data_TRS
#
_chem_comp.id TRS
_chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C4 H12 N O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "TRIS BUFFER"
_chem_comp.pdbx_formal_charge 1
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces TMN
_chem_comp.formula_weight 122.143
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code TRS
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1C9O
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
TRS C C C 0 1 N N N N N N 63.354 58.802 2.996 0.013 -0.296 0.014 C TRS 1
TRS C1 C1 C 0 1 N N N N N N 62.918 60.270 2.871 -0.042 0.986 0.848 C1 TRS 2
TRS C2 C2 C 0 1 N N N N N N 63.074 58.126 1.645 1.263 -0.276 -0.869 C2 TRS 3
TRS C3 C3 C 0 1 N N N N N N 62.585 57.996 4.079 -1.233 -0.384 -0.869 C3 TRS 4
TRS N N N 1 1 N N N N N N 64.761 58.939 3.398 0.064 -1.460 0.908 N TRS 5
TRS O1 O1 O 0 1 N N N N N N 61.753 60.364 2.097 -0.091 2.118 -0.022 O1 TRS 6
TRS O2 O2 O 0 1 N N N N N N 62.822 59.013 0.579 2.429 -0.311 -0.044 O2 TRS 7
TRS O3 O3 O 0 1 N N N N N N 63.365 57.496 5.176 -2.400 -0.403 -0.044 O3 TRS 8
TRS H11 1H1 H 0 1 N N N N N N 62.796 60.755 3.867 -0.932 0.972 1.477 H11 TRS 9
TRS H12 2H1 H 0 1 N N N N N N 63.735 60.915 2.473 0.846 1.049 1.477 H12 TRS 10
TRS H21 1H2 H 0 1 N N N N N N 63.906 57.432 1.381 1.257 -1.145 -1.527 H21 TRS 11
TRS H22 2H2 H 0 1 N N N N N N 62.237 57.395 1.745 1.269 0.633 -1.469 H22 TRS 12
TRS H31 1H3 H 0 1 N N N N N N 61.735 58.604 4.468 -1.271 0.480 -1.532 H31 TRS 13
TRS H32 2H3 H 0 1 N N N N N N 62.029 57.156 3.599 -1.194 -1.297 -1.463 H32 TRS 14
TRS HN1 1HN H 0 1 N N N N N N 65.050 57.964 3.481 -0.760 -1.473 1.490 HN1 TRS 15
TRS HN2 2HN H 0 1 N N N N N N 65.335 59.510 2.777 0.886 -1.402 1.490 HN2 TRS 16
TRS HN3 3HN H 0 1 N N N N N N 64.920 59.510 4.227 0.100 -2.305 0.358 HN3 TRS 17
TRS HO1 HO1 H 0 1 N N N N N N 61.483 61.271 2.019 -0.125 2.903 0.542 HO1 TRS 18
TRS HO2 HO2 H 0 1 N N N N N N 62.648 58.595 -0.256 3.192 -0.297 -0.638 HO2 TRS 19
TRS HO3 HO3 H 0 1 N N N N N N 62.894 57.003 5.838 -3.161 -0.459 -0.638 HO3 TRS 20
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
TRS C C1 SING N N 1
TRS C C2 SING N N 2
TRS C C3 SING N N 3
TRS C N SING N N 4
TRS C1 O1 SING N N 5
TRS C1 H11 SING N N 6
TRS C1 H12 SING N N 7
TRS C2 O2 SING N N 8
TRS C2 H21 SING N N 9
TRS C2 H22 SING N N 10
TRS C3 O3 SING N N 11
TRS C3 H31 SING N N 12
TRS C3 H32 SING N N 13
TRS N HN1 SING N N 14
TRS N HN2 SING N N 15
TRS N HN3 SING N N 16
TRS O1 HO1 SING N N 17
TRS O2 HO2 SING N N 18
TRS O3 HO3 SING N N 19
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
TRS SMILES ACDLabs 10.04 OCC([NH3+])(CO)CO
TRS SMILES_CANONICAL CACTVS 3.341 "[NH3+]C(CO)(CO)CO"
TRS SMILES CACTVS 3.341 "[NH3+]C(CO)(CO)CO"
TRS SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 C(C(CO)(CO)[NH3+])O
TRS SMILES "OpenEye OEToolkits" 1.5.0 C(C(CO)(CO)[NH3+])O
TRS InChI InChI 1.03 InChI=1S/C4H11NO3/c5-4(1-6,2-7)3-8/h6-8H,1-3,5H2/p+1
TRS InChIKey InChI 1.03 LENZDBCJOHFCAS-UHFFFAOYSA-O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
TRS "SYSTEMATIC NAME" ACDLabs 10.04 1,3-dihydroxy-2-(hydroxymethyl)propan-2-aminium
