data_VIB
#
_chem_comp.id VIB
_chem_comp.name 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C12 H17 N4 O S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "THIAMIN; VITAMIN B1"
_chem_comp.pdbx_formal_charge 1
_chem_comp.pdbx_initial_date 2001-04-17
_chem_comp.pdbx_modified_date 2020-01-26
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 265.355
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code VIB
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1IG3
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VIB CM2 CM2 C 0 1 N N N N N N 7.184 69.654 25.180 5.038 1.578 1.354 CM2 VIB 1
VIB N4A N4A N 0 1 N N N N N N 4.578 71.418 21.377 2.558 -2.230 -0.166 N4A VIB 2
VIB CM4 CM4 C 0 1 N N N N N N 6.456 72.345 16.851 -1.096 1.522 -1.063 CM4 VIB 3
VIB O1 O1 O 0 1 N N N N N N 5.885 69.796 12.826 -5.653 1.650 0.322 O1 VIB 4
VIB C7 C7 C 0 1 N N N N N N 6.138 69.427 14.175 -4.614 0.769 -0.110 C7 VIB 5
VIB C6 C6 C 0 1 N N N N N N 5.176 70.216 15.068 -3.432 0.861 0.857 C6 VIB 6
VIB C2 C2 C 0 1 Y N N N N N 5.981 69.324 18.758 -0.615 -2.005 -0.142 C2 VIB 7
VIB S1 S1 S 0 1 Y N N N N N 5.267 68.452 17.383 -2.048 -1.783 0.814 S1 VIB 8
VIB C5 C5 C 0 1 Y N N N N N 5.545 70.005 16.519 -2.337 -0.068 0.401 C5 VIB 9
VIB C4 C4 C 0 1 Y N N N N N 6.111 70.939 17.325 -1.292 0.167 -0.433 C4 VIB 10
VIB N3 N3 N 1 1 Y N N N N N 6.319 70.514 18.520 -0.458 -0.820 -0.686 N3 VIB 11
VIB C7A C7A C 0 1 N N N N N N 6.917 71.344 19.588 0.673 -0.590 -1.588 C7A VIB 12
VIB C4A C4A C 0 1 Y N N N N N 5.814 70.960 21.877 2.720 -0.854 -0.132 C4A VIB 13
VIB N3A N3A N 0 1 Y N N N N N 5.898 70.553 23.219 3.730 -0.309 0.539 N3A VIB 14
VIB C2A C2A C 0 1 Y N N N N N 7.105 70.091 23.750 3.884 0.999 0.577 C2A VIB 15
VIB N1A N1A N 0 1 Y N N N N N 8.245 70.041 22.931 3.061 1.814 -0.050 N1A VIB 16
VIB C6A C6A C 0 1 Y N N N N N 8.176 70.447 21.584 2.034 1.346 -0.745 C6A VIB 17
VIB C5A C5A C 0 1 Y N N N N N 6.968 70.911 21.045 1.829 -0.018 -0.808 C5A VIB 18
VIB HM21 1HM2 H 0 0 N N N N N N 8.147 69.285 25.603 4.726 1.767 2.381 HM21 VIB 19
VIB HM22 2HM2 H 0 0 N N N N N N 6.814 70.487 25.822 5.869 0.873 1.351 HM22 VIB 20
VIB HM23 3HM2 H 0 0 N N N N N N 6.404 68.875 25.352 5.354 2.513 0.892 HM23 VIB 21
VIB H4A1 1H4A H 0 0 N N N N N N 4.517 71.713 20.402 1.820 -2.619 -0.661 H4A1 VIB 22
VIB H4A2 2H4A H 0 0 N N N N N N 4.244 72.176 21.971 3.181 -2.803 0.307 H4A2 VIB 23
VIB HM41 1HM4 H 0 0 N N N N N N 6.920 73.112 17.513 -0.396 2.104 -0.464 HM41 VIB 24
VIB HM42 2HM4 H 0 0 N N N N N N 7.106 72.243 15.950 -0.699 1.400 -2.071 HM42 VIB 25
VIB HM43 3HM4 H 0 0 N N N N N N 5.526 72.790 16.425 -2.053 2.042 -1.111 HM43 VIB 26
VIB HO1 HO1 H 0 1 N N N N N N 6.481 69.306 12.272 -6.377 1.562 -0.313 HO1 VIB 27
