data_TUE
#
_chem_comp.id TUE
_chem_comp.name 7-[[5-[(methylideneamino)methyl]pyridin-3-yl]oxymethyl]quinolin-2-amine
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C17 H16 N4 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2015-08-21
_chem_comp.pdbx_modified_date 2015-10-23
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 292.335
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code TUE
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5adi
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
TUE N01 N01 N 0 1 Y N N N N N 117.391 245.669 357.661 -4.102 -1.236 -0.720 N01 TUE 1
TUE C02 C02 C 0 1 Y N N N N N 116.463 245.003 358.362 -5.344 -1.411 -0.319 C02 TUE 2
TUE N02 N02 N 0 1 N N N N N N 116.372 243.669 358.176 -6.069 -2.487 -0.811 N02 TUE 3
TUE C03 C03 C 0 1 Y N N N N N 115.642 245.679 359.271 -5.951 -0.536 0.593 C03 TUE 4
TUE C04 C04 C 0 1 Y N N N N N 115.765 247.059 359.417 -5.252 0.524 1.085 C04 TUE 5
TUE C05 C05 C 0 1 Y N N N N N 116.726 247.725 358.657 -3.922 0.707 0.651 C05 TUE 6
TUE C06 C06 C 0 1 Y N N N N N 116.914 249.099 358.756 -3.145 1.777 1.117 C06 TUE 7
TUE C07 C07 C 0 1 Y N N N N N 117.891 249.724 357.980 -1.864 1.922 0.677 C07 TUE 8
TUE C08 C08 C 0 1 Y N N N N N 118.684 248.987 357.102 -1.315 1.020 -0.231 C08 TUE 9
TUE C09 C09 C 0 1 Y N N N N N 118.504 247.622 357.025 -2.042 -0.030 -0.704 C09 TUE 10
TUE C10 C10 C 0 1 Y N N N N N 117.530 246.998 357.783 -3.366 -0.212 -0.272 C10 TUE 11
TUE C11 C11 C 0 1 N N N N N N 119.757 249.636 356.251 0.105 1.210 -0.698 C11 TUE 12
TUE O12 O12 O 0 1 N N N N N N 120.650 250.298 357.133 0.992 0.507 0.176 O12 TUE 13
TUE N21 N21 N 0 1 Y N N N N N 122.526 253.390 357.243 4.056 1.372 -1.478 N21 TUE 14
TUE C22 C22 C 0 1 Y N N N N N 121.690 252.399 357.585 2.770 1.302 -1.200 C22 TUE 15
TUE C23 C23 C 0 1 Y N N N N N 121.495 251.301 356.743 2.319 0.576 -0.107 C23 TUE 16
TUE C24 C24 C 0 1 Y N N N N N 122.180 251.220 355.538 3.246 -0.080 0.696 C24 TUE 17
TUE C25 C25 C 0 1 Y N N N N N 123.036 252.264 355.202 4.589 0.019 0.368 C25 TUE 18
TUE C26 C26 C 0 1 Y N N N N N 123.196 253.339 356.081 4.961 0.761 -0.737 C26 TUE 19
TUE C27 C27 C 0 1 N N N N N N 123.803 252.221 353.899 5.632 -0.673 1.207 C27 TUE 20
TUE N28 N28 N 0 1 N N N N N N 124.797 251.160 353.996 5.860 -2.023 0.687 N28 TUE 21
TUE C29 C29 C 0 1 N N N N N N 125.608 251.143 354.964 6.998 -2.334 0.192 C29 TUE 22
TUE HN02 HN02 H 0 0 N N N N N N 117.054 243.378 357.505 -5.660 -3.099 -1.443 HN02 TUE 23
TUE HN0A HN0A H 0 0 N N N N N N 116.537 243.200 359.043 -6.985 -2.626 -0.524 HN0A TUE 24
TUE H03 H03 H 0 1 N N N N N N 114.917 245.134 359.857 -6.971 -0.703 0.906 H03 TUE 25
TUE H04 H04 H 0 1 N N N N N N 115.131 247.601 360.103 -5.704 1.208 1.788 H04 TUE 26
