data_T05
#
_chem_comp.id T05
_chem_comp.name
"4-{[(3S)-3-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)piperidin-1-yl]sulfonyl}-2-(3-methylphenoxy)benzoic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H25 N3 O7 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2012-10-23
_chem_comp.pdbx_modified_date 2012-10-26
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 499.536
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code T05
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4HLC
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
T05 C4 C4 C 0 1 Y N N N N N 5.676 -1.904 50.466 -5.685 1.819 -0.483 C4 T05 1
T05 C13 C13 C 0 1 Y N N N N N 3.937 1.566 55.060 -1.096 -2.776 -1.049 C13 T05 2
T05 C3 C3 C 0 1 Y N N N N N 6.651 -1.773 49.504 -5.716 2.526 0.705 C3 T05 3
T05 C5 C5 C 0 1 Y N N N N N 5.588 -0.951 51.466 -5.105 0.566 -0.528 C5 T05 4
T05 C12 C12 C 0 1 Y N N N N N 2.967 2.278 54.400 -0.493 -1.665 -1.598 C12 T05 5
T05 C7 C7 C 0 1 Y N N N N N 7.451 0.242 50.521 -4.587 0.728 1.812 C7 T05 6
T05 C10 C10 C 0 1 Y N N N N N 4.292 2.213 52.385 -2.212 -0.255 -0.692 C10 T05 7
T05 C14 C14 C 0 1 Y N N N N N 5.078 1.153 54.401 -2.276 -2.637 -0.314 C14 T05 8
T05 C2 C2 C 0 1 Y N N N N N 7.537 -0.714 49.528 -5.168 1.980 1.851 C2 T05 9
T05 C6 C6 C 0 1 Y N N N N N 6.466 0.119 51.478 -4.549 0.019 0.620 C6 T05 10
T05 C9 C9 C 0 1 Y N N N N N 5.252 1.480 53.060 -2.836 -1.363 -0.137 C9 T05 11
T05 C11 C11 C 0 1 Y N N N N N 3.135 2.583 53.062 -1.049 -0.409 -1.421 C11 T05 12
T05 C28 C28 C 0 1 N N N N N N 1.112 -1.182 49.040 4.283 -1.049 0.854 C28 T05 13
T05 C29 C29 C 0 1 N N N N N N 1.515 -1.918 47.990 5.589 -1.384 0.929 C29 T05 14
T05 C30 C30 C 0 1 N N N N N N 1.354 -1.330 46.629 6.570 -0.397 0.670 C30 T05 15
T05 C33 C33 C 0 1 N N N N N N 0.423 0.694 47.677 4.872 1.162 0.287 C33 T05 16
T05 C15 C15 C 0 1 N N N N N N 6.067 0.397 55.186 -2.930 -3.821 0.271 C15 T05 17
T05 C23 C23 C 0 1 N N N N N N -1.279 0.888 52.176 0.725 2.063 1.393 C23 T05 18
T05 C24 C24 C 0 1 N N N N N N -0.837 0.029 50.991 2.212 1.704 1.454 C24 T05 19
T05 C22 C22 C 0 1 N N N N N N -0.056 1.528 52.811 0.386 2.581 -0.008 C22 T05 20
T05 C26 C26 C 0 1 N N N N N N 1.274 1.389 50.763 2.195 1.097 -0.968 C26 T05 21
T05 C25 C25 C 0 1 N N S N N N 0.080 0.824 50.054 2.513 0.596 0.444 C25 T05 22
T05 C1 C1 C 0 1 N N N N N N 8.585 -0.569 48.491 -5.204 2.753 3.144 C1 T05 23
T05 C35 C35 C 0 1 N N N N N N 2.118 -3.274 48.108 5.997 -2.791 1.284 C35 T05 24
T05 N32 N32 N 0 1 N N N N N N 0.811 -0.055 46.598 6.181 0.855 0.354 N32 T05 25
T05 N27 N27 N 0 1 N N N N N N 0.543 0.073 48.906 3.930 0.232 0.525 N27 T05 26
