data_TAM
#
_chem_comp.id TAM
_chem_comp.name TRIS(HYDROXYETHYL)AMINOMETHANE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C7 H17 N O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 163.215
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code TAM
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag Y
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2ULL
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
TAM C C C 0 1 N N N N N N 12.975 33.515 18.638 1.809 -0.153 -1.219 C TAM 1
TAM C1 C1 C 0 1 N N N N N N 12.880 34.978 18.125 1.064 0.259 0.082 C1 TAM 2
TAM C2 C2 C 0 1 N N N N N N 14.423 33.156 18.553 1.562 -1.670 -1.446 C2 TAM 3
TAM C3 C3 C 0 1 N N N N N N 12.546 32.814 19.907 1.393 0.705 -2.440 C3 TAM 4
TAM C4 C4 C 0 1 N N N N N N 12.005 36.123 18.536 1.124 1.739 0.456 C4 TAM 5
TAM C5 C5 C 0 1 N N N N N N 14.828 33.647 17.311 2.283 -2.292 -2.641 C5 TAM 6
TAM C6 C6 C 0 1 N N N N N N 11.162 33.059 20.051 -0.073 0.587 -2.848 C6 TAM 7
TAM N N N 0 1 N N N N N N 12.332 32.906 17.546 3.258 0.041 -1.027 N TAM 8
TAM O4 O4 O 0 1 N N N N N N ? ? ? 0.366 1.934 1.646 O4 TAM 9
TAM O5 O5 O 0 1 N N N N N N ? ? ? 1.967 -3.679 -2.687 O5 TAM 10
TAM O6 O6 O 0 1 N N N N N N ? ? ? -0.304 1.448 -3.958 O6 TAM 11
TAM H11 1H1 H 0 1 N N N N N N 12.714 34.879 17.027 1.455 -0.322 0.930 H11 TAM 12
TAM H12 2H1 H 0 1 N N N N N N 13.919 35.374 18.214 0.009 -0.038 0.017 H12 TAM 13
TAM H21 1H2 H 0 1 N N N N N N 14.634 32.072 18.706 0.486 -1.865 -1.550 H21 TAM 14
TAM H22 2H2 H 0 1 N N N N N N 15.035 33.522 19.410 1.852 -2.230 -0.544 H22 TAM 15
TAM H31 1H3 H 0 1 N N N N N N 13.143 33.113 20.800 1.615 1.765 -2.256 H31 TAM 16
TAM H32 2H3 H 0 1 N N N N N N 12.807 31.730 19.923 2.016 0.457 -3.311 H32 TAM 17
TAM H41 1H4 H 0 1 N N N N N N 11.922 37.224 18.379 0.689 2.368 -0.324 H41 TAM 18
TAM H42 2H4 H 0 1 N N N N N N 11.772 36.727 19.444 2.150 2.063 0.652 H42 TAM 19
TAM H51 1H5 H 0 1 N N N N N N 15.888 33.950 17.141 3.368 -2.194 -2.552 H51 TAM 20
TAM H52 2H5 H 0 1 N N N N N N 14.496 34.654 16.966 1.957 -1.843 -3.583 H52 TAM 21
TAM H61 1H6 H 0 1 N N N N N N 10.764 34.042 19.706 -0.740 0.894 -2.039 H61 TAM 22
TAM H62 2H6 H 0 1 N N N N N N 10.760 33.210 21.080 -0.323 -0.432 -3.155 H62 TAM 23
TAM HN1 1HN H 0 1 N N N N N N 12.712 33.098 16.619 3.573 0.961 -0.837 HN1 TAM 24
TAM HN2 2HN H 0 1 N N N N N N 12.394 31.945 17.883 3.856 -0.702 -1.296 HN2 TAM 25
TAM HO4 HO4 H 0 1 N N N N N N -0.555 0.726 0.261 -0.107 2.774 1.539 HO4 TAM 26