TUE H06 H06 H 0 1 N N N N N N 116.305 249.681 359.432 -3.560 2.484 1.821 H06 TUE 27
TUE H07 H07 H 0 1 N N N N N N 118.034 250.791 358.061 -1.266 2.747 1.037 H07 TUE 28
TUE H09 H09 H 0 1 N N N N N N 119.129 247.036 356.367 -1.601 -0.720 -1.408 H09 TUE 29
TUE H11 H11 H 0 1 N N N N N N 120.296 248.869 355.675 0.210 0.821 -1.711 H11 TUE 30
TUE H11A H11A H 0 0 N N N N N N 119.302 250.362 355.560 0.352 2.271 -0.689 H11A TUE 31
TUE H22 H22 H 0 1 N N N N N N 121.160 252.450 358.525 2.058 1.816 -1.830 H22 TUE 32
TUE H24 H24 H 0 1 N N N N N N 122.052 250.372 354.881 2.928 -0.653 1.554 H24 TUE 33
TUE H26 H26 H 0 1 N N N N N N 123.870 254.142 355.821 6.005 0.842 -0.998 H26 TUE 34
TUE H27 H27 H 0 1 N N N N N N 123.114 252.012 353.067 6.563 -0.107 1.170 H27 TUE 35
TUE H27A H27A H 0 0 N N N N N N 124.303 253.186 353.728 5.286 -0.735 2.239 H27A TUE 36
TUE H29 H29 H 0 1 N N N N N N 125.564 251.914 355.719 7.791 -1.601 0.157 H29 TUE 37
TUE H29A H29A H 0 0 N N N N N N 126.345 250.357 355.037 7.166 -3.330 -0.192 H29A TUE 38
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
TUE N01 C02 DOUB Y N 1
TUE N01 C10 SING Y N 2
TUE C02 N02 SING N N 3
TUE C02 C03 SING Y N 4
TUE C03 C04 DOUB Y N 5
TUE C04 C05 SING Y N 6
TUE C05 C06 DOUB Y N 7
TUE C05 C10 SING Y N 8
TUE C06 C07 SING Y N 9
TUE C07 C08 DOUB Y N 10
TUE C08 C09 SING Y N 11
TUE C08 C11 SING N N 12
TUE C09 C10 DOUB Y N 13
TUE C11 O12 SING N N 14
TUE O12 C23 SING N N 15
TUE N21 C22 DOUB Y N 16
TUE N21 C26 SING Y N 17
TUE C22 C23 SING Y N 18
TUE C23 C24 DOUB Y N 19
TUE C24 C25 SING Y N 20
TUE C25 C26 DOUB Y N 21
TUE C25 C27 SING N N 22
TUE C27 N28 SING N N 23
TUE N28 C29 DOUB N N 24
TUE N02 HN02 SING N N 25
TUE N02 HN0A SING N N 26
TUE C03 H03 SING N N 27
TUE C04 H04 SING N N 28
TUE C06 H06 SING N N 29
TUE C07 H07 SING N N 30
TUE C09 H09 SING N N 31
TUE C11 H11 SING N N 32
TUE C11 H11A SING N N 33
TUE C22 H22 SING N N 34
TUE C24 H24 SING N N 35
TUE C26 H26 SING N N 36
TUE C27 H27 SING N N 37
TUE C27 H27A SING N N 38
TUE C29 H29 SING N N 39
TUE C29 H29A SING N N 40
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
TUE InChI InChI 1.03 InChI=1S/C17H16N4O/c1-19-8-13-6-15(10-20-9-13)22-11-12-2-3-14-4-5-17(18)21-16(14)7-12/h2-7,9-10H,1,8,11H2,(H2,18,21)
TUE InChIKey InChI 1.03 JWSPKIZRSASLMF-UHFFFAOYSA-N
TUE SMILES_CANONICAL CACTVS 3.385 Nc1ccc2ccc(COc3cncc(CN=C)c3)cc2n1
TUE SMILES CACTVS 3.385 Nc1ccc2ccc(COc3cncc(CN=C)c3)cc2n1
TUE SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 C=NCc1cc(cnc1)OCc2ccc3ccc(nc3c2)N
TUE SMILES "OpenEye OEToolkits" 1.7.6 C=NCc1cc(cnc1)OCc2ccc3ccc(nc3c2)N
#
_pdbx_chem_comp_identifier.comp_id TUE
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 1.7.6
_pdbx_chem_comp_identifier.identifier 7-[[5-[(methylideneamino)methyl]pyridin-3-yl]oxymethyl]quinolin-2-amine
