data_UZS
#
_chem_comp.id UZS
_chem_comp.name N-hydroxy-7-sulfanylheptanamide
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula 'C7 H15 N O2 S'
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-06-09
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 177.264
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code UZS
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6XCD
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
UZS O10 O1 O 0 1 N N N N N N 15.365 -7.422 8.988 5.824 -0.056 0.000 O10 UZS 1
UZS C02 C1 C 0 1 N N N N N N 11.083 -3.592 12.682 -4.016 -0.683 -0.000 C02 UZS 2
UZS C03 C2 C 0 1 N N N N N N 9.683 -3.940 12.182 -2.849 0.307 -0.000 C03 UZS 3
UZS C04 C3 C 0 1 N N N N N N 9.712 -5.187 11.306 -1.527 -0.463 -0.000 C04 UZS 4
UZS C05 C4 C 0 1 N N N N N N 10.389 -6.351 12.027 -0.360 0.526 -0.000 C05 UZS 5
UZS C06 C5 C 0 1 N N N N N N 11.088 -7.289 11.048 0.962 -0.244 0.000 C06 UZS 6
UZS C07 C6 C 0 1 N N N N N N 12.466 -7.725 11.539 2.129 0.746 0.000 C07 UZS 7
UZS C08 C7 C 0 1 N N N N N N 13.577 -7.131 10.676 3.431 -0.013 0.000 C08 UZS 8
UZS N09 N1 N 0 1 N N N N N N 14.346 -7.977 9.780 4.601 0.656 0.000 N09 UZS 9
UZS O11 O2 O 0 1 N N N N N N 13.810 -5.972 10.742 3.426 -1.225 0.000 O11 UZS 10
UZS S01 S1 S 0 1 N N N N N N 10.972 -2.759 14.292 -5.583 0.231 -0.000 S01 UZS 11
UZS H1 H1 H 0 1 N N N N N N 15.424 -6.489 9.156 6.609 0.509 0.000 H1 UZS 12
UZS H2 H2 H 0 1 N N N N N N 11.673 -4.515 12.788 -3.961 -1.309 -0.890 H2 UZS 13
UZS H3 H3 H 0 1 N N N N N N 11.574 -2.924 11.958 -3.961 -1.309 0.890 H3 UZS 14
UZS H4 H4 H 0 1 N N N N N N 9.290 -3.097 11.595 -2.904 0.934 -0.890 H4 UZS 15
UZS H5 H5 H 0 1 N N N N N N 9.027 -4.122 13.046 -2.904 0.934 0.890 H5 UZS 16
UZS H6 H6 H 0 1 N N N N N N 10.267 -4.965 10.383 -1.472 -1.090 0.890 H6 UZS 17
UZS H7 H7 H 0 1 N N N N N N 8.680 -5.472 11.053 -1.472 -1.090 -0.890 H7 UZS 18
UZS H8 H8 H 0 1 N N N N N N 9.627 -6.918 12.582 -0.415 1.153 -0.890 H8 UZS 19
UZS H9 H9 H 0 1 N N N N N N 11.134 -5.950 12.731 -0.415 1.153 0.890 H9 UZS 20
UZS H10 H10 H 0 1 N N N N N N 11.204 -6.771 10.085 1.017 -0.871 0.890 H10 UZS 21
UZS H11 H11 H 0 1 N N N N N N 10.463 -8.184 10.910 1.017 -0.871 -0.890 H11 UZS 22
UZS H12 H12 H 0 1 N N N N N N 12.530 -8.822 11.499 2.073 1.373 -0.890 H12 UZS 23
UZS H13 H13 H 0 1 N N N N N N 12.600 -7.387 12.577 2.073 1.373 0.890 H13 UZS 24
UZS H14 H14 H 0 1 N N N N N N 14.150 -8.956 9.727 4.604 1.627 0.000 H14 UZS 25
UZS H15 H15 H 0 1 N N N N N N 12.223 -2.537 14.568 -6.504 -0.749 -0.000 H15 UZS 26
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
UZS O10 N09 SING N N 1
UZS N09 C08 SING N N 2
UZS C08 O11 DOUB N N 3
