data_SSA
#
_chem_comp.id SSA
_chem_comp.name "5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C13 H19 N7 O8 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 433.397
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code SSA
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1SET
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SSA N10 N10 N 0 1 N N N N N N 52.830 12.169 63.420 -3.443 0.189 -2.620 N10 SSA 1
SSA CA CA C 0 1 N N S N N N 53.627 13.307 63.046 -2.526 -0.476 -3.554 CA SSA 2
SSA CB CB C 0 1 N N N N N N 55.114 13.049 63.257 -3.097 -0.399 -4.971 CB SSA 3
SSA OG OG O 0 1 N N N N N N 55.610 11.928 62.500 -4.369 -1.049 -5.008 OG SSA 4
SSA C9 C9 C 0 1 N N N N N N 53.340 13.427 61.576 -1.184 0.209 -3.515 C9 SSA 5
SSA O9 O9 O 0 1 N N N N N N 52.755 12.546 60.944 -1.116 1.393 -3.261 O9 SSA 6
SSA N8 N8 N 0 1 N N N N N N 53.831 14.527 61.084 -0.061 -0.492 -3.763 N8 SSA 7
SSA S1 S1 S 0 1 N N N N N N 53.995 14.825 59.513 1.412 0.261 -3.721 S1 SSA 8
SSA O1S O1S O 0 1 N N N N N N 52.691 15.008 58.942 2.378 -0.772 -3.848 O1S SSA 9
SSA O2S O2S O 0 1 N N N N N N 54.776 16.018 59.435 1.295 1.387 -4.579 O2S SSA 10
SSA "O5'" O5* O 0 1 N N N N N N 54.845 13.725 58.821 1.594 0.827 -2.320 "O5'" SSA 11
SSA "C5'" C5* C 0 1 N N N N N N 56.113 13.360 59.413 2.230 -0.189 -1.543 "C5'" SSA 12
SSA "C4'" C4* C 0 1 N N R N N N 57.062 12.839 58.320 2.443 0.317 -0.115 "C4'" SSA 13
SSA "O4'" O4* O 0 1 N N N N N N 56.555 11.853 57.390 1.174 0.608 0.493 "O4'" SSA 14
SSA "C3'" C3* C 0 1 N N S N N N 57.434 14.011 57.424 3.122 -0.775 0.732 "C3'" SSA 15
SSA "O3'" O3* O 0 1 N N N N N N 58.372 14.779 58.168 4.378 -0.317 1.237 "O3'" SSA 16
SSA "C2'" C2* C 0 1 N N R N N N 58.065 13.331 56.233 2.126 -1.022 1.896 "C2'" SSA 17
SSA "O2'" O2* O 0 1 N N N N N N 59.340 12.811 56.624 2.820 -1.186 3.134 "O2'" SSA 18
SSA "C1'" C1* C 0 1 N N R N N N 57.086 12.157 56.075 1.296 0.287 1.896 "C1'" SSA 19
SSA N9 N9 N 0 1 Y N N N N N 56.036 12.437 55.051 -0.023 0.065 2.491 N9 SSA 20
SSA C8 C8 C 0 1 Y N N N N N 54.797 13.026 55.180 -1.132 -0.393 1.845 C8 SSA 21
SSA N7 N7 N 0 1 Y N N N N N 54.066 12.988 54.103 -2.131 -0.471 2.676 N7 SSA 22
SSA C5 C5 C 0 1 Y N N N N N 54.829 12.235 53.215 -1.726 -0.068 3.905 C5 SSA 23
SSA C6 C6 C 0 1 Y N N N N N 54.595 11.775 51.913 -2.349 0.056 5.159 C6 SSA 24
SSA N6 N6 N 0 1 N N N N N N 53.445 11.907 51.299 -3.683 -0.272 5.322 N6 SSA 25
SSA N1 N1 N 0 1 Y N N N N N 55.601 11.170 51.276 -1.627 0.497 6.183 N1 SSA 26
SSA C2 C2 C 0 1 Y N N N N N 56.750 10.961 51.915 -0.353 0.813 6.037 C2 SSA 27