T05 N21 N21 N 0 1 N N N N N N 0.713 2.290 51.782 0.807 1.579 -0.997 N21 T05 27
T05 O31 O31 O 0 1 N N N N N N 1.674 -1.936 45.610 7.753 -0.675 0.731 O31 T05 28
T05 O34 O34 O 0 1 N N N N N N 0.004 1.836 47.545 4.536 2.294 -0.004 O34 T05 29
T05 O16 O16 O 0 1 N N N N N N 6.487 0.952 56.235 -2.389 -5.043 0.098 O16 T05 30
T05 O19 O19 O 0 1 N N N N N N 1.132 4.303 53.254 0.517 0.529 -3.211 O19 T05 31
T05 O20 O20 O 0 1 N N N N N N 2.444 4.099 51.083 -1.270 1.995 -2.263 O20 T05 32
T05 O17 O17 O 0 1 N N N N N N 6.390 -0.753 54.782 -3.956 -3.696 0.910 O17 T05 33
T05 O8 O8 O 0 1 N N N N N N 6.444 1.118 52.453 -3.978 -1.214 0.579 O8 T05 34
T05 S18 S18 S 0 1 N N N N N N 1.822 3.504 52.253 -0.263 1.003 -2.122 S18 T05 35
T05 H1 H1 H 0 1 N N N N N N 4.990 -2.738 50.441 -6.118 2.245 -1.376 H1 T05 36
T05 H2 H2 H 0 1 N N N N N N 3.807 1.326 56.105 -0.659 -3.754 -1.190 H2 T05 37
T05 H3 H3 H 0 1 N N N N N N 6.725 -2.510 48.718 -6.169 3.505 0.738 H3 T05 38
T05 H4 H4 H 0 1 N N N N N N 4.836 -1.042 52.235 -5.085 0.012 -1.455 H4 T05 39
T05 H5 H5 H 0 1 N N N N N N 2.078 2.598 54.923 0.417 -1.775 -2.169 H5 T05 40
T05 H6 H6 H 0 1 N N N N N N 8.143 1.071 50.547 -4.154 0.304 2.707 H6 T05 41
T05 H7 H7 H 0 1 N N N N N N 4.438 2.492 51.352 -2.639 0.728 -0.559 H7 T05 42
T05 H8 H8 H 0 1 N N N N N N 1.238 -1.588 50.033 3.521 -1.789 1.048 H8 T05 43
T05 H9 H9 H 0 1 N N N N N N -1.965 1.673 51.826 0.128 1.176 1.608 H9 T05 44
T05 H10 H10 H 0 1 N N N N N N -1.791 0.257 52.917 0.506 2.836 2.130 H10 T05 45
T05 H11 H11 H 0 1 N N N N N N -1.726 -0.300 50.432 2.808 2.585 1.216 H11 T05 46
T05 H12 H12 H 0 1 N N N N N N -0.294 -0.851 51.366 2.461 1.359 2.458 H12 T05 47
T05 H13 H13 H 0 1 N N N N N N 0.586 0.743 53.238 -0.688 2.743 -0.087 H13 T05 48
T05 H14 H14 H 0 1 N N N N N N -0.377 2.214 53.609 0.912 3.518 -0.188 H14 T05 49
T05 H15 H15 H 0 1 N N N N N N 1.860 0.587 51.235 2.870 1.912 -1.228 H15 T05 50
T05 H16 H16 H 0 1 N N N N N N 1.913 1.946 50.062 2.314 0.283 -1.683 H16 T05 51
T05 H17 H17 H 0 1 N N N N N N -0.509 1.676 49.682 1.900 -0.277 0.667 H17 T05 52
T05 H18 H18 H 0 1 N N N N N N 8.191 0.021 47.650 -6.119 2.513 3.686 H18 T05 53
T05 H19 H19 H 0 1 N N N N N N 9.458 -0.056 48.921 -4.340 2.485 3.752 H19 T05 54
T05 H20 H20 H 0 1 N N N N N N 8.885 -1.564 48.131 -5.179 3.822 2.930 H20 T05 55
T05 H21 H21 H 0 1 N N N N N N 2.167 -3.563 49.168 6.087 -3.384 0.374 H21 T05 56
T05 H22 H22 H 0 1 N N N N N N 1.500 -3.999 47.559 6.956 -2.771 1.801 H22 T05 57
T05 H23 H23 H 0 1 N N N N N N 3.133 -3.262 47.684 5.242 -3.235 1.933 H23 T05 58