TAM HO5 HO5 H 0 1 N N N N N N 0.276 0.334 -0.845 2.268 -4.005 -3.550 HO5 TAM 27
TAM HO6 HO6 H 0 1 N N N N N N -0.931 0.165 0.097 0.310 1.172 -4.657 HO6 TAM 28
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
TAM C C1 SING N N 1
TAM C C2 SING N N 2
TAM C C3 SING N N 3
TAM C N SING N N 4
TAM C1 C4 SING N N 5
TAM C1 H11 SING N N 6
TAM C1 H12 SING N N 7
TAM C2 C5 SING N N 8
TAM C2 H21 SING N N 9
TAM C2 H22 SING N N 10
TAM C3 C6 SING N N 11
TAM C3 H31 SING N N 12
TAM C3 H32 SING N N 13
TAM C4 O4 SING N N 14
TAM C4 H41 SING N N 15
TAM C4 H42 SING N N 16
TAM C5 O5 SING N N 17
TAM C5 H51 SING N N 18
TAM C5 H52 SING N N 19
TAM C6 O6 SING N N 20
TAM C6 H61 SING N N 21
TAM C6 H62 SING N N 22
TAM N HN1 SING N N 23
TAM N HN2 SING N N 24
TAM O4 HO4 SING N N 25
TAM O5 HO5 SING N N 26
TAM O6 HO6 SING N N 27
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
TAM SMILES ACDLabs 10.04 OCCC(N)(CCO)CCO
TAM SMILES_CANONICAL CACTVS 3.341 NC(CCO)(CCO)CCO
TAM SMILES CACTVS 3.341 NC(CCO)(CCO)CCO
TAM SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 C(CO)C(CCO)(CCO)N
TAM SMILES "OpenEye OEToolkits" 1.5.0 C(CO)C(CCO)(CCO)N
TAM InChI InChI 1.03 InChI=1S/C7H17NO3/c8-7(1-4-9,2-5-10)3-6-11/h9-11H,1-6,8H2
TAM InChIKey InChI 1.03 GKODZWOPPOTFGA-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
TAM "SYSTEMATIC NAME" ACDLabs 10.04 3-amino-3-(2-hydroxyethyl)pentane-1,5-diol
TAM "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 3-amino-3-(2-hydroxyethyl)pentane-1,5-diol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
TAM 'Create component' 1999-07-08 PDBJ
TAM 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id TAM
_pdbe_chem_comp_drugbank_details.drugbank_id DB04237
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Tris(Hydroxyethyl)Aminomethane
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_synonyms.comp_id TAM
_pdbe_chem_comp_synonyms.name Tris(Hydroxyethyl)Aminomethane
_pdbe_chem_comp_synonyms.provenance DrugBank
_pdbe_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_classification.comp_id TAM
_pdbe_chem_comp_drugbank_classification.drugbank_id DB04237
_pdbe_chem_comp_drugbank_classification.parent 1,3-aminoalcohols
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Organonitrogen compounds'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic nitrogen compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as 1,3-aminoalcohols. These are organic compounds containing an alkyl chain with an amine group bound to the C1 atom and an alcohol group bound to the C3 atom.'