SSA N3 N3 N 0 1 Y N N N N N 57.068 11.234 53.172 0.270 0.712 4.882 N3 SSA 28
SSA C4 C4 C 0 1 Y N N N N N 56.053 11.945 53.757 -0.368 0.274 3.802 C4 SSA 29
SSA HN11 1HN1 H 0 0 N N N N N N 51.834 12.341 63.278 -4.350 -0.232 -2.754 HN11 SSA 30
SSA HN12 2HN1 H 0 0 N N N N N N 53.024 11.877 64.378 -3.521 1.148 -2.924 HN12 SSA 31
SSA HA HA H 0 1 N N N N N N 53.388 14.216 63.645 -2.408 -1.520 -3.266 HA SSA 32
SSA HB1 1HB H 0 1 N N N N N N 55.709 13.966 63.042 -3.214 0.645 -5.260 HB1 SSA 33
SSA HB2 2HB H 0 1 N N N N N N 55.345 12.928 64.341 -2.416 -0.893 -5.665 HB2 SSA 34
SSA HOG HOG H 0 1 N N N N N N 56.537 11.767 62.631 -4.693 -0.978 -5.916 HOG SSA 35
SSA HN8 HN8 H 0 1 N N N N N N 54.072 15.118 61.879 -0.116 -1.439 -3.967 HN8 SSA 36
SSA "H5'1" 1H5* H 0 0 N N N N N N 56.562 14.198 59.995 1.600 -1.079 -1.523 "H5'1" SSA 37
SSA "H5'2" 2H5* H 0 0 N N N N N N 55.992 12.631 60.248 3.194 -0.437 -1.988 "H5'2" SSA 38
SSA "H4'" H4* H 0 1 N N N N N N 57.877 12.356 58.907 3.062 1.213 -0.129 "H4'" SSA 39
SSA "H3'" H3* H 0 1 N N N N N N 56.607 14.686 57.103 3.256 -1.684 0.146 "H3'" SSA 40
SSA "HO3'" *HO3 H 0 0 N N N N N N 58.604 15.510 57.608 4.723 -1.019 1.806 "HO3'" SSA 41
SSA "H2'" H2* H 0 1 N N N N N N 58.219 13.967 55.330 1.492 -1.884 1.690 "H2'" SSA 42
SSA "HO2'" *HO2 H 0 0 N N N N N N 59.737 12.383 55.874 3.314 -2.014 3.070 "HO2'" SSA 43
SSA "H1'" H1* H 0 1 N N N N N N 57.611 11.255 55.681 1.827 1.077 2.426 "H1'" SSA 44
SSA H8 H8 H 0 1 N N N N N N 54.410 13.502 56.096 -1.177 -0.653 0.798 H8 SSA 45
SSA HN61 1HN6 H 0 0 N N N N N N 53.274 11.572 50.350 -4.102 -0.181 6.192 HN61 SSA 46
SSA HN62 2HN6 H 0 0 N N N N N N 53.202 12.897 51.318 -4.200 -0.594 4.567 HN62 SSA 47
SSA H2 H2 H 0 1 N N N N N N 57.552 10.495 51.318 0.195 1.168 6.896 H2 SSA 48
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SSA N10 CA SING N N 1
SSA N10 HN11 SING N N 2
SSA N10 HN12 SING N N 3
SSA CA CB SING N N 4
SSA CA C9 SING N N 5
SSA CA HA SING N N 6
SSA CB OG SING N N 7
SSA CB HB1 SING N N 8
SSA CB HB2 SING N N 9
SSA OG HOG SING N N 10
SSA C9 O9 DOUB N N 11
SSA C9 N8 SING N N 12
SSA N8 S1 SING N N 13
SSA N8 HN8 SING N N 14
SSA S1 O1S DOUB N N 15
SSA S1 O2S DOUB N N 16
SSA S1 "O5'" SING N N 17
SSA "O5'" "C5'" SING N N 18
SSA "C5'" "C4'" SING N N 19
SSA "C5'" "H5'1" SING N N 20
SSA "C5'" "H5'2" SING N N 21
SSA "C4'" "O4'" SING N N 22
SSA "C4'" "C3'" SING N N 23
SSA "C4'" "H4'" SING N N 24
SSA "O4'" "C1'" SING N N 25
SSA "C3'" "O3'" SING N N 26
SSA "C3'" "C2'" SING N N 27
SSA "C3'" "H3'" SING N N 28
SSA "O3'" "HO3'" SING N N 29
SSA "C2'" "O2'" SING N N 30
