data_TBU
#
_chem_comp.id TBU
_chem_comp.name "TERTIARY-BUTYL ALCOHOL"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C4 H10 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms 2-METHYL-2-PROPANOL
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 74.122
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code TBU
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1RUV
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
TBU O O O 0 1 N N N N N N 26.478 6.056 24.760 0.665 0.000 -1.256 O TBU 1
TBU C C C 0 1 N N N N N N 26.651 7.120 25.693 -0.014 -0.000 0.001 C TBU 2
TBU C1 C1 C 0 1 N N N N N N 27.838 6.811 26.605 0.378 1.249 0.793 C1 TBU 3
TBU C2 C2 C 0 1 N N N N N N 25.410 7.251 26.570 -1.526 -0.000 -0.235 C2 TBU 4
TBU C3 C3 C 0 1 N N N N N N 26.909 8.411 24.903 0.378 -1.249 0.793 C3 TBU 5
TBU HO HO H 0 1 N N N N N N 25.740 6.248 24.193 1.629 0.000 -1.182 HO TBU 6
TBU H11 H11 H 0 1 N N N N N N 27.971 7.632 27.325 0.098 2.139 0.229 H11 TBU 7
TBU H12 H12 H 0 1 N N N N N N 27.648 5.874 27.149 -0.140 1.249 1.752 H12 TBU 8
TBU H13 H13 H 0 1 N N N N N N 28.749 6.704 25.998 1.455 1.249 0.962 H13 TBU 9
TBU H21 H21 H 0 1 N N N N N N 25.552 8.074 27.286 -1.805 -0.890 -0.799 H21 TBU 10
TBU H22 H22 H 0 1 N N N N N N 24.535 7.462 25.938 -2.044 -0.000 0.724 H22 TBU 11
TBU H23 H23 H 0 1 N N N N N N 25.248 6.311 27.118 -1.805 0.890 -0.799 H23 TBU 12
TBU H31 H31 H 0 1 N N N N N N 27.046 9.249 25.603 1.455 -1.249 0.962 H31 TBU 13
TBU H32 H32 H 0 1 N N N N N N 27.816 8.292 24.292 -0.140 -1.249 1.752 H32 TBU 14
TBU H33 H33 H 0 1 N N N N N N 26.050 8.618 24.248 0.098 -2.139 0.229 H33 TBU 15
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
TBU O C SING N N 1
TBU O HO SING N N 2
TBU C C1 SING N N 3
TBU C C2 SING N N 4
TBU C C3 SING N N 5
TBU C1 H11 SING N N 6
TBU C1 H12 SING N N 7
TBU C1 H13 SING N N 8
TBU C2 H21 SING N N 9
TBU C2 H22 SING N N 10
TBU C2 H23 SING N N 11
TBU C3 H31 SING N N 12
TBU C3 H32 SING N N 13
TBU C3 H33 SING N N 14
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
TBU SMILES ACDLabs 11.02 OC(C)(C)C
TBU SMILES_CANONICAL CACTVS 3.352 CC(C)(C)O
TBU SMILES CACTVS 3.352 CC(C)(C)O
TBU SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 CC(C)(C)O
TBU SMILES "OpenEye OEToolkits" 1.7.0 CC(C)(C)O
TBU InChI InChI 1.03 InChI=1S/C4H10O/c1-4(2,3)5/h5H,1-3H3
TBU InChIKey InChI 1.03 DKGAVHZHDRPRBM-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
TBU "SYSTEMATIC NAME" ACDLabs 11.02 2-methylpropan-2-ol
TBU "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 2-methylpropan-2-ol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
TBU 'Create component' 1999-07-08 PDBJ
TBU 'Modify descriptor' 2011-06-04 RCSB
TBU 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id TBU
_pdbx_chem_comp_synonyms.name 2-METHYL-2-PROPANOL
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_details.comp_id TBU
_pdbe_chem_comp_drugbank_details.drugbank_id DB03900
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name tert-butanol
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number 75-65-0
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
TBU 2-METHYL-2-PROPANOL wwPDB ?
TBU 1,1-dimethylethanol DrugBank ?
TBU t-butanol DrugBank ?
TBU 't-butyl alchohol' DrugBank ?
TBU 't-Butyl alcohol' DrugBank ?
TBU t-Butylalkohol DrugBank ?
TBU tert-butanol DrugBank ?
TBU 'tert-butyl alcohol' DrugBank ?
TBU 'tertiary-butyl alcohol' DrugBank ?
TBU trimethylcarbinol DrugBank ?
TBU trimethylmethanol DrugBank ?
#
_pdbe_chem_comp_drugbank_classification.comp_id TBU
_pdbe_chem_comp_drugbank_classification.drugbank_id DB03900
_pdbe_chem_comp_drugbank_classification.parent 'Tertiary alcohols'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Organooxygen compounds'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic oxygen compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as tertiary alcohols. These are compounds in which a hydroxy group, -OH, is attached to a saturated carbon atom R3COH (R not H ).'
