data_SLH
#
_chem_comp.id SLH
_chem_comp.name
'(2S)-3-(1H-imidazol-5-yl)-2-({[(3R,4aS,8aR)-2-(N-phenyl-beta-alanyl)decahydroisoquinolin-3-yl]methyl}amino)propanal'
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula 'C25 H35 N5 O2'
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2015-07-03
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 437.578
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code SLH
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5C5N
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SLH C1 C1 C 0 1 N N N N N N -26.041 -40.481 3.747 -0.817 -2.090 -0.553 C1 SLH 1
SLH C2 C2 C 0 1 N N R N N N -26.280 -40.958 5.137 -1.543 -3.256 0.127 C2 SLH 2
SLH C3 C3 C 0 1 N N N N N N -26.385 -39.751 6.014 -1.909 -4.302 -0.928 C3 SLH 3
SLH N4 N1 N 0 1 N N N N N N -27.746 -39.681 -1.262 4.224 -0.858 -0.494 N4 SLH 4
SLH C5 C4 C 0 1 N N N N N N -25.448 -41.123 7.923 -3.922 -4.946 0.401 C5 SLH 5
SLH C6 C5 C 0 1 N N N N N N -25.498 -42.286 6.974 -3.557 -3.903 1.459 C6 SLH 6
SLH C9 C6 C 0 1 N N R N N N -24.979 -42.680 3.227 -1.738 -0.520 1.201 C9 SLH 7
SLH C11 C7 C 0 1 N N S N N N -21.363 -42.989 2.024 -2.888 1.973 -1.378 C11 SLH 8
SLH C13 C8 C 0 1 Y N N N N N -19.957 -40.870 1.819 -2.377 4.169 -0.345 C13 SLH 9
SLH C14 C9 C 0 1 Y N N N N N -20.181 -40.504 0.532 -3.423 4.859 0.148 C14 SLH 10
SLH C15 C10 C 0 1 Y N N N N N -18.396 -39.517 1.182 -1.800 5.100 1.550 C15 SLH 11
SLH O1 O1 O 0 1 N N N N N N -20.650 -45.129 1.600 -2.347 0.205 -2.838 O1 SLH 12
SLH C16 C11 C 0 1 N N N N N N -20.415 -44.139 2.241 -2.972 1.227 -2.685 C16 SLH 13
SLH C12 C12 C 0 1 N N N N N N -20.775 -41.760 2.694 -2.346 3.382 -1.630 C12 SLH 14
SLH N3 N2 N 0 1 Y N N N N N -18.860 -40.236 2.194 -1.346 4.324 0.542 N3 SLH 15
SLH N2 N3 N 0 1 Y N N N N N -19.211 -39.670 0.156 -3.041 5.421 1.305 N2 SLH 16
SLH N1 N4 N 0 1 N N N N N N -22.655 -43.401 2.621 -1.989 1.258 -0.463 N1 SLH 17
SLH C10 C13 C 0 1 N N N N N N -23.568 -42.281 2.864 -2.706 0.200 0.260 C10 SLH 18
SLH C8 C14 C 0 1 N N N N N N -25.129 -43.008 4.700 -2.451 -1.703 1.864 C8 SLH 19
SLH C7 C15 C 0 1 N N S N N N -25.157 -41.817 5.593 -2.818 -2.738 0.797 C7 SLH 20
SLH C4 C16 C 0 1 N N N N N N -26.425 -40.044 7.496 -2.645 -5.466 -0.262 C4 SLH 21
SLH N N5 N 0 1 N N N N N N -25.776 -41.540 2.798 -0.590 -1.029 0.438 N SLH 22
SLH C C17 C 0 1 N N N N N N -26.166 -41.486 1.527 0.646 -0.533 0.643 C SLH 23
SLH O O2 O 0 1 N N N N N N -25.934 -42.344 0.731 0.820 0.342 1.465 O SLH 24
SLH C17 C18 C 0 1 N N N N N N -26.920 -40.258 1.041 1.812 -1.066 -0.148 C17 SLH 25
SLH C18 C19 C 0 1 N N N N N N -26.611 -40.000 -0.428 3.090 -0.339 0.275 C18 SLH 26