T05 H24 H24 H 0 1 N N N N N N 0.690 0.360 45.696 6.847 1.537 0.175 H24 T05 59
T05 H25 H25 H 0 1 N N N N N N 7.090 0.370 56.682 -2.854 -5.790 0.501 H25 T05 60
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
T05 O31 C30 DOUB N N 1
T05 N32 C30 SING N N 2
T05 N32 C33 SING N N 3
T05 C30 C29 SING N N 4
T05 O34 C33 DOUB N N 5
T05 C33 N27 SING N N 6
T05 C29 C35 SING N N 7
T05 C29 C28 DOUB N N 8
T05 C1 C2 SING N N 9
T05 N27 C28 SING N N 10
T05 N27 C25 SING N N 11
T05 C3 C2 DOUB Y N 12
T05 C3 C4 SING Y N 13
T05 C2 C7 SING Y N 14
T05 C25 C26 SING N N 15
T05 C25 C24 SING N N 16
T05 C4 C5 DOUB Y N 17
T05 C7 C6 DOUB Y N 18
T05 C26 N21 SING N N 19
T05 C24 C23 SING N N 20
T05 O20 S18 DOUB N N 21
T05 C5 C6 SING Y N 22
T05 C6 O8 SING N N 23
T05 N21 S18 SING N N 24
T05 N21 C22 SING N N 25
T05 C23 C22 SING N N 26
T05 S18 C11 SING N N 27
T05 S18 O19 DOUB N N 28
T05 C10 C9 DOUB Y N 29
T05 C10 C11 SING Y N 30
T05 O8 C9 SING N N 31
T05 C9 C14 SING Y N 32
T05 C11 C12 DOUB Y N 33
T05 C12 C13 SING Y N 34
T05 C14 C13 DOUB Y N 35
T05 C14 C15 SING N N 36
T05 O17 C15 DOUB N N 37
T05 C15 O16 SING N N 38
T05 C4 H1 SING N N 39
T05 C13 H2 SING N N 40
T05 C3 H3 SING N N 41
T05 C5 H4 SING N N 42
T05 C12 H5 SING N N 43
T05 C7 H6 SING N N 44
T05 C10 H7 SING N N 45
T05 C28 H8 SING N N 46
T05 C23 H9 SING N N 47
T05 C23 H10 SING N N 48
T05 C24 H11 SING N N 49
T05 C24 H12 SING N N 50
T05 C22 H13 SING N N 51
T05 C22 H14 SING N N 52
T05 C26 H15 SING N N 53
T05 C26 H16 SING N N 54
T05 C25 H17 SING N N 55
T05 C1 H18 SING N N 56
T05 C1 H19 SING N N 57
T05 C1 H20 SING N N 58
T05 C35 H21 SING N N 59
T05 C35 H22 SING N N 60
T05 C35 H23 SING N N 61
T05 N32 H24 SING N N 62
T05 O16 H25 SING N N 63
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
T05 SMILES ACDLabs 12.01 O=S(=O)(c2cc(Oc1cc(ccc1)C)c(C(=O)O)cc2)N4CCCC(N3C=C(C(=O)NC3=O)C)C4
T05 InChI InChI 1.03 InChI=1S/C24H25N3O7S/c1-15-5-3-7-18(11-15)34-21-12-19(8-9-20(21)23(29)30)35(32,33)26-10-4-6-17(14-26)27-13-16(2)22(28)25-24(27)31/h3,5,7-9,11-13,17H,4,6,10,14H2,1-2H3,(H,29,30)(H,25,28,31)/t17-/m0/s1
T05 InChIKey InChI 1.03 HYOKWKXYBOKTDO-KRWDZBQOSA-N
T05 SMILES_CANONICAL CACTVS 3.370 Cc1cccc(Oc2cc(ccc2C(O)=O)[S](=O)(=O)N3CCC[C@@H](C3)N4C=C(C)C(=O)NC4=O)c1
T05 SMILES CACTVS 3.370 Cc1cccc(Oc2cc(ccc2C(O)=O)[S](=O)(=O)N3CCC[CH](C3)N4C=C(C)C(=O)NC4=O)c1
T05 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 Cc1cccc(c1)Oc2cc(ccc2C(=O)O)S(=O)(=O)N3CCC[C@@H](C3)N4C=C(C(=O)NC4=O)C
T05 SMILES "OpenEye OEToolkits" 1.7.6 Cc1cccc(c1)Oc2cc(ccc2C(=O)O)S(=O)(=O)N3CCCC(C3)N4C=C(C(=O)NC4=O)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