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
TUE 'Create component' 2015-08-21 EBI
TUE 'Initial release' 2015-10-28 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
TUE N01 N 14.272 1.736 1
TUE C02 C 15.571 2.486 2
TUE N02 N 16.870 1.736 3
TUE C03 C 15.571 3.986 4
TUE C04 C 14.272 4.736 5
TUE C05 C 12.973 3.986 6
TUE C06 C 11.632 4.788 7
TUE C07 C 10.273 4.017 8
TUE C08 C 10.273 2.455 9
TUE C09 C 11.632 1.684 10
TUE C10 C 12.973 2.486 11
TUE C11 C 8.977 1.700 12
TUE O12 O 7.675 2.445 13
TUE N21 N 3.780 1.680 14
TUE C22 C 5.077 2.435 15
TUE C23 C 6.379 1.690 16
TUE C24 C 6.384 0.190 17
TUE C25 C 5.088 -0.565 18
TUE C26 C 3.786 0.180 19
TUE C27 C 5.094 -2.065 20
TUE N28 N 3.798 -2.820 21
TUE C29 C 3.804 -4.320 22
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
TUE N01 C02 DOUBLE NONE 1
TUE N01 C10 SINGLE NONE 2
TUE C02 N02 SINGLE NONE 3
TUE C02 C03 SINGLE NONE 4
TUE C03 C04 DOUBLE NONE 5
TUE C04 C05 SINGLE NONE 6
TUE C05 C06 SINGLE NONE 7
TUE C05 C10 DOUBLE NONE 8
TUE C06 C07 DOUBLE NONE 9
TUE C07 C08 SINGLE NONE 10
TUE C08 C09 DOUBLE NONE 11
TUE C08 C11 SINGLE NONE 12
TUE C09 C10 SINGLE NONE 13
TUE C11 O12 SINGLE NONE 14
TUE O12 C23 SINGLE NONE 15
TUE N21 C22 DOUBLE NONE 16
TUE N21 C26 SINGLE NONE 17
TUE C22 C23 SINGLE NONE 18
TUE C23 C24 DOUBLE NONE 19
TUE C24 C25 SINGLE NONE 20
TUE C25 C26 DOUBLE NONE 21
TUE C25 C27 SINGLE NONE 22
TUE C27 N28 SINGLE NONE 23
TUE N28 C29 DOUBLE NONE 24
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
TUE MurckoScaffold S1 scaffold c1cncc(OCc2ccc3cccnc3c2)c1 InChI=1S/C15H12N2O/c1-3-13-6-5-12(9-15(13)17-8-1)11-18-14-4-2-7-16-10-14/h1-10H,11H2 YRMOZLREGHQXPD-UHFFFAOYSA-N
TUE phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
TUE pyridine F2 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
TUE quinoline F3 fragment c1ccc2ncccc2c1 InChI=1S/C9H7N/c1-2-6-9-8(4-1)5-3-7-10-9/h1-7H SMWDFEZZVXVKRB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
TUE N01 S1 1
TUE C02 S1 1
TUE C03 S1 1
TUE C04 S1 1
TUE C05 S1 1
TUE C06 S1 1
TUE C07 S1 1
TUE C08 S1 1
TUE C09 S1 1
TUE C10 S1 1
TUE C11 S1 1
TUE O12 S1 1
TUE N21 S1 1
TUE C22 S1 1
TUE C23 S1 1
TUE C24 S1 1
TUE C25 S1 1
TUE C26 S1 1
TUE C05 F1 1
TUE C06 F1 1
TUE C07 F1 1
TUE C08 F1 1
TUE C09 F1 1
TUE C10 F1 1
TUE C02 F2 1
TUE C03 F2 1
TUE C04 F2 1
TUE C05 F2 1
TUE C10 F2 1
TUE N01 F2 1
TUE C22 F2 2
TUE C23 F2 2
TUE C24 F2 2
TUE C25 F2 2
TUE C26 F2 2
TUE N21 F2 2
TUE C07 F3 1
TUE C06 F3 1
TUE C05 F3 1
TUE C10 F3 1
TUE C09 F3 1
TUE C08 F3 1
TUE N01 F3 1
TUE C02 F3 1
TUE C03 F3 1
TUE C04 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id TUE
_pdbe_chem_comp_rdkit_properties.exactmw 292.132
_pdbe_chem_comp_rdkit_properties.amw 292.342