SLH C19 C20 C 0 1 Y N N N N N -28.102 -40.465 -2.319 5.506 -0.344 -0.281 C19 SLH 27
SLH C24 C21 C 0 1 Y N N N N N -27.414 -41.644 -2.624 6.582 -0.834 -1.010 C24 SLH 28
SLH C23 C22 C 0 1 Y N N N N N -27.817 -42.420 -3.707 7.847 -0.323 -0.797 C23 SLH 29
SLH C22 C23 C 0 1 Y N N N N N -28.902 -42.028 -4.482 8.044 0.675 0.140 C22 SLH 30
SLH C21 C24 C 0 1 Y N N N N N -29.592 -40.862 -4.191 6.974 1.165 0.867 C21 SLH 31
SLH C20 C25 C 0 1 Y N N N N N -29.179 -40.100 -3.113 5.705 0.663 0.655 C20 SLH 32
SLH H1 H1 H 0 1 N N N N N N -25.175 -39.802 3.758 0.140 -2.434 -0.945 H1 SLH 33
SLH H2 H2 H 0 1 N N N N N N -26.933 -39.932 3.412 -1.429 -1.705 -1.369 H2 SLH 34
SLH H3 H3 H 0 1 N N N N N N -27.221 -41.526 5.177 -0.892 -3.702 0.878 H3 SLH 35
SLH H4 H4 H 0 1 N N N N N N -25.515 -39.108 5.816 -2.553 -3.848 -1.682 H4 SLH 36
SLH H5 H5 H 0 1 N N N N N N -27.307 -39.213 5.747 -1.000 -4.672 -1.403 H5 SLH 37
SLH H6 H6 H 0 1 N N N N N N -27.574 -38.769 -1.634 4.085 -1.557 -1.151 H6 SLH 38
SLH H7 H7 H 0 1 N N N N N N -25.711 -41.469 8.934 -4.450 -5.774 0.874 H7 SLH 39
SLH H8 H8 H 0 1 N N N N N N -24.430 -40.706 7.931 -4.564 -4.489 -0.353 H8 SLH 40
SLH H9 H9 H 0 1 N N N N N N -26.510 -42.718 6.976 -4.466 -3.533 1.934 H9 SLH 41
SLH H10 H10 H 0 1 N N N N N N -24.773 -43.050 7.291 -2.914 -4.359 2.212 H10 SLH 42
SLH H11 H11 H 0 1 N N N N N N -25.259 -43.566 2.638 -1.390 0.172 1.967 H11 SLH 43
SLH H12 H12 H 0 1 N N N N N N -21.484 -42.802 0.947 -3.881 2.040 -0.934 H12 SLH 44
SLH H13 H13 H 0 1 N N N N N N -21.005 -40.832 -0.084 -4.398 4.946 -0.308 H13 SLH 45
SLH H14 H14 H 0 1 N N N N N N -17.503 -38.910 1.195 -1.228 5.409 2.412 H14 SLH 46
SLH H15 H15 H 0 1 N N N N N N -19.582 -44.079 2.925 -3.592 1.606 -3.484 H15 SLH 47
SLH H16 H16 H 0 1 N N N N N N -20.135 -42.101 3.521 -1.320 3.317 -1.992 H16 SLH 48
SLH H17 H17 H 0 1 N N N N N N -21.608 -41.164 3.096 -2.964 3.881 -2.377 H17 SLH 49
SLH H18 H18 H 0 1 N N N N N N -18.444 -40.290 3.102 -0.456 3.946 0.462 H18 SLH 50
SLH H20 H20 H 0 1 N N N N N N -23.101 -44.044 1.998 -1.193 0.883 -0.958 H20 SLH 51
SLH H22 H22 H 0 1 N N N N N N -23.160 -41.680 3.690 -3.117 -0.514 -0.454 H22 SLH 52
SLH H23 H23 H 0 1 N N N N N N -23.610 -41.669 1.951 -3.516 0.641 0.840 H23 SLH 53
SLH H24 H24 H 0 1 N N N N N N -26.069 -43.562 4.835 -1.790 -2.159 2.601 H24 SLH 54
SLH H25 H25 H 0 1 N N N N N N -24.282 -43.643 4.999 -3.358 -1.352 2.356 H25 SLH 55
SLH H26 H26 H 0 1 N N N N N N -24.199 -41.276 5.577 -3.461 -2.276 0.048 H26 SLH 56
SLH H27 H27 H 0 1 N N N N N N -26.184 -39.119 8.041 -2.904 -6.211 -1.015 H27 SLH 57
SLH H28 H28 H 0 1 N N N N N N -27.442 -40.370 7.760 -2.002 -5.919 0.492 H28 SLH 58