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
TAM DB04237 'Chlorocatechol 1,2-dioxygenase' 'Rhodococcus opacus' O67987 unknown 1
TAM DB04237 'Alpha-lytic protease' 'Lysobacter enzymogenes' P00778 unknown 2
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
TAM C C 5.104 0.000 1
TAM C1 C 6.404 0.750 2
TAM C2 C 4.354 1.299 3
TAM C3 C 5.854 -1.299 4
TAM C4 C 7.702 0.000 5
TAM C5 C 5.104 2.598 6
TAM C6 C 5.104 -2.598 7
TAM N N 3.805 -0.750 8
TAM O4 O 9.002 0.750 9
TAM O5 O 4.354 3.897 10
TAM O6 O 5.854 -3.897 11
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
TAM C C1 SINGLE NONE 1
TAM C C2 SINGLE NONE 2
TAM C C3 SINGLE NONE 3
TAM C N SINGLE NONE 4
TAM C1 C4 SINGLE NONE 5
TAM C2 C5 SINGLE NONE 6
TAM C3 C6 SINGLE NONE 7
TAM C4 O4 SINGLE NONE 8
TAM C5 O5 SINGLE NONE 9
TAM C6 O6 SINGLE NONE 10
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id TAM
_pdbe_chem_comp_rdkit_properties.exactmw 163.121
_pdbe_chem_comp_rdkit_properties.amw 163.217
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 10
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 11
_pdbe_chem_comp_rdkit_properties.NumAtoms 28
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 90.912
_pdbe_chem_comp_rdkit_properties.tpsa 86.710
_pdbe_chem_comp_rdkit_properties.CrippenClogP -1.169
_pdbe_chem_comp_rdkit_properties.CrippenMR 42.027
_pdbe_chem_comp_rdkit_properties.chi0v 5.172
_pdbe_chem_comp_rdkit_properties.chi1v 2.336
_pdbe_chem_comp_rdkit_properties.chi2v 0.696
_pdbe_chem_comp_rdkit_properties.chi3v 0.696
_pdbe_chem_comp_rdkit_properties.chi4v 0.315
_pdbe_chem_comp_rdkit_properties.chi0n 22.172
_pdbe_chem_comp_rdkit_properties.chi1n 10.455
_pdbe_chem_comp_rdkit_properties.chi2n 0.696
_pdbe_chem_comp_rdkit_properties.chi3n 0.696
_pdbe_chem_comp_rdkit_properties.chi4n 0.315
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.160
_pdbe_chem_comp_rdkit_properties.kappa1 1.457
_pdbe_chem_comp_rdkit_properties.kappa2 5.485
_pdbe_chem_comp_rdkit_properties.kappa3 4.314
_pdbe_chem_comp_rdkit_properties.Phi 0.727
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
TAM UniChem DrugBank DB04237
TAM UniChem SureChEMBL SCHEMBL148930
TAM UniChem 'PubChem TPHARMA' 16386019
TAM UniChem 'Probes And Drugs' PD006474
TAM UniChem 'EPA CompTox Dashboard' DTXSID10332268
TAM UniChem PubChem 448009
TAM UniChem Nikkaji J948.064A
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
TAM C -0.252 0.103 -0.328 ETKDGv3 1
TAM C1 0.935 0.898 -0.978 ETKDGv3 2
TAM C2 0.224 -1.193 0.407 ETKDGv3 3
TAM C3 -0.986 1.031 0.698 ETKDGv3 4
TAM C4 2.064 1.346 -0.033 ETKDGv3 5
TAM C5 0.989 -2.222 -0.449 ETKDGv3 6
TAM C6 -2.357 0.516 1.174 ETKDGv3 7
TAM N -1.203 -0.266 -1.391 ETKDGv3 8
TAM O4 2.881 0.263 0.314 ETKDGv3 9
TAM O5 0.128 -2.901 -1.323 ETKDGv3 10
TAM O6 -2.947 1.452 2.035 ETKDGv3 11
TAM H11 0.520 1.814 -1.454 ETKDGv3 12
TAM H12 1.383 0.319 -1.813 ETKDGv3 13
TAM H21 -0.651 -1.721 0.839 ETKDGv3 14
TAM H22 0.863 -0.914 1.271 ETKDGv3 15
TAM H31 -1.143 2.032 0.238 ETKDGv3 16
TAM H32 -0.355 1.182 1.599 ETKDGv3 17
TAM H41 2.682 2.102 -0.567 ETKDGv3 18
TAM H42 1.660 1.835 0.878 ETKDGv3 19
TAM H51 1.797 -1.745 -1.036 ETKDGv3 20
TAM H52 1.486 -2.955 0.227 ETKDGv3 21
TAM H61 -3.033 0.319 0.312 ETKDGv3 22
TAM H62 -2.236 -0.430 1.737 ETKDGv3 23
TAM HN1 -0.699 -0.726 -2.182 ETKDGv3 24
TAM HN2 -1.627 0.603 -1.794 ETKDGv3 25
TAM HO4 3.571 0.623 0.929 ETKDGv3 26
TAM HO5 -0.389 -3.545 -0.772 ETKDGv3 27
TAM HO6 -3.304 2.181 1.463 ETKDGv3 28
#