VIB HC71 1HC7 H 0 0 N N N N N N 6.075 68.326 14.340 -4.288 1.055 -1.110 HC71 VIB 28
VIB HC72 2HC7 H 0 0 N N N N N N 7.205 69.561 14.466 -4.990 -0.254 -0.129 HC72 VIB 29
VIB HC61 1HC6 H 0 0 N N N N N N 5.139 71.296 14.795 -3.758 0.575 1.857 HC61 VIB 30
VIB HC62 2HC6 H 0 0 N N N N N N 4.109 69.963 14.863 -3.057 1.884 0.876 HC62 VIB 31
VIB HC2 HC2 H 0 1 N N N N N N 6.226 69.116 19.812 -0.009 -2.892 -0.260 HC2 VIB 32
VIB H7A1 1H7A H 0 0 N N N N N N 7.959 71.587 19.276 0.378 0.111 -2.368 H7A1 VIB 33
VIB H7A2 2H7A H 0 0 N N N N N N 6.418 72.340 19.554 0.973 -1.534 -2.042 H7A2 VIB 34
VIB H6AC CH6A H 0 0 N N N N N N 9.074 70.401 20.946 1.365 2.024 -1.255 H6AC VIB 35
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VIB CM2 C2A SING N N 1
VIB CM2 HM21 SING N N 2
VIB CM2 HM22 SING N N 3
VIB CM2 HM23 SING N N 4
VIB N4A C4A SING N N 5
VIB N4A H4A1 SING N N 6
VIB N4A H4A2 SING N N 7
VIB CM4 C4 SING N N 8
VIB CM4 HM41 SING N N 9
VIB CM4 HM42 SING N N 10
VIB CM4 HM43 SING N N 11
VIB O1 C7 SING N N 12
VIB O1 HO1 SING N N 13
VIB C7 C6 SING N N 14
VIB C7 HC71 SING N N 15
VIB C7 HC72 SING N N 16
VIB C6 C5 SING N N 17
VIB C6 HC61 SING N N 18
VIB C6 HC62 SING N N 19
VIB C2 S1 SING Y N 20
VIB C2 N3 DOUB Y N 21
VIB C2 HC2 SING N N 22
VIB S1 C5 SING Y N 23
VIB C5 C4 DOUB Y N 24
VIB C4 N3 SING Y N 25
VIB N3 C7A SING N N 26
VIB C7A C5A SING N N 27
VIB C7A H7A1 SING N N 28
VIB C7A H7A2 SING N N 29
VIB C4A N3A SING Y N 30
VIB C4A C5A DOUB Y N 31
VIB N3A C2A DOUB Y N 32
VIB C2A N1A SING Y N 33
VIB N1A C6A DOUB Y N 34
VIB C6A C5A SING Y N 35
VIB C6A H6AC SING N N 36
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VIB SMILES ACDLabs 10.04 n1c(c(cnc1C)C[n+]2c(c(sc2)CCO)C)N
VIB SMILES_CANONICAL CACTVS 3.341 Cc1ncc(C[n+]2csc(CCO)c2C)c(N)n1
VIB SMILES CACTVS 3.341 Cc1ncc(C[n+]2csc(CCO)c2C)c(N)n1
VIB SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 Cc1c(sc[n+]1Cc2cnc(nc2N)C)CCO
VIB SMILES "OpenEye OEToolkits" 1.5.0 Cc1c(sc[n+]1Cc2cnc(nc2N)C)CCO
VIB InChI InChI 1.03 InChI=1S/C12H17N4OS/c1-8-11(3-4-17)18-7-16(8)6-10-5-14-9(2)15-12(10)13/h5,7,17H,3-4,6H2,1-2H3,(H2,13,14,15)/q+1
VIB InChIKey InChI 1.03 JZRWCGZRTZMZEH-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
VIB "SYSTEMATIC NAME" ACDLabs 10.04 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-hydroxyethyl)-4-methyl-1,3-thiazol-3-ium
VIB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 2-[3-[(4-amino-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-1,3-thiazol-3-ium-5-yl]ethanol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VIB 'Create component' 2001-04-17 EBI
VIB 'Modify descriptor' 2011-06-04 RCSB
VIB 'Modify synonyms' 2019-12-17 PDBE
VIB 'Modify synonyms' 2020-01-26 RCSB
#
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1 VIB THIAMIN ? ?