SLH H29 H29 H 0 1 N N N N N N -26.614 -39.385 1.636 1.922 -2.134 0.041 H29 SLH 59
SLH H30 H30 H 0 1 N N N N N N -28.001 -40.424 1.162 1.636 -0.902 -1.211 H30 SLH 60
SLH H31 H31 H 0 1 N N N N N N -26.135 -40.904 -0.837 3.267 -0.504 1.338 H31 SLH 61
SLH H32 H32 H 0 1 N N N N N N -25.905 -39.158 -0.482 2.981 0.728 0.086 H32 SLH 62
SLH H33 H33 H 0 1 N N N N N N -26.572 -41.951 -2.021 6.430 -1.613 -1.741 H33 SLH 63
SLH H34 H34 H 0 1 N N N N N N -27.285 -43.329 -3.946 8.685 -0.704 -1.363 H34 SLH 64
SLH H35 H35 H 0 1 N N N N N N -29.210 -42.638 -5.319 9.035 1.069 0.307 H35 SLH 65
SLH H36 H36 H 0 1 N N N N N N -30.434 -40.555 -4.793 7.131 1.945 1.597 H36 SLH 66
SLH H37 H37 H 0 1 N N N N N N -29.713 -39.190 -2.882 4.871 1.046 1.223 H37 SLH 67
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SLH C22 C21 DOUB Y N 1
SLH C22 C23 SING Y N 2
SLH C21 C20 SING Y N 3
SLH C23 C24 DOUB Y N 4
SLH C20 C19 DOUB Y N 5
SLH C24 C19 SING Y N 6
SLH C19 N4 SING N N 7
SLH N4 C18 SING N N 8
SLH C18 C17 SING N N 9
SLH N2 C14 SING Y N 10
SLH N2 C15 DOUB Y N 11
SLH C14 C13 DOUB Y N 12
SLH O C DOUB N N 13
SLH C17 C SING N N 14
SLH C15 N3 SING Y N 15
SLH C N SING N N 16
SLH O1 C16 DOUB N N 17
SLH C13 N3 SING Y N 18
SLH C13 C12 SING N N 19
SLH C11 C16 SING N N 20
SLH C11 N1 SING N N 21
SLH C11 C12 SING N N 22
SLH N1 C10 SING N N 23
SLH N C9 SING N N 24
SLH N C1 SING N N 25
SLH C10 C9 SING N N 26
SLH C9 C8 SING N N 27
SLH C1 C2 SING N N 28
SLH C8 C7 SING N N 29
SLH C2 C7 SING N N 30
SLH C2 C3 SING N N 31
SLH C7 C6 SING N N 32
SLH C3 C4 SING N N 33
SLH C6 C5 SING N N 34
SLH C4 C5 SING N N 35
SLH C1 H1 SING N N 36
SLH C1 H2 SING N N 37
SLH C2 H3 SING N N 38
SLH C3 H4 SING N N 39
SLH C3 H5 SING N N 40
SLH N4 H6 SING N N 41
SLH C5 H7 SING N N 42
SLH C5 H8 SING N N 43
SLH C6 H9 SING N N 44
SLH C6 H10 SING N N 45
SLH C9 H11 SING N N 46
SLH C11 H12 SING N N 47
SLH C14 H13 SING N N 48
SLH C15 H14 SING N N 49
SLH C16 H15 SING N N 50
SLH C12 H16 SING N N 51
SLH C12 H17 SING N N 52
SLH N3 H18 SING N N 53
SLH N1 H20 SING N N 54
SLH C10 H22 SING N N 55
SLH C10 H23 SING N N 56
SLH C8 H24 SING N N 57
SLH C8 H25 SING N N 58
SLH C7 H26 SING N N 59
SLH C4 H27 SING N N 60
SLH C4 H28 SING N N 61
SLH C17 H29 SING N N 62
SLH C17 H30 SING N N 63
SLH C18 H31 SING N N 64
SLH C18 H32 SING N N 65
SLH C24 H33 SING N N 66
SLH C23 H34 SING N N 67
SLH C22 H35 SING N N 68
SLH C21 H36 SING N N 69
SLH C20 H37 SING N N 70
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SLH SMILES ACDLabs 12.01 'C3C1C(CCCC1)CC(CNC(C=O)Cc2ncnc2)N3C(=O)CCNc4ccccc4'
