD C20 C21 SINGLE NONE 21
VQD C20 C19 SINGLE BEGINWEDGE 22
VQD C09 C08 DOUBLE NONE 23
VQD C09 C14 SINGLE NONE 24
VQD C13 C14 SINGLE NONE 25
VQD C08 C07 SINGLE NONE 26
VQD C14 C15 DOUBLE NONE 27
VQD C19 N36 SINGLE NONE 28
VQD C19 C18 DOUBLE NONE 29
VQD N36 N37 DOUBLE NONE 30
VQD C18 N17 SINGLE NONE 31
VQD C07 C06 SINGLE NONE 32
VQD C07 C16 DOUBLE NONE 33
VQD C15 C16 SINGLE NONE 34
VQD N37 N17 SINGLE NONE 35
VQD N17 C05 SINGLE NONE 36
VQD C05 C06 SINGLE BEGINWEDGE 37
VQD C05 C04 SINGLE NONE 38
VQD C04 C03 SINGLE NONE 39
VQD C03 O38 DOUBLE NONE 40
VQD C03 N02 SINGLE NONE 41
VQD N02 O01 SINGLE NONE 42
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
VQD MurckoScaffold S1 scaffold 'O=C(c1ccccc1)N1CCOC[C@H]1c1cn(CCc2ccc3ccccc3c2)nn1' InChI=1S/C25H24N4O2/c30-25(21-7-2-1-3-8-21)29-14-15-31-18-24(29)23-17-28(27-26-23)13-12-19-10-11-20-6-4-5-9-22(20)16-19/h1-11,16-17,24H,12-15,18H2/t24-/m0/s1 QQVWUFRHOTUOAD-DEOSSOPVSA-N
VQD amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
VQD napthalene F2 fragment c1ccc2ccccc2c1 InChI=1S/C10H8/c1-2-6-10-8-4-3-7-9(10)5-1/h1-8H UFWIBTONFRDIAS-UHFFFAOYSA-N
VQD phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
VQD Z2856434791 F4 fragment Fc1cccc(CN2CCOCC2)c1 InChI=1S/C11H14FNO/c12-11-3-1-2-10(8-11)9-13-4-6-14-7-5-13/h1-3,8H,4-7,9H2 CDBLCTFHNBQXJS-UHFFFAOYSA-N
VQD Z1271660837 F5 fragment CCNCc1cn(C)nn1 InChI=1S/C6H12N4/c1-3-7-4-6-5-10(2)9-8-6/h5,7H,3-4H2,1-2H3 LOLVREZTZUWBEQ-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
VQD C10 S1 1
VQD C11 S1 1
VQD C12 S1 1
VQD C13 S1 1
VQD C14 S1 1
VQD C15 S1 1
VQD C16 S1 1
VQD C18 S1 1
VQD C19 S1 1
VQD C20 S1 1
VQD C21 S1 1
VQD C05 S1 1
VQD C06 S1 1
VQD C07 S1 1
VQD C08 S1 1
VQD C09 S1 1
VQD C23 S1 1
VQD C24 S1 1
VQD C26 S1 1
VQD C27 S1 1
VQD C28 S1 1
VQD C29 S1 1
VQD C30 S1 1
VQD C32 S1 1
VQD C34 S1 1
VQD N17 S1 1
VQD N25 S1 1
VQD N36 S1 1
VQD N37 S1 1
VQD O22 S1 1
VQD O35 S1 1
VQD N02 F1 1
VQD C03 F1 1
VQD O38 F1 1
VQD C04 F1 1
VQD N25 F1 2
VQD C26 F1 2
VQD O35 F1 2
VQD C27 F1 2
VQD C11 F2 1
VQD C12 F2 1
VQD C13 F2 1
VQD C14 F2 1
VQD C09 F2 1
VQD C10 F2 1
VQD C08 F2 1
VQD C07 F2 1
VQD C16 F2 1
VQD C15 F2 1
VQD C10 F3 1
VQD C11 F3 1
VQD C12 F3 1
VQD C13 F3 1
VQD C14 F3 1