2 VIB "VITAMIN B1" ? ?
#
_pdbe_chem_comp_drugbank_details.comp_id VIB
_pdbe_chem_comp_drugbank_details.drugbank_id DB00152
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Thiamine
_pdbe_chem_comp_drugbank_details.description
'Thiamine or thiamin, also known as vitamin B1, is a colorless compound with the chemical formula C12H17N4OS. It is soluble in water and insoluble in alcohol. Thiamine decomposes if heated. Thiamine was first discovered by Umetaro Suzuki in Japan when researching how rice bran cured patients of Beriberi. Thiamine plays a key role in intracellular glucose metabolism and it is thought that thiamine inhibits the effect of glucose and insulin on arterial smooth muscle cell proliferation. Thiamine plays an important role in helping the body convert carbohydrates and fat into energy. It is essential for normal growth and development and helps to maintain proper functioning of the heart and the nervous and digestive systems. Thiamine cannot be stored in the body; however, once absorbed, the vitamin is concentrated in muscle tissue.'
_pdbe_chem_comp_drugbank_details.cas_number 70-16-6
_pdbe_chem_comp_drugbank_details.mechanism_of_action
'It is thought that the mechanism of action of thiamine on endothelial cells is related to a reduction in intracellular protein glycation by redirecting the glycolytic flux. Thiamine is mainly the transport form of the vitamin, while the active forms are phosphorylated thiamine derivatives. Natural derivatives of thiamine phosphate, such as thiamine monophosphate (ThMP), thiamine diphosphate (ThDP), also sometimes called thiamine pyrophosphate (TPP), thiamine triphosphate (ThTP), and thiamine triphosphate (AThTP), that act as coenzymes in addition to their each unique biological functions.'
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
VIB THIAMIN wwPDB ?
VIB 'VITAMIN B1' wwPDB ?
VIB Aneurin DrugBank ?
VIB 'Antiberiberi factor' DrugBank ?
VIB Thiamine DrugBank ?
VIB thiamine(1+) DrugBank ?
VIB 'thiamine(1+) ion' DrugBank ?
VIB thiaminium DrugBank ?
VIB Thiaminum DrugBank ?
VIB 'Vitamin B1' DrugBank ?
VIB 'Betalin S' DrugBank 'International brand'
VIB Biamine DrugBank 'International brand'
#
_pdbe_chem_comp_drugbank_classification.comp_id VIB
_pdbe_chem_comp_drugbank_classification.drugbank_id DB00152
_pdbe_chem_comp_drugbank_classification.parent Thiamines
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class Diazines
_pdbe_chem_comp_drugbank_classification.superclass 'Organoheterocyclic compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as thiamines. These are compounds containing a thiamine moiety, which is structurally characterized by a 3-[(4-Amino-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-thiazol-5-yl backbone.'