SSA "C2'" "C1'" SING N N 31
SSA "C2'" "H2'" SING N N 32
SSA "O2'" "HO2'" SING N N 33
SSA "C1'" N9 SING N N 34
SSA "C1'" "H1'" SING N N 35
SSA N9 C8 SING Y N 36
SSA N9 C4 SING Y N 37
SSA C8 N7 DOUB Y N 38
SSA C8 H8 SING N N 39
SSA N7 C5 SING Y N 40
SSA C5 C6 SING Y N 41
SSA C5 C4 DOUB Y N 42
SSA C6 N6 SING N N 43
SSA C6 N1 DOUB Y N 44
SSA N6 HN61 SING N N 45
SSA N6 HN62 SING N N 46
SSA N1 C2 SING Y N 47
SSA C2 N3 DOUB Y N 48
SSA C2 H2 SING N N 49
SSA N3 C4 SING Y N 50
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SSA SMILES ACDLabs 10.04 O=C(NS(=O)(=O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O)C(N)CO
SSA SMILES_CANONICAL CACTVS 3.341 N[C@@H](CO)C(=O)N[S](=O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23
SSA SMILES CACTVS 3.341 N[CH](CO)C(=O)N[S](=O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23
SSA SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COS(=O)(=O)NC(=O)[C@H](CO)N)O)O)N
SSA SMILES "OpenEye OEToolkits" 1.5.0 c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COS(=O)(=O)NC(=O)C(CO)N)O)O)N
SSA InChI InChI 1.03 InChI=1S/C13H19N7O8S/c14-5(1-21)12(24)19-29(25,26)27-2-6-8(22)9(23)13(28-6)20-4-18-7-10(15)16-3-17-11(7)20/h3-6,8-9,13,21-23H,1-2,14H2,(H,19,24)(H2,15,16,17)/t5-,6+,8+,9+,13+/m0/s1
SSA InChIKey InChI 1.03 HQXFJGONGJPTLZ-YTMOPEAISA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
SSA "SYSTEMATIC NAME" ACDLabs 10.04 "5'-O-(L-serylsulfamoyl)adenosine"
SSA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl N-[(2S)-2-amino-3-hydroxy-propanoyl]sulfamate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SSA 'Create component' 1999-07-08 RCSB
SSA 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id SSA
_pdbe_chem_comp_drugbank_details.drugbank_id DB03869
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name "5'-O-(L-Serylsulfamoyl)adenosine"
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_synonyms.comp_id SSA
_pdbe_chem_comp_synonyms.name "5'-O-(L-Serylsulfamoyl)adenosine"
_pdbe_chem_comp_synonyms.provenance DrugBank
_pdbe_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_classification.comp_id SSA
_pdbe_chem_comp_drugbank_classification.drugbank_id DB03869
_pdbe_chem_comp_drugbank_classification.parent 'Purine nucleosides'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Purine nucleosides'
_pdbe_chem_comp_drugbank_classification.superclass 'Nucleosides, nucleotides, and analogues'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as purine nucleosides. These are compounds comprising a purine base attached to a ribosyl or deoxyribosyl moiety.'