T05 "SYSTEMATIC NAME" ACDLabs 12.01 "4-{[(3S)-3-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)piperidin-1-yl]sulfonyl}-2-(3-methylphenoxy)benzoic acid"
T05 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "4-[(3S)-3-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]piperidin-1-yl]sulfonyl-2-(3-methylphenoxy)benzoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
T05 'Create component' 2012-10-23 RCSB
T05 'Initial release' 2012-10-26 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
T05 C4 C 3.000 -3.750 1
T05 C13 C 10.794 -3.750 2
T05 C3 C 3.000 -2.250 3
T05 C5 C 4.299 -4.500 4
T05 C12 C 10.794 -2.250 5
T05 C7 C 5.598 -2.250 6
T05 C10 C 8.196 -2.250 7
T05 C14 C 9.495 -4.500 8
T05 C2 C 4.299 -1.500 9
T05 C6 C 5.598 -3.750 10
T05 C9 C 8.196 -3.750 11
T05 C11 C 9.495 -1.500 12
T05 C28 C 13.392 3.750 13
T05 C29 C 14.691 4.500 14
T05 C30 C 14.691 6.000 15
T05 C33 C 12.093 6.000 16
T05 C15 C 9.495 -6.000 17
T05 C23 C 8.196 3.750 18
T05 C24 C 9.495 4.500 19
T05 C22 C 8.196 2.250 20
T05 C26 C 10.794 2.250 21
T05 C25 C 10.794 3.750 22
T05 C1 C 4.299 0.000 23
T05 C35 C 15.990 3.750 24
T05 N32 N 13.392 6.750 25
T05 N27 N 12.093 4.500 26
T05 N21 N 9.495 1.500 27
T05 O31 O 15.990 6.750 28
T05 O34 O 10.794 6.750 29
T05 O16 O 8.196 -6.750 30
T05 O19 O 7.995 0.000 31
T05 O20 O 10.995 0.000 32
T05 O17 O 10.794 -6.750 33
T05 O8 O 6.897 -4.500 34
T05 S18 S 9.495 0.000 35
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
T05 O31 C30 DOUBLE NONE 1
T05 N32 C30 SINGLE NONE 2
T05 N32 C33 SINGLE NONE 3
T05 C30 C29 SINGLE NONE 4
T05 O34 C33 DOUBLE NONE 5
T05 C33 N27 SINGLE NONE 6
T05 C29 C35 SINGLE NONE 7
T05 C29 C28 DOUBLE NONE 8
T05 C1 C2 SINGLE NONE 9
T05 N27 C28 SINGLE NONE 10
T05 C25 N27 SINGLE BEGINDASH 11
T05 C3 C2 SINGLE NONE 12
T05 C3 C4 DOUBLE NONE 13
T05 C2 C7 DOUBLE NONE 14
T05 C25 C26 SINGLE NONE 15
T05 C25 C24 SINGLE NONE 16
T05 C4 C5 SINGLE NONE 17
T05 C7 C6 SINGLE NONE 18
T05 C26 N21 SINGLE NONE 19
T05 C24 C23 SINGLE NONE 20
T05 O20 S18 DOUBLE NONE 21
T05 C5 C6 DOUBLE NONE 22
T05 C6 O8 SINGLE NONE 23
T05 N21 S18 SINGLE NONE 24
T05 N21 C22 SINGLE NONE 25
T05 C23 C22 SINGLE NONE 26
T05 S18 C11 SINGLE NONE 27
T05 S18 O19 DOUBLE NONE 28
T05 C10 C9 SINGLE NONE 29
T05 C10 C11 DOUBLE NONE 30
T05 O8 C9 SINGLE NONE 31
T05 C9 C14 DOUBLE NONE 32
T05 C11 C12 SINGLE NONE 33
T05 C12 C13 DOUBLE NONE 34
T05 C14 C13 SINGLE NONE 35
T05 C14 C15 SINGLE NONE 36
T05 O17 C15 DOUBLE NONE 37
T05 C15 O16 SINGLE NONE 38
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