SLH InChI InChI 1.03 'InChI=1S/C25H35N5O2/c31-17-23(13-22-14-26-18-29-22)28-15-24-12-19-6-4-5-7-20(19)16-30(24)25(32)10-11-27-21-8-2-1-3-9-21/h1-3,8-9,14,17-20,23-24,27-28H,4-7,10-13,15-16H2,(H,26,29)/t19-,20-,23-,24+/m0/s1'
SLH InChIKey InChI 1.03 HCMRRQNNHUOUJM-NVXDSCFRSA-N
SLH SMILES_CANONICAL CACTVS 3.385 'O=C[C@H](Cc1[nH]cnc1)NC[C@H]2C[C@@H]3CCCC[C@H]3CN2C(=O)CCNc4ccccc4'
SLH SMILES CACTVS 3.385 'O=C[CH](Cc1[nH]cnc1)NC[CH]2C[CH]3CCCC[CH]3CN2C(=O)CCNc4ccccc4'
SLH SMILES_CANONICAL 'OpenEye OEToolkits' 1.9.2 'c1ccc(cc1)NCCC(=O)N2C[C@@H]3CCCC[C@H]3C[C@@H]2CN[C@@H](Cc4cnc[nH]4)C=O'
SLH SMILES 'OpenEye OEToolkits' 1.9.2 'c1ccc(cc1)NCCC(=O)N2CC3CCCCC3CC2CNC(Cc4cnc[nH]4)C=O'
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
SLH 'SYSTEMATIC NAME' ACDLabs 12.01 '(2S)-3-(1H-imidazol-5-yl)-2-({[(3R,4aS,8aR)-2-(N-phenyl-beta-alanyl)decahydroisoquinolin-3-yl]methyl}amino)propanal'
SLH 'SYSTEMATIC NAME' 'OpenEye OEToolkits' 1.9.2 '(2S)-2-[[(3R,4aS,8aR)-2-(3-phenylazanylpropanoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-3-yl]methylamino]-3-(1H-imidazol-5-yl)propanal'
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SLH 'Create component' 2015-07-03 PDBJ
SLH 'Initial release' 2016-06-22 RCSB
SLH 'Modify PCM' 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id SLH
_pdbx_chem_comp_pcm.modified_residue_id CYS
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category 'Covalent chemical modification'
_pdbx_chem_comp_pcm.position 'Amino-acid side chain'
_pdbx_chem_comp_pcm.polypeptide_position 'Any position'
_pdbx_chem_comp_pcm.comp_id_linking_atom C16
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
SLH C1 C 6.999 -1.432 1
SLH C2 C 5.700 -0.682 2
SLH C3 C 4.359 -1.484 3
SLH N4 N 10.896 -5.182 4
SLH C5 C 3.000 0.849 5
SLH C6 C 4.359 1.620 6
SLH C9 C 8.298 0.818 7
SLH C11 C 10.896 3.818 8
SLH C13 C 12.195 6.068 9
SLH C14 C 12.352 7.560 10
SLH C15 C 14.569 6.573 11
SLH O1 O 12.195 1.568 12
SLH C16 C 12.195 3.068 13
SLH C12 C 10.896 5.318 14
SLH N3 N 13.566 5.458 15
SLH N2 N 13.819 7.872 16
SLH N1 N 9.597 3.068 17
SLH C10 C 9.597 1.568 18
SLH C8 C 6.999 1.568 19
SLH C7 C 5.700 0.818 20
SLH C4 C 3.000 -0.713 21
SLH N N 8.298 -0.682 22
SLH C C 9.597 -1.432 23
SLH O O 10.896 -0.682 24
SLH C17 C 9.597 -2.932 25
SLH C18 C 10.896 -3.682 26
SLH C19 C 12.195 -5.932 27
SLH C24 C 12.195 -7.432 28
SLH C23 C 13.494 -8.182 29
SLH C22 C 14.793 -7.432 30
SLH C21 C 14.793 -5.932 31
SLH C20 C 13.494 -5.182 32
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
SLH C22 C21 DOUBLE NONE 1
SLH C22 C23 SINGLE NONE 2
SLH C21 C20 SINGLE NONE 3
SLH C23 C24 DOUBLE NONE 4
SLH C20 C19 DOUBLE NONE 5
SLH C24 C19 SINGLE NONE 6