#
_pdbe_chem_comp_drugbank_targets.comp_id SSA
_pdbe_chem_comp_drugbank_targets.drugbank_id DB03869
_pdbe_chem_comp_drugbank_targets.name 'Threonine--tRNA ligase'
_pdbe_chem_comp_drugbank_targets.organism 'Shigella flexneri'
_pdbe_chem_comp_drugbank_targets.uniprot_id P0A8M5
_pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
SSA N10 N 8.660 8.344 1
SSA CA C 7.655 7.231 2
SSA CB C 6.188 7.546 3
SSA OG O 5.727 8.973 4
SSA C9 C 8.116 5.804 5
SSA O9 O 9.582 5.489 6
SSA N8 N 7.110 4.691 7
SSA S1 S 7.571 3.264 8
SSA O1S O 8.998 3.724 9
SSA O2S O 6.144 2.803 10
SSA "O5'" O 8.032 1.836 11
SSA "C5'" C 7.027 0.723 12
SSA "C4'" C 7.487 -0.704 13
SSA "O4'" O 6.604 -1.916 14
SSA "C3'" C 8.913 -1.170 15
SSA "O3'" O 10.129 -0.291 16
SSA "C2'" C 8.911 -2.670 17
SSA "O2'" O 10.123 -3.554 18
SSA "C1'" C 7.483 -3.131 19
SSA N9 N 7.018 -4.557 20
SSA C8 C 7.893 -5.764 21
SSA N7 N 7.018 -6.971 22
SSA C5 C 5.598 -6.514 23
SSA C6 C 4.299 -7.264 24
SSA N6 N 4.299 -8.764 25
SSA N1 N 3.000 -6.514 26
SSA C2 C 3.000 -5.014 27
SSA N3 N 4.299 -4.264 28
SSA C4 C 5.598 -5.014 29
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
SSA CA N10 SINGLE BEGINDASH 1
SSA CA CB SINGLE NONE 2
SSA CA C9 SINGLE NONE 3
SSA CB OG SINGLE NONE 4
SSA C9 O9 DOUBLE NONE 5
SSA C9 N8 SINGLE NONE 6
SSA N8 S1 SINGLE NONE 7
SSA S1 O1S DOUBLE NONE 8
SSA S1 O2S DOUBLE NONE 9
SSA S1 "O5'" SINGLE NONE 10
SSA "O5'" "C5'" SINGLE NONE 11
SSA "C4'" "C5'" SINGLE BEGINDASH 12
SSA "C4'" "O4'" SINGLE NONE 13
SSA "C4'" "C3'" SINGLE NONE 14
SSA "O4'" "C1'" SINGLE NONE 15
SSA "C3'" "O3'" SINGLE BEGINWEDGE 16
SSA "C3'" "C2'" SINGLE NONE 17
SSA "C2'" "O2'" SINGLE BEGINWEDGE 18
SSA "C2'" "C1'" SINGLE NONE 19
SSA "C1'" N9 SINGLE BEGINDASH 20
SSA N9 C8 SINGLE NONE 21
SSA N9 C4 SINGLE NONE 22
SSA C8 N7 DOUBLE NONE 23
SSA N7 C5 SINGLE NONE 24
SSA C5 C6 DOUBLE NONE 25
SSA C5 C4 SINGLE NONE 26
SSA C6 N6 SINGLE NONE 27
SSA C6 N1 SINGLE NONE 28
SSA N1 C2 DOUBLE NONE 29
SSA C2 N3 SINGLE NONE 30
SSA N3 C4 DOUBLE NONE 31
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
SSA MurckoScaffold S1 scaffold 'c1ncc2ncn([C@H]3CCCO3)c2n1' InChI=1S/C9H10N4O/c1-2-8(14-3-1)13-6-12-7-4-10-5-11-9(7)13/h4-6,8H,1-3H2/t8-/m1/s1 DAKONNSVCLKUJN-MRVPVSSYSA-N
SSA adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N
SSA amide F2 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
SSA imidazole F3 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
SSA peptide F4 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