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
TBU DB03900 'Ribonuclease pancreatic' Humans P07998 unknown 1
TBU DB03900 'Triosephosphate isomerase' Humans P60174 unknown 2
TBU DB03900 'Methionine aminopeptidase 2' Humans P50579 unknown 3
TBU DB03900 'Biphenyl-2,3-diol 1,2-dioxygenase' 'Burkholderia xenovorans (strain LB400)' P47228 unknown 4
TBU DB03900 Calmodulin Humans P0DP23 unknown 5
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
TBU O O 5.598 0.750 1
TBU C C 4.299 0.000 2
TBU C1 C 3.000 -0.750 3
TBU C2 C 3.549 1.299 4
TBU C3 C 5.049 -1.299 5
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
TBU O C SINGLE NONE 1
TBU C C1 SINGLE NONE 2
TBU C C2 SINGLE NONE 3
TBU C C3 SINGLE NONE 4
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id TBU
_pdbe_chem_comp_rdkit_properties.exactmw 74.073
_pdbe_chem_comp_rdkit_properties.amw 74.123
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 1
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 0
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 1
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 5
_pdbe_chem_comp_rdkit_properties.NumAtoms 15
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 1
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 46.765
_pdbe_chem_comp_rdkit_properties.tpsa 20.230
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.777
_pdbe_chem_comp_rdkit_properties.CrippenMR 21.972
_pdbe_chem_comp_rdkit_properties.chi0v 2.408
_pdbe_chem_comp_rdkit_properties.chi1v 0.954
_pdbe_chem_comp_rdkit_properties.chi2v 0
_pdbe_chem_comp_rdkit_properties.chi3v 0
_pdbe_chem_comp_rdkit_properties.chi4v 0
_pdbe_chem_comp_rdkit_properties.chi0n 12.408
_pdbe_chem_comp_rdkit_properties.chi1n 5.862
_pdbe_chem_comp_rdkit_properties.chi2n 0
_pdbe_chem_comp_rdkit_properties.chi3n 0
_pdbe_chem_comp_rdkit_properties.chi4n 0
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.040
_pdbe_chem_comp_rdkit_properties.kappa1 0.399
_pdbe_chem_comp_rdkit_properties.kappa2 0.977
_pdbe_chem_comp_rdkit_properties.kappa3 9507.960
_pdbe_chem_comp_rdkit_properties.Phi 0.078
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
TBU UniChem ChEMBL CHEMBL16502
TBU UniChem DrugBank DB03900
TBU UniChem PDBe TBU
TBU UniChem ChEBI 45895
TBU UniChem ZINC ZINC000001680021
TBU UniChem fdasrs MD83SFE959
TBU UniChem HMDB HMDB0031456
TBU UniChem NMRShiftDB 8112
TBU UniChem 'EPA CompTox Dashboard' DTXSID8020204
TBU UniChem MetaboLights MTBLC45895
TBU UniChem BRENDA 10488
TBU UniChem BRENDA 109638
TBU UniChem BRENDA 16430
TBU UniChem BRENDA 174398
TBU UniChem BRENDA 21897
TBU UniChem BRENDA 2231
TBU UniChem BRENDA 35077
TBU UniChem BRENDA 91116
TBU UniChem Rhea 45895
TBU UniChem ChemicalBook CB5206388
TBU UniChem rxnorm 'TERT-BUTYL ALCOHOL'
TBU UniChem 'Probes And Drugs' PD006670
TBU UniChem Nikkaji J1.459A
TBU UniChem eMolecules 487286
TBU UniChem SureChEMBL SCHEMBL282
TBU UniChem 'PubChem TPHARMA' 15146291
TBU UniChem PubChem 6386
TBU UniChem Mcule MCULE-2451492095
TBU UniChem ACTor 75-65-0
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
TBU O 0.047 0.077 -1.679 ETKDGv3 1
TBU C -0.024 -0.015 -0.276 ETKDGv3 2
TBU C1 -1.142 -1.005 0.081 ETKDGv3 3
TBU C2 1.315 -0.531 0.282 ETKDGv3 4
TBU C3 -0.352 1.365 0.322 ETKDGv3 5
TBU HO 0.771 0.718 -1.908 ETKDGv3 6
TBU H11 -2.114 -0.653 -0.326 ETKDGv3 7
TBU H12 -1.237 -1.113 1.183 ETKDGv3 8
TBU H13 -0.926 -2.005 -0.355 ETKDGv3 9
TBU H21 1.262 -0.648 1.386 ETKDGv3 10
TBU H22 1.567 -1.515 -0.168 ETKDGv3 11
TBU H23 2.136 0.179 0.045 ETKDGv3 12
TBU H31 -1.305 1.751 -0.099 ETKDGv3 13
TBU H32 -0.452 1.301 1.427 ETKDGv3 14
TBU H33 0.453 2.094 0.085 ETKDGv3 15
#