VQD C09 F3 1
VQD C14 F3 2
VQD C09 F3 2
VQD C08 F3 2
VQD C07 F3 2
VQD C16 F3 2
VQD C15 F3 2
VQD C27 F3 3
VQD C28 F3 3
VQD C29 F3 3
VQD C30 F3 3
VQD C32 F3 3
VQD C34 F3 3
VQD F33 F4 1
VQD C32 F4 1
VQD C30 F4 1
VQD C29 F4 1
VQD C28 F4 1
VQD C27 F4 1
VQD C26 F4 1
VQD N25 F4 1
VQD C24 F4 1
VQD C23 F4 1
VQD O22 F4 1
VQD C21 F4 1
VQD C20 F4 1
VQD C34 F4 1
VQD C23 F5 1
VQD C24 F5 1
VQD N25 F5 1
VQD C20 F5 1
VQD C19 F5 1
VQD C18 F5 1
VQD N17 F5 1
VQD C05 F5 1
VQD N37 F5 1
VQD N36 F5 1
VQD C27 F5 2
VQD C26 F5 2
VQD N25 F5 2
VQD C20 F5 2
VQD C19 F5 2
VQD C18 F5 2
VQD N17 F5 2
VQD C05 F5 2
VQD N37 F5 2
VQD N36 F5 2
#
_pdbe_chem_comp_rdkit_properties.comp_id VQD
_pdbe_chem_comp_rdkit_properties.exactmw 521.187
_pdbe_chem_comp_rdkit_properties.amw 521.524
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 38
_pdbe_chem_comp_rdkit_properties.NumAtoms 63
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.259
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 251.396
_pdbe_chem_comp_rdkit_properties.tpsa 109.580
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.010
_pdbe_chem_comp_rdkit_properties.CrippenMR 129.208
_pdbe_chem_comp_rdkit_properties.chi0v 18.125
_pdbe_chem_comp_rdkit_properties.chi1v 9.842
_pdbe_chem_comp_rdkit_properties.chi2v 4.405
_pdbe_chem_comp_rdkit_properties.chi3v 4.405
_pdbe_chem_comp_rdkit_properties.chi4v 2.796
_pdbe_chem_comp_rdkit_properties.chi0n 43.125
_pdbe_chem_comp_rdkit_properties.chi1n 22.198
_pdbe_chem_comp_rdkit_properties.chi2n 4.405
_pdbe_chem_comp_rdkit_properties.chi3n 4.405
_pdbe_chem_comp_rdkit_properties.chi4n 2.796
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.220
_pdbe_chem_comp_rdkit_properties.kappa1 9.209
_pdbe_chem_comp_rdkit_properties.kappa2 11.032
_pdbe_chem_comp_rdkit_properties.kappa3 5.384
_pdbe_chem_comp_rdkit_properties.Phi 2.674
#
_pdbe_chem_comp_external_mappings.comp_id VQD
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 156599531
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
VQD C10 -5.186 -3.046 -0.545 ETKDGv3 1
VQD C11 -5.332 -4.334 -0.209 ETKDGv3 2
VQD C12 -4.524 -4.950 0.870 ETKDGv3 3
VQD C13 -3.614 -4.244 1.554 ETKDGv3 4
VQD C14 -3.395 -2.818 1.243 ETKDGv3 5