T05 MurckoScaffold S1 scaffold 'O=c1ccn([C@H]2CCCN(S(=O)(=O)c3cccc(Oc4ccccc4)c3)C2)c(=O)[nH]1' InChI=1S/C21H21N3O5S/c25-20-11-13-24(21(26)22-20)16-6-5-12-23(15-16)30(27,28)19-10-4-9-18(14-19)29-17-7-2-1-3-8-17/h1-4,7-11,13-14,16H,5-6,12,15H2,(H,22,25,26)/t16-/m0/s1 UYYKSGIDWWMCHC-INIZCTEOSA-N
T05 phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
T05 pyrimidine F2 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
T05 Z45516134 F3 fragment CCN(CC)S(=O)(=O)c1ccc(C)cc1 InChI=1S/C11H17NO2S/c1-4-12(5-2)15(13,14)11-8-6-10(3)7-9-11/h6-9H,4-5H2,1-3H3 AOJBACHWNDMRQP-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
T05 C4 S1 1
T05 C13 S1 1
T05 C3 S1 1
T05 C5 S1 1
T05 C12 S1 1
T05 C7 S1 1
T05 C10 S1 1
T05 C14 S1 1
T05 C2 S1 1
T05 C6 S1 1
T05 C9 S1 1
T05 C11 S1 1
T05 C28 S1 1
T05 C29 S1 1
T05 C30 S1 1
T05 C33 S1 1
T05 C23 S1 1
T05 C24 S1 1
T05 C22 S1 1
T05 C26 S1 1
T05 C25 S1 1
T05 N32 S1 1
T05 N27 S1 1
T05 N21 S1 1
T05 O31 S1 1
T05 O34 S1 1
T05 O19 S1 1
T05 O20 S1 1
T05 O8 S1 1
T05 S18 S1 1
T05 C4 F1 1
T05 C3 F1 1
T05 C2 F1 1
T05 C7 F1 1
T05 C6 F1 1
T05 C5 F1 1
T05 C13 F1 2
T05 C12 F1 2
T05 C11 F1 2
T05 C10 F1 2
T05 C9 F1 2
T05 C14 F1 2
T05 C29 F2 1
T05 C30 F2 1
T05 N32 F2 1
T05 C33 F2 1
T05 N27 F2 1
T05 C28 F2 1
T05 C23 F3 1
T05 C22 F3 1
T05 N21 F3 1
T05 C26 F3 1
T05 C25 F3 1
T05 S18 F3 1
T05 O20 F3 1
T05 O19 F3 1
T05 C11 F3 1
T05 C10 F3 1
T05 C9 F3 1
T05 C14 F3 1
T05 C15 F3 1
T05 C13 F3 1
T05 C12 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id T05
_pdbe_chem_comp_rdkit_properties.exactmw 499.141
_pdbe_chem_comp_rdkit_properties.amw 499.545
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 8
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 35
_pdbe_chem_comp_rdkit_properties.NumAtoms 60
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.292
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 236.291
_pdbe_chem_comp_rdkit_properties.tpsa 138.770
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.273
_pdbe_chem_comp_rdkit_properties.CrippenMR 126.512
_pdbe_chem_comp_rdkit_properties.chi0v 17.424
_pdbe_chem_comp_rdkit_properties.chi1v 10.200
_pdbe_chem_comp_rdkit_properties.chi2v 5.242
_pdbe_chem_comp_rdkit_properties.chi3v 5.242
_pdbe_chem_comp_rdkit_properties.chi4v 3.318
_pdbe_chem_comp_rdkit_properties.chi0n 41.608
_pdbe_chem_comp_rdkit_properties.chi1n 21.115
_pdbe_chem_comp_rdkit_properties.chi2n 3.859
_pdbe_chem_comp_rdkit_properties.chi3n 3.859
_pdbe_chem_comp_rdkit_properties.chi4n 2.361
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.700
_pdbe_chem_comp_rdkit_properties.kappa1 8.172
_pdbe_chem_comp_rdkit_properties.kappa2 9.510