UZS C08 C07 SING N N 4
UZS C06 C07 SING N N 5
UZS C06 C05 SING N N 6
UZS C04 C05 SING N N 7
UZS C04 C03 SING N N 8
UZS C03 C02 SING N N 9
UZS C02 S01 SING N N 10
UZS O10 H1 SING N N 11
UZS C02 H2 SING N N 12
UZS C02 H3 SING N N 13
UZS C03 H4 SING N N 14
UZS C03 H5 SING N N 15
UZS C04 H6 SING N N 16
UZS C04 H7 SING N N 17
UZS C05 H8 SING N N 18
UZS C05 H9 SING N N 19
UZS C06 H10 SING N N 20
UZS C06 H11 SING N N 21
UZS C07 H12 SING N N 22
UZS C07 H13 SING N N 23
UZS N09 H14 SING N N 24
UZS S01 H15 SING N N 25
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
UZS SMILES ACDLabs 12.01 'ONC(CCCCCCS)=O'
UZS InChI InChI 1.03 'InChI=1S/C7H15NO2S/c9-7(8-10)5-3-1-2-4-6-11/h10-11H,1-6H2,(H,8,9)'
UZS InChIKey InChI 1.03 XKCHGAJRKPXTNT-UHFFFAOYSA-N
UZS SMILES_CANONICAL CACTVS 3.385 'ONC(=O)CCCCCCS'
UZS SMILES CACTVS 3.385 'ONC(=O)CCCCCCS'
UZS SMILES_CANONICAL 'OpenEye OEToolkits' 2.0.7 'C(CCCS)CCC(=O)NO'
UZS SMILES 'OpenEye OEToolkits' 2.0.7 'C(CCCS)CCC(=O)NO'
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
UZS 'SYSTEMATIC NAME' ACDLabs 12.01 N-hydroxy-7-sulfanylheptanamide
UZS 'SYSTEMATIC NAME' 'OpenEye OEToolkits' 2.0.7 '~{N}-oxidanyl-7-sulfanyl-heptanamide'
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
UZS 'Create component' 2020-06-09 RCSB
UZS 'Initial release' 2021-06-09 RCSB
UZS 'Modify PCM' 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id UZS
_pdbx_chem_comp_pcm.modified_residue_id CYS
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category 'Covalent chemical modification'
_pdbx_chem_comp_pcm.position 'Amino-acid side chain'
_pdbx_chem_comp_pcm.polypeptide_position 'Any position'
_pdbx_chem_comp_pcm.comp_id_linking_atom S01
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
UZS O10 O 3.805 -0.090 1
UZS C02 C 14.198 -0.090 2
UZS C03 C 12.899 0.660 3
UZS C04 C 11.600 -0.090 4
UZS C05 C 10.301 0.660 5
UZS C06 C 9.002 -0.090 6
UZS C07 C 7.702 0.660 7
UZS C08 C 6.404 -0.090 8
UZS N09 N 5.104 0.660 9
UZS O11 O 6.404 -1.590 10
UZS S01 S 15.497 0.660 11
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
UZS O10 N09 SINGLE NONE 1
UZS N09 C08 SINGLE NONE 2
UZS C08 O11 DOUBLE NONE 3
UZS C08 C07 SINGLE NONE 4
UZS C06 C07 SINGLE NONE 5
UZS C06 C05 SINGLE NONE 6
UZS C04 C05 SINGLE NONE 7
UZS C04 C03 SINGLE NONE 8
UZS C03 C02 SINGLE NONE 9
UZS C02 S01 SINGLE NONE 10
#
_pdbe_chem_comp_substructure.comp_id UZS
_pdbe_chem_comp_substructure.substructure_name amide
_pdbe_chem_comp_substructure.id F1
_pdbe_chem_comp_substructure.substructure_type fragment
_pdbe_chem_comp_substructure.substructure_smiles CC(N)=O
_pdbe_chem_comp_substructure.substructure_inchis InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4)