VQD C15 -2.495 -2.081 1.909 ETKDGv3 6
VQD C16 -2.304 -0.658 1.561 ETKDGv3 7
VQD C18 0.412 1.380 0.415 ETKDGv3 8
VQD C19 1.223 0.370 0.692 ETKDGv3 9
VQD C20 2.290 0.340 1.756 ETKDGv3 10
VQD C21 1.623 0.227 3.139 ETKDGv3 11
VQD C03 -1.337 1.384 -3.410 ETKDGv3 12
VQD C04 -2.275 1.016 -2.297 ETKDGv3 13
VQD C05 -1.764 1.536 -0.938 ETKDGv3 14
VQD C06 -2.805 1.350 0.190 ETKDGv3 15
VQD C07 -3.026 -0.093 0.575 ETKDGv3 16
VQD C08 -4.031 -0.908 -0.152 ETKDGv3 17
VQD C09 -4.203 -2.201 0.162 ETKDGv3 18
VQD C23 3.168 1.593 4.174 ETKDGv3 19
VQD C24 3.983 1.822 2.900 ETKDGv3 20
VQD C26 3.498 2.210 0.485 ETKDGv3 21
VQD C27 3.689 1.479 -0.788 ETKDGv3 22
VQD C28 4.327 0.138 -0.798 ETKDGv3 23
VQD C29 4.472 -0.533 -1.947 ETKDGv3 24
VQD C30 4.016 0.066 -3.218 ETKDGv3 25
VQD C32 3.466 1.287 -3.222 ETKDGv3 26
VQD C34 3.296 2.026 -1.953 ETKDGv3 27
VQD F31 4.171 -0.618 -4.378 ETKDGv3 28
VQD F33 3.065 1.851 -4.387 ETKDGv3 29
VQD N02 -0.462 0.404 -3.977 ETKDGv3 30
VQD N17 -0.487 0.916 -0.579 ETKDGv3 31
VQD N25 3.170 1.527 1.714 ETKDGv3 32
VQD N36 0.841 -0.765 -0.084 ETKDGv3 33
VQD N37 -0.154 -0.426 -0.799 ETKDGv3 34
VQD O01 0.382 0.734 -4.983 ETKDGv3 35
VQD O22 2.586 0.305 4.170 ETKDGv3 36
VQD O35 3.616 3.466 0.493 ETKDGv3 37
VQD O38 -1.309 2.570 -3.835 ETKDGv3 38
VQD H1 -5.794 -2.629 -1.339 ETKDGv3 39
VQD H2 -6.056 -4.943 -0.735 ETKDGv3 40
VQD H3 -4.675 -5.995 1.108 ETKDGv3 41
VQD H4 -3.041 -4.726 2.337 ETKDGv3 42
VQD H5 -1.897 -2.517 2.700 ETKDGv3 43
VQD H6 -1.566 -0.083 2.106 ETKDGv3 44
VQD H7 0.390 2.353 0.888 ETKDGv3 45
VQD H8 2.911 -0.569 1.607 ETKDGv3 46
VQD H9 1.113 -0.758 3.213 ETKDGv3 47
VQD H10 0.836 1.006 3.273 ETKDGv3 48
VQD H11 -2.405 -0.086 -2.267 ETKDGv3 49
VQD H12 -3.270 1.462 -2.515 ETKDGv3 50
VQD H13 -1.599 2.632 -1.040 ETKDGv3 51
VQD H14 -2.474 1.928 1.081 ETKDGv3 52
VQD H15 -3.773 1.801 -0.122 ETKDGv3 53
VQD H16 -4.621 -0.454 -0.939 ETKDGv3 54
VQD H17 2.395 2.388 4.292 ETKDGv3 55
VQD H18 3.847 1.671 5.049 ETKDGv3 56
VQD H19 4.336 2.877 2.888 ETKDGv3 57
VQD H20 4.872 1.155 2.904 ETKDGv3 58
VQD H21 4.700 -0.297 0.120 ETKDGv3 59
VQD H22 4.940 -1.509 -1.950 ETKDGv3 60
VQD H23 2.828 3.003 -1.977 ETKDGv3 61
VQD H24 -0.460 -0.575 -3.612 ETKDGv3 62
VQD H25 -0.125 0.545 -5.813 ETKDGv3 63
#