_pdbe_chem_comp_rdkit_properties.kappa3 5.053
_pdbe_chem_comp_rdkit_properties.Phi 2.220
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
T05 UniChem ZINC ZINC000095590855
T05 UniChem 'PubChem TPHARMA' 163509475
T05 UniChem PubChem 66553127
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
T05 C4 4.865 -0.073 -0.740 ETKDGv3 1
T05 C13 0.264 4.619 0.314 ETKDGv3 2
T05 C3 5.135 -1.138 0.024 ETKDGv3 3
T05 C5 3.957 0.982 -0.247 ETKDGv3 4
T05 C12 -0.258 4.103 -0.803 ETKDGv3 5
T05 C7 3.691 -0.306 1.810 ETKDGv3 6
T05 C10 1.013 2.046 -0.529 ETKDGv3 7
T05 C14 1.240 3.847 1.128 ETKDGv3 8
T05 C2 4.535 -1.257 1.375 ETKDGv3 9
T05 C6 3.377 0.866 0.962 ETKDGv3 10
T05 C9 1.613 2.612 0.710 ETKDGv3 11
T05 C11 0.123 2.747 -1.242 ETKDGv3 12
T05 C28 -2.343 -2.367 1.127 ETKDGv3 13
T05 C29 -3.092 -2.642 2.208 ETKDGv3 14
T05 C30 -4.525 -2.287 2.216 ETKDGv3 15
T05 C33 -4.274 -1.302 -0.033 ETKDGv3 16
T05 C15 1.777 4.470 2.366 ETKDGv3 17
T05 C23 -1.465 -1.772 -3.602 ETKDGv3 18
T05 C24 -2.414 -2.117 -2.450 ETKDGv3 19
T05 C22 -1.316 -0.252 -3.746 ETKDGv3 20
T05 C26 -1.811 0.109 -1.402 ETKDGv3 21
T05 C25 -1.970 -1.402 -1.161 ETKDGv3 22
T05 C1 4.815 -2.466 2.217 ETKDGv3 23
T05 C35 -2.493 -3.381 3.373 ETKDGv3 24
T05 N32 -5.092 -1.612 1.095 ETKDGv3 25
T05 N27 -2.879 -1.686 -0.030 ETKDGv3 26
T05 N21 -0.835 0.339 -2.484 ETKDGv3 27
T05 O31 -5.253 -2.578 3.203 ETKDGv3 28
T05 O34 -4.784 -0.698 -1.014 ETKDGv3 29
T05 O16 1.331 5.729 2.757 ETKDGv3 30
T05 O19 0.349 2.297 -3.847 ETKDGv3 31
T05 O20 -1.905 2.723 -2.985 ETKDGv3 32
T05 O17 2.636 3.880 3.075 ETKDGv3 33
T05 O8 2.515 1.849 1.470 ETKDGv3 34
T05 S18 -0.589 2.055 -2.697 ETKDGv3 35
T05 H1 5.311 0.018 -1.722 ETKDGv3 36
T05 H2 -0.036 5.615 0.617 ETKDGv3 37
T05 H3 5.799 -1.908 -0.347 ETKDGv3 38
T05 H4 3.778 1.850 -0.868 ETKDGv3 39
T05 H5 -0.965 4.683 -1.382 ETKDGv3 40
T05 H6 3.225 -0.389 2.784 ETKDGv3 41
T05 H7 1.276 1.043 -0.840 ETKDGv3 42
T05 H8 -1.301 -2.665 1.128 ETKDGv3 43
T05 H9 -1.861 -2.199 -4.549 ETKDGv3 44
T05 H10 -0.466 -2.224 -3.410 ETKDGv3 45
T05 H11 -3.443 -1.820 -2.740 ETKDGv3 46
T05 H12 -2.409 -3.217 -2.285 ETKDGv3 47
T05 H13 -2.292 0.194 -4.048 ETKDGv3 48
T05 H14 -0.582 -0.057 -4.557 ETKDGv3 49
T05 H15 -1.446 0.569 -0.459 ETKDGv3 50
T05 H16 -2.785 0.578 -1.656 ETKDGv3 51
T05 H17 -0.952 -1.788 -0.921 ETKDGv3 52
T05 H18 5.755 -2.960 1.893 ETKDGv3 53
T05 H19 3.977 -3.188 2.117 ETKDGv3 54
T05 H20 4.925 -2.180 3.284 ETKDGv3 55
T05 H21 -2.707 -4.466 3.271 ETKDGv3 56
T05 H22 -1.393 -3.232 3.425 ETKDGv3 57
T05 H23 -2.927 -3.015 4.328 ETKDGv3 58
T05 H24 -6.103 -1.348 1.098 ETKDGv3 59
T05 H25 1.686 6.170 3.597 ETKDGv3 60
#