_pdbe_chem_comp_substructure.substructure_inchikeys DLFVBJFMPXGRIB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
UZS N09 F1 1
UZS C08 F1 1
UZS O11 F1 1
UZS C07 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id UZS
_pdbe_chem_comp_rdkit_properties.exactmw 177.082
_pdbe_chem_comp_rdkit_properties.amw 177.269
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 3
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 11
_pdbe_chem_comp_rdkit_properties.NumAtoms 26
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.857
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 93.444
_pdbe_chem_comp_rdkit_properties.tpsa 49.330
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.372
_pdbe_chem_comp_rdkit_properties.CrippenMR 46.867
_pdbe_chem_comp_rdkit_properties.chi0v 5.988
_pdbe_chem_comp_rdkit_properties.chi1v 2.723
_pdbe_chem_comp_rdkit_properties.chi2v 0.593
_pdbe_chem_comp_rdkit_properties.chi3v 0.593
_pdbe_chem_comp_rdkit_properties.chi4v 0.247
_pdbe_chem_comp_rdkit_properties.chi0n 20.172
_pdbe_chem_comp_rdkit_properties.chi1n 9.578
_pdbe_chem_comp_rdkit_properties.chi2n 0.491
_pdbe_chem_comp_rdkit_properties.chi3n 0.491
_pdbe_chem_comp_rdkit_properties.chi4n 0.196
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.220
_pdbe_chem_comp_rdkit_properties.kappa1 1.679
_pdbe_chem_comp_rdkit_properties.kappa2 7.882
_pdbe_chem_comp_rdkit_properties.kappa3 7.679
_pdbe_chem_comp_rdkit_properties.Phi 1.203
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
UZS UniChem SureChEMBL SCHEMBL4533933
UZS UniChem PubChem 87685468
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
UZS O10 -5.285 1.002 -0.583 ETKDGv3 1
UZS C02 4.029 0.238 -0.252 ETKDGv3 2
UZS C03 2.804 -0.578 0.171 ETKDGv3 3
UZS C04 1.504 0.232 0.064 ETKDGv3 4
UZS C05 0.302 -0.596 0.532 ETKDGv3 5
UZS C06 -0.998 0.210 0.424 ETKDGv3 6
UZS C07 -2.199 -0.618 0.890 ETKDGv3 7
UZS C08 -3.462 0.181 0.778 ETKDGv3 8
UZS N09 -4.158 0.259 -0.468 ETKDGv3 9
UZS O11 -3.890 0.817 1.779 ETKDGv3 10
UZS S01 4.042 0.526 -2.051 ETKDGv3 11
UZS H1 -6.025 0.373 -0.387 ETKDGv3 12
UZS H2 4.048 1.212 0.281 ETKDGv3 13
UZS H3 4.949 -0.323 0.017 ETKDGv3 14
UZS H4 2.946 -0.897 1.227 ETKDGv3 15
UZS H5 2.736 -1.494 -0.456 ETKDGv3 16
UZS H6 1.587 1.146 0.693 ETKDGv3 17
UZS H7 1.343 0.543 -0.991 ETKDGv3 18
UZS H8 0.219 -1.512 -0.095 ETKDGv3 19
UZS H9 0.456 -0.905 1.589 ETKDGv3 20
UZS H10 -0.917 1.125 1.051 ETKDGv3 21
UZS H11 -1.152 0.519 -0.634 ETKDGv3 22
UZS H12 -2.290 -1.535 0.269 ETKDGv3 23
UZS H13 -2.053 -0.932 1.947 ETKDGv3 24
UZS H14 -3.787 -0.239 -1.308 ETKDGv3 25
UZS H15 5.251 1.246 -1.992 ETKDGv3 26
#