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
VIB DB00152 'Thiamine pyrophosphokinase 1' Humans Q9H3S4 yes 1
VIB DB00152 'Pyruvate dehydrogenase E1 component' 'Escherichia coli (strain K12)' P0AFG8 yes 2
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
VIB CM2 C 9.410 -5.263 1
VIB N4A N 4.213 -5.263 2
VIB CM4 C 6.854 -0.344 3
VIB O1 O 6.117 5.343 4
VIB C7 C 5.235 4.130 5
VIB C6 C 5.845 2.759 6
VIB C2 C 3.000 0.119 7
VIB S1 S 3.463 1.546 8
VIB C5 C 4.963 1.546 9
VIB C4 C 5.427 0.119 10
VIB N3 N 4.213 -0.763 11
VIB C7A C 4.213 -2.263 12
VIB C4A C 5.513 -4.513 13
VIB N3A N 6.812 -5.263 14
VIB C2A C 8.111 -4.513 15
VIB N1A N 8.111 -3.013 16
VIB C6A C 6.812 -2.263 17
VIB C5A C 5.513 -3.013 18
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
VIB CM2 C2A SINGLE NONE 1
VIB N4A C4A SINGLE NONE 2
VIB CM4 C4 SINGLE NONE 3
VIB O1 C7 SINGLE NONE 4
VIB C7 C6 SINGLE NONE 5
VIB C6 C5 SINGLE NONE 6
VIB C2 S1 SINGLE NONE 7
VIB C2 N3 DOUBLE NONE 8
VIB S1 C5 SINGLE NONE 9
VIB C5 C4 DOUBLE NONE 10
VIB C4 N3 SINGLE NONE 11
VIB N3 C7A SINGLE NONE 12
VIB C7A C5A SINGLE NONE 13
VIB C4A N3A DOUBLE NONE 14
VIB C4A C5A SINGLE NONE 15
VIB N3A C2A SINGLE NONE 16
VIB C2A N1A DOUBLE NONE 17
VIB N1A C6A SINGLE NONE 18
VIB C6A C5A DOUBLE NONE 19
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
VIB MurckoScaffold S1 scaffold 'c1ncc(C[n+]2ccsc2)cn1' InChI=1S/C8H8N3S/c1-2-12-7-11(1)5-8-3-9-6-10-4-8/h1-4,6-7H,5H2/q+1 VOZNMBMJVMRVOB-UHFFFAOYSA-N
VIB pyrimidine F1 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
VIB thiazole F2 fragment c1cscn1 InChI=1S/C3H3NS/c1-2-5-3-4-1/h1-3H FZWLAAWBMGSTSO-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
VIB C2 S1 1
VIB S1 S1 1
VIB C5 S1 1
VIB C4 S1 1
VIB N3 S1 1
VIB C7A S1 1
VIB C4A S1 1
VIB N3A S1 1
VIB C2A S1 1
VIB N1A S1 1
VIB C6A S1 1
VIB C5A S1 1
VIB C5A F1 1
VIB C4A F1 1
VIB N3A F1 1
VIB C2A F1 1
VIB N1A F1 1
VIB C6A F1 1
VIB C5 F2 1
VIB C4 F2 1
VIB N3 F2 1
VIB C2 F2 1
VIB S1 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id VIB
_pdbe_chem_comp_rdkit_properties.exactmw 265.112
_pdbe_chem_comp_rdkit_properties.amw 265.362
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 18
_pdbe_chem_comp_rdkit_properties.NumAtoms 35
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.417
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 134.044
_pdbe_chem_comp_rdkit_properties.tpsa 75.910
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.008
_pdbe_chem_comp_rdkit_properties.CrippenMR 68.436
_pdbe_chem_comp_rdkit_properties.chi0v 9.422
_pdbe_chem_comp_rdkit_properties.chi1v 5.218
_pdbe_chem_comp_rdkit_properties.chi2v 2.548
_pdbe_chem_comp_rdkit_properties.chi3v 2.548
_pdbe_chem_comp_rdkit_properties.chi4v 1.624
_pdbe_chem_comp_rdkit_properties.chi0n 25.605
_pdbe_chem_comp_rdkit_properties.chi1n 12.704
_pdbe_chem_comp_rdkit_properties.chi2n 1.775
_pdbe_chem_comp_rdkit_properties.chi3n 1.775
_pdbe_chem_comp_rdkit_properties.chi4n 1.023
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.530
_pdbe_chem_comp_rdkit_properties.kappa1 3.317