SSA purine F5 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
SSA pyrimidine F6 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
SSA ribose F7 fragment OCC1OCC(O)C1O InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2 KZVAAIRBJJYZOW-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
SSA "C4'" S1 1
SSA "O4'" S1 1
SSA "C3'" S1 1
SSA "C2'" S1 1
SSA "C1'" S1 1
SSA N9 S1 1
SSA C8 S1 1
SSA N7 S1 1
SSA C5 S1 1
SSA C6 S1 1
SSA N1 S1 1
SSA C2 S1 1
SSA N3 S1 1
SSA C4 S1 1
SSA N1 F1 1
SSA C6 F1 1
SSA C5 F1 1
SSA C4 F1 1
SSA N3 F1 1
SSA C2 F1 1
SSA N9 F1 1
SSA C8 F1 1
SSA N7 F1 1
SSA N6 F1 1
SSA N8 F2 1
SSA C9 F2 1
SSA O9 F2 1
SSA CA F2 1
SSA C5 F3 1
SSA C4 F3 1
SSA N9 F3 1
SSA C8 F3 1
SSA N7 F3 1
SSA O9 F4 1
SSA C9 F4 1
SSA CA F4 1
SSA N10 F4 1
SSA N7 F5 1
SSA C8 F5 1
SSA N9 F5 1
SSA C4 F5 1
SSA C5 F5 1
SSA C6 F5 1
SSA N1 F5 1
SSA C2 F5 1
SSA N3 F5 1
SSA C5 F6 1
SSA C6 F6 1
SSA N1 F6 1
SSA C2 F6 1
SSA N3 F6 1
SSA C4 F6 1
SSA "C2'" F7 1
SSA "C3'" F7 1
SSA "C4'" F7 1
SSA "O4'" F7 1
SSA "C1'" F7 1
SSA "C5'" F7 1
SSA "O5'" F7 1
SSA "O3'" F7 1
SSA "O2'" F7 1
#
_pdbe_chem_comp_rdkit_properties.comp_id SSA
_pdbe_chem_comp_rdkit_properties.exactmw 433.102
_pdbe_chem_comp_rdkit_properties.amw 433.403
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 15
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 8
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 12
_pdbe_chem_comp_rdkit_properties.NumHBD 6
_pdbe_chem_comp_rdkit_properties.NumHBA 14
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 29
_pdbe_chem_comp_rdkit_properties.NumAtoms 48
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 16
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.538
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 190.320
_pdbe_chem_comp_rdkit_properties.tpsa 238.030
_pdbe_chem_comp_rdkit_properties.CrippenClogP -5.084
_pdbe_chem_comp_rdkit_properties.CrippenMR 90.705
_pdbe_chem_comp_rdkit_properties.chi0v 14.121
_pdbe_chem_comp_rdkit_properties.chi1v 8.160
_pdbe_chem_comp_rdkit_properties.chi2v 3.635
_pdbe_chem_comp_rdkit_properties.chi3v 3.635
_pdbe_chem_comp_rdkit_properties.chi4v 2.280
_pdbe_chem_comp_rdkit_properties.chi0n 32.305
_pdbe_chem_comp_rdkit_properties.chi1n 15.756
_pdbe_chem_comp_rdkit_properties.chi2n 2.951
_pdbe_chem_comp_rdkit_properties.chi3n 2.951
_pdbe_chem_comp_rdkit_properties.chi4n 1.772
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.470