TRS "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[1,3-dihydroxy-2-(hydroxymethyl)propan-2-yl]azanium"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
TRS 'Create component' 1999-07-08 EBI
TRS 'Modify descriptor' 2011-06-04 RCSB
TRS 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id TRS
_pdbx_chem_comp_synonyms.name "TRIS BUFFER"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id TRS
_pdbe_chem_comp_synonyms.name 'TRIS BUFFER'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
TRS C C -0.000 -0.462 1
TRS C1 C 0.750 0.837 2
TRS C2 C -1.299 -1.212 3
TRS C3 C 1.299 -1.212 4
TRS N N -0.750 0.837 5
TRS O1 O -0.000 2.136 6
TRS O2 O -2.598 -0.462 7
TRS O3 O 2.598 -0.462 8
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
TRS C C1 SINGLE NONE 1
TRS C C2 SINGLE NONE 2
TRS C C3 SINGLE NONE 3
TRS C N SINGLE NONE 4
TRS C1 O1 SINGLE NONE 5
TRS C2 O2 SINGLE NONE 6
TRS C3 O3 SINGLE NONE 7
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id TRS
_pdbe_chem_comp_rdkit_properties.exactmw 122.081
_pdbe_chem_comp_rdkit_properties.amw 122.144
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 6
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 8
_pdbe_chem_comp_rdkit_properties.NumAtoms 20
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 64.850
_pdbe_chem_comp_rdkit_properties.tpsa 88.330
_pdbe_chem_comp_rdkit_properties.CrippenClogP -3.056
_pdbe_chem_comp_rdkit_properties.CrippenMR 26.877
_pdbe_chem_comp_rdkit_properties.chi0v 3.672
_pdbe_chem_comp_rdkit_properties.chi1v 1.586
_pdbe_chem_comp_rdkit_properties.chi2v 0.443
_pdbe_chem_comp_rdkit_properties.chi3v 0.443
_pdbe_chem_comp_rdkit_properties.chi4v 0.063
_pdbe_chem_comp_rdkit_properties.chi0n 15.672
_pdbe_chem_comp_rdkit_properties.chi1n 7.152
_pdbe_chem_comp_rdkit_properties.chi2n 0.443
_pdbe_chem_comp_rdkit_properties.chi3n 0.443
_pdbe_chem_comp_rdkit_properties.chi4n 0.063
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.160
_pdbe_chem_comp_rdkit_properties.kappa1 1.033
_pdbe_chem_comp_rdkit_properties.kappa2 2.985
_pdbe_chem_comp_rdkit_properties.kappa3 1.751
_pdbe_chem_comp_rdkit_properties.Phi 0.386
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
TRS UniChem PDBe TRS
TRS UniChem ChEBI 46097
TRS UniChem SureChEMBL SCHEMBL7091147
TRS UniChem BRENDA 60566
TRS UniChem Nikkaji J1.072.106G
TRS UniChem 'PubChem TPHARMA' 123048854
TRS UniChem PubChem 3777159
TRS UniChem PubChem 88088752
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
TRS C -0.077 -0.164 0.144 ETKDGv3 1
TRS C1 1.299 0.423 -0.271 ETKDGv3 2
TRS C2 -0.361 -1.429 -0.710 ETKDGv3 3
TRS C3 -1.213 0.870 -0.098 ETKDGv3 4
TRS N -0.049 -0.553 1.567 ETKDGv3 5
TRS O1 1.675 1.478 0.573 ETKDGv3 6
TRS O2 -0.388 -1.117 -2.077 ETKDGv3 7
TRS O3 -1.076 1.992 0.735 ETKDGv3 8
TRS H11 2.075 -0.374 -0.218 ETKDGv3 9
TRS H12 1.255 0.790 -1.321 ETKDGv3 10
TRS H21 -1.339 -1.871 -0.413 ETKDGv3 11
TRS H22 0.426 -2.194 -0.521 ETKDGv3 12
TRS H31 -1.243 1.175 -1.171 ETKDGv3 13
TRS H32 -2.194 0.398 0.127 ETKDGv3 14
TRS HN1 0.129 0.273 2.182 ETKDGv3 15
TRS HN2 -0.964 -0.977 1.848 ETKDGv3 16
TRS HN3 0.707 -1.257 1.738 ETKDGv3 17
TRS HO1 2.553 1.800 0.240 ETKDGv3 18
TRS HO2 -0.573 -1.969 -2.551 ETKDGv3 19
TRS HO3 -0.641 2.704 0.197 ETKDGv3 20
#