_pdbe_chem_comp_rdkit_properties.kappa2 5.410
_pdbe_chem_comp_rdkit_properties.kappa3 2.651
_pdbe_chem_comp_rdkit_properties.Phi 0.997
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
VIB UniChem DrugBank DB00152
VIB UniChem 'Guide to Pharmacology' 4628
VIB UniChem 'Guide to Pharmacology' 4629
VIB UniChem 'KEGG LIGAND' C00378
VIB UniChem ChEBI 18385
VIB UniChem ZINC ZINC000000049153
VIB UniChem fdasrs 4ABT0J945J
VIB UniChem PharmGKB PA451652
VIB UniChem HMDB HMDB0000235
VIB UniChem NMRShiftDB 60018864
VIB UniChem LINCS LSM-5996
VIB UniChem BindingDb 50373877
VIB UniChem DrugCentral 2832
VIB UniChem MetaboLights MTBLC18385
VIB UniChem BRENDA 16149
VIB UniChem BRENDA 242659
VIB UniChem BRENDA 642
VIB UniChem Rhea 18385
VIB UniChem DailyMed THIAMINE
VIB UniChem ClinicalTrials ANEURINE
VIB UniChem ClinicalTrials THIAMINE
VIB UniChem ClinicalTrials 'THIAMINE CHLORIDE HYDROCHLORIDE'
VIB UniChem ClinicalTrials 'THIAMINE HYDROCHLORIDE'
VIB UniChem ClinicalTrials 'THIAMINE MONONITRATE'
VIB UniChem ClinicalTrials 'THIAMINE NITRATE'
VIB UniChem ClinicalTrials 'VITAMIN B1'
VIB UniChem rxnorm THIAMINE
VIB UniChem rxnorm 'THIAMINE DISULFIDE'
VIB UniChem rxnorm 'THIAMINE HYDROCHLORIDE'
VIB UniChem rxnorm 'THIAMINE ION'
VIB UniChem rxnorm 'THIAMINE MONONITRATE'
VIB UniChem 'Probes And Drugs' PD010200
VIB UniChem CCDC CEKJOR
VIB UniChem 'EPA CompTox Dashboard' DTXSID50220251
VIB UniChem eMolecules 1180877
VIB UniChem SureChEMBL SCHEMBL10075
VIB UniChem SureChEMBL SCHEMBL22129283
VIB UniChem PubChem 1130
VIB UniChem Mcule MCULE-2198445125
VIB UniChem Recon thm
VIB UniChem Nikkaji J209.352I
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
VIB CM2 4.800 0.634 2.294 ETKDGv3 1
VIB N4A 2.794 -2.203 -1.133 ETKDGv3 2
VIB CM4 -1.009 -1.022 0.839 ETKDGv3 3
VIB O1 -4.446 -1.301 0.428 ETKDGv3 4
VIB C7 -4.755 0.009 0.814 ETKDGv3 5
VIB C6 -3.496 0.731 1.293 ETKDGv3 6
VIB C2 -1.133 1.551 -1.837 ETKDGv3 7
VIB S1 -2.619 2.143 -1.070 ETKDGv3 8
VIB C5 -2.497 0.883 0.178 ETKDGv3 9
VIB C4 -1.422 0.113 -0.063 ETKDGv3 10
VIB N3 -0.636 0.525 -1.211 ETKDGv3 11
VIB C7A 0.612 -0.123 -1.642 ETKDGv3 12
VIB C4A 2.752 -0.990 -0.376 ETKDGv3 13
VIB N3A 3.663 -0.789 0.532 ETKDGv3 14
VIB C2A 3.718 0.429 1.287 ETKDGv3 15
VIB N1A 2.876 1.386 1.032 ETKDGv3 16
VIB C6A 1.848 1.224 0.045 ETKDGv3 17
VIB C5A 1.723 0.064 -0.628 ETKDGv3 18
VIB HM21 5.657 1.151 1.816 ETKDGv3 19
VIB HM22 4.426 1.250 3.140 ETKDGv3 20
VIB HM23 5.140 -0.345 2.691 ETKDGv3 21
VIB H4A1 2.234 -2.340 -2.002 ETKDGv3 22
VIB H4A2 3.481 -2.948 -0.881 ETKDGv3 23
VIB HM41 -0.485 -0.613 1.728 ETKDGv3 24
VIB HM42 -0.334 -1.729 0.320 ETKDGv3 25
VIB HM43 -1.892 -1.606 1.170 ETKDGv3 26
VIB HO1 -5.299 -1.707 0.124 ETKDGv3 27
VIB HC71 -5.204 0.563 -0.041 ETKDGv3 28
VIB HC72 -5.493 -0.013 1.647 ETKDGv3 29
VIB HC61 -3.057 0.196 2.161 ETKDGv3 30
VIB HC62 -3.781 1.744 1.648 ETKDGv3 31
VIB HC2 -0.680 1.999 -2.712 ETKDGv3 32
VIB H7A1 0.958 0.285 -2.617 ETKDGv3 33
VIB H7A2 0.393 -1.196 -1.806 ETKDGv3 34
VIB H6AC 1.165 2.045 -0.127 ETKDGv3 35
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