_pdbe_chem_comp_rdkit_properties.kappa1 7.654
_pdbe_chem_comp_rdkit_properties.kappa2 8.107
_pdbe_chem_comp_rdkit_properties.kappa3 4.271
_pdbe_chem_comp_rdkit_properties.Phi 2.140
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
SSA UniChem DrugBank DB03869
SSA UniChem ZINC ZINC000013542770
SSA UniChem SureChEMBL SCHEMBL4313369
SSA UniChem BindingDb 50339906
SSA UniChem BRENDA 15565
SSA UniChem 'Probes And Drugs' PD059451
SSA UniChem Nikkaji J1.419.260C
SSA UniChem 'PubChem TPHARMA' 15501808
SSA UniChem PubChem 445736
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
SSA N10 6.470 0.755 0.800 ETKDGv3 1
SSA CA 5.911 1.273 -0.449 ETKDGv3 2
SSA CB 5.646 0.127 -1.439 ETKDGv3 3
SSA OG 4.810 -0.849 -0.873 ETKDGv3 4
SSA C9 4.646 2.047 -0.182 ETKDGv3 5
SSA O9 4.440 3.125 -0.803 ETKDGv3 6
SSA N8 3.664 1.549 0.736 ETKDGv3 7
SSA S1 2.141 2.343 0.971 ETKDGv3 8
SSA O1S 2.347 3.551 1.840 ETKDGv3 9
SSA O2S 1.574 2.779 -0.353 ETKDGv3 10
SSA "O5'" 1.058 1.294 1.745 ETKDGv3 11
SSA "C5'" 0.793 0.211 0.886 ETKDGv3 12
SSA "C4'" -0.160 -0.764 1.584 ETKDGv3 13
SSA "O4'" -1.374 -0.110 1.891 ETKDGv3 14
SSA "C3'" -0.459 -1.987 0.718 ETKDGv3 15
SSA "O3'" 0.385 -3.066 1.029 ETKDGv3 16
SSA "C2'" -1.892 -2.289 1.060 ETKDGv3 17
SSA "O2'" -1.964 -3.127 2.186 ETKDGv3 18
SSA "C1'" -2.436 -0.903 1.404 ETKDGv3 19
SSA N9 -3.025 -0.273 0.219 ETKDGv3 20
SSA C8 -2.857 1.095 -0.216 ETKDGv3 21
SSA N7 -3.777 1.534 -1.035 ETKDGv3 22
SSA C5 -4.678 0.448 -1.202 ETKDGv3 23
SSA C6 -5.863 0.402 -1.809 ETKDGv3 24
SSA N6 -6.379 1.512 -2.543 ETKDGv3 25
SSA N1 -6.635 -0.813 -1.666 ETKDGv3 26
SSA C2 -6.204 -1.811 -0.931 ETKDGv3 27
SSA N3 -4.937 -1.719 -0.237 ETKDGv3 28
SSA C4 -4.228 -0.647 -0.425 ETKDGv3 29
SSA HN11 6.694 1.567 1.421 ETKDGv3 30
SSA HN12 7.385 0.295 0.586 ETKDGv3 31
SSA HA 6.654 1.961 -0.915 ETKDGv3 32
SSA HB1 6.612 -0.352 -1.705 ETKDGv3 33
SSA HB2 5.210 0.528 -2.384 ETKDGv3 34
SSA HOG 3.877 -0.592 -1.093 ETKDGv3 35
SSA HN8 3.858 0.685 1.288 ETKDGv3 36
SSA "H5'1" 1.732 -0.332 0.639 ETKDGv3 37
SSA "H5'2" 0.313 0.567 -0.053 ETKDGv3 38
SSA "H4'" 0.304 -1.092 2.541 ETKDGv3 39
SSA "H3'" -0.395 -1.743 -0.370 ETKDGv3 40
SSA "HO3'" 1.266 -2.858 0.623 ETKDGv3 41
SSA "H2'" -2.409 -2.760 0.192 ETKDGv3 42
SSA "HO2'" -2.902 -3.450 2.237 ETKDGv3 43
SSA "H1'" -3.218 -0.975 2.191 ETKDGv3 44
SSA H8 -2.043 1.724 0.118 ETKDGv3 45
SSA HN61 -7.319 1.447 -2.994 ETKDGv3 46
SSA HN62 -5.832 2.396 -2.644 ETKDGv3 47
SSA H2 -6.804 -2.705 -0.834 ETKDGv3 48
#