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 22
_pdbe_chem_comp_rdkit_properties.NumAtoms 38
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 5
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.118
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 150.649
_pdbe_chem_comp_rdkit_properties.tpsa 73.390
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.611
_pdbe_chem_comp_rdkit_properties.CrippenMR 83.805
_pdbe_chem_comp_rdkit_properties.chi0v 10.697
_pdbe_chem_comp_rdkit_properties.chi1v 5.723
_pdbe_chem_comp_rdkit_properties.chi2v 2.296
_pdbe_chem_comp_rdkit_properties.chi3v 2.296
_pdbe_chem_comp_rdkit_properties.chi4v 1.437
_pdbe_chem_comp_rdkit_properties.chi0n 26.697
_pdbe_chem_comp_rdkit_properties.chi1n 13.618
_pdbe_chem_comp_rdkit_properties.chi2n 2.296
_pdbe_chem_comp_rdkit_properties.chi3n 2.296
_pdbe_chem_comp_rdkit_properties.chi4n 1.437
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.950
_pdbe_chem_comp_rdkit_properties.kappa1 4.521
_pdbe_chem_comp_rdkit_properties.kappa2 6.218
_pdbe_chem_comp_rdkit_properties.kappa3 3.200
_pdbe_chem_comp_rdkit_properties.Phi 1.278
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
TUE UniChem ZINC ZINC000263620628
TUE UniChem PubChem 137350063
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
TUE N01 -4.305 1.247 0.531 ETKDGv3 1
TUE C02 -5.597 1.091 0.599 ETKDGv3 2
TUE N02 -6.409 2.118 1.167 ETKDGv3 3
TUE C03 -6.218 -0.152 0.086 ETKDGv3 4
TUE C04 -5.443 -1.105 -0.443 ETKDGv3 5
TUE C05 -3.980 -0.907 -0.510 ETKDGv3 6
TUE C06 -3.097 -1.945 -1.085 ETKDGv3 7
TUE C07 -1.774 -1.745 -1.139 ETKDGv3 8
TUE C08 -1.185 -0.480 -0.631 ETKDGv3 9
TUE C09 -1.988 0.454 -0.089 ETKDGv3 10
TUE C10 -3.449 0.238 -0.033 ETKDGv3 11
TUE C11 0.302 -0.287 -0.653 ETKDGv3 12
TUE O12 0.851 -0.731 0.585 ETKDGv3 13
TUE N21 3.884 -1.175 2.588 ETKDGv3 14
TUE C22 2.630 -1.193 2.241 ETKDGv3 15
TUE C23 2.215 -0.700 0.912 ETKDGv3 16
TUE C24 3.160 -0.241 0.071 ETKDGv3 17
TUE C25 4.584 -0.238 0.481 ETKDGv3 18
TUE C26 4.907 -0.685 1.705 ETKDGv3 19
TUE C27 5.632 0.309 -0.450 ETKDGv3 20
TUE N28 5.601 1.755 -0.457 ETKDGv3 21
TUE C29 6.019 2.460 0.535 ETKDGv3 22
TUE HN02 -7.445 2.005 1.228 ETKDGv3 23
TUE HN0A -5.974 2.996 1.530 ETKDGv3 24
TUE H03 -7.290 -0.290 0.138 ETKDGv3 25
TUE H04 -5.889 -2.017 -0.819 ETKDGv3 26
TUE H06 -3.517 -2.870 -1.460 ETKDGv3 27
TUE H07 -1.134 -2.512 -1.556 ETKDGv3 28
TUE H09 -1.573 1.371 0.312 ETKDGv3 29
TUE H11 0.743 -0.872 -1.490 ETKDGv3 30
TUE H11A 0.545 0.787 -0.811 ETKDGv3 31
TUE H22 1.889 -1.569 2.933 ETKDGv3 32
TUE H24 2.901 0.133 -0.911 ETKDGv3 33
TUE H26 5.935 -0.679 2.043 ETKDGv3 34
TUE H27 6.650 -0.051 -0.177 ETKDGv3 35
TUE H27A 5.424 -0.054 -1.479 ETKDGv3 36
TUE H29 6.420 1.991 1.429 ETKDGv3 37
TUE H29A 5.972 3.542 0.482 ETKDGv3 38
#