SLH C19 N4 SINGLE NONE 7
SLH N4 C18 SINGLE NONE 8
SLH C18 C17 SINGLE NONE 9
SLH N2 C14 SINGLE NONE 10
SLH N2 C15 DOUBLE NONE 11
SLH C14 C13 DOUBLE NONE 12
SLH O C DOUBLE NONE 13
SLH C17 C SINGLE NONE 14
SLH C15 N3 SINGLE NONE 15
SLH C N SINGLE NONE 16
SLH O1 C16 DOUBLE NONE 17
SLH C13 N3 SINGLE NONE 18
SLH C13 C12 SINGLE NONE 19
SLH C11 C16 SINGLE NONE 20
SLH C11 N1 SINGLE NONE 21
SLH C11 C12 SINGLE BEGINWEDGE 22
SLH N1 C10 SINGLE NONE 23
SLH N C9 SINGLE NONE 24
SLH N C1 SINGLE NONE 25
SLH C9 C10 SINGLE BEGINDASH 26
SLH C9 C8 SINGLE NONE 27
SLH C1 C2 SINGLE NONE 28
SLH C8 C7 SINGLE NONE 29
SLH C2 C7 SINGLE NONE 30
SLH C2 C3 SINGLE NONE 31
SLH C7 C6 SINGLE NONE 32
SLH C3 C4 SINGLE NONE 33
SLH C6 C5 SINGLE NONE 34
SLH C4 C5 SINGLE NONE 35
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
SLH MurckoScaffold S1 scaffold 'O=C(CCNc1ccccc1)N1C[C@@H]2CCCC[C@H]2C[C@@H]1CNCCc1cnc[nH]1' InChI=1S/C24H35N5O/c30-24(11-13-27-21-8-2-1-3-9-21)29-17-20-7-5-4-6-19(20)14-23(29)16-25-12-10-22-15-26-18-28-22/h1-3,8-9,15,18-20,23,25,27H,4-7,10-14,16-17H2,(H,26,28)/t19-,20-,23+/m0/s1 WXMYEBYJSILYNY-SXWKCWPCSA-N
SLH amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
SLH cyclohexane F2 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
SLH imidazole F3 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
SLH peptide F4 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
SLH phenyl F5 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
SLH Z2856434901 F6 fragment CNCCC1CCCCC1 InChI=1S/C9H19N/c1-10-8-7-9-5-3-2-4-6-9/h9-10H,2-8H2,1H3 KCYFTGSOYOWCJF-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
SLH C1 S1 1
SLH C2 S1 1
SLH C3 S1 1
SLH N4 S1 1
SLH C5 S1 1
SLH C6 S1 1
SLH C9 S1 1
SLH C11 S1 1
SLH C13 S1 1
SLH C14 S1 1
SLH C15 S1 1
SLH C12 S1 1
SLH N3 S1 1
SLH N2 S1 1
SLH N1 S1 1
SLH C10 S1 1
SLH C8 S1 1
SLH C7 S1 1
SLH C4 S1 1
SLH N S1 1
SLH C S1 1
SLH O S1 1
SLH C17 S1 1
SLH C18 S1 1
SLH C19 S1 1
SLH C24 S1 1
SLH C23 S1 1
SLH C22 S1 1
SLH C21 S1 1
SLH C20 S1 1
SLH N F1 1
SLH C F1 1
SLH O F1 1
SLH C17 F1 1
SLH C2 F2 1
SLH C7 F2 1
SLH C6 F2 1
SLH C5 F2 1
SLH C4 F2 1
SLH C3 F2 1
SLH C13 F3 1
SLH C14 F3 1
SLH N2 F3 1
SLH C15 F3 1
SLH N3 F3 1
SLH O1 F4 1
SLH C16 F4 1
SLH C11 F4 1
SLH N1 F4 1
SLH C19 F5 1
SLH C20 F5 1
SLH C21 F5 1
SLH C22 F5 1
SLH C23 F5 1
SLH C24 F5 1
SLH C1 F6 1
SLH N F6 1
SLH C9 F6 1
SLH C8 F6 1
SLH C7 F6 1
SLH C2 F6 1
SLH C3 F6 1
SLH C4 F6 1
SLH C5 F6 1
SLH C6 F6 1
SLH C F6 2
SLH N F6 2
SLH C9 F6 2
SLH C8 F6 2
SLH C7 F6 2
SLH C2 F6 2
SLH C3 F6 2
SLH C4 F6 2
SLH C5 F6 2
SLH C6 F6 2
#
_pdbe_chem_comp_rdkit_properties.comp_id SLH
_pdbe_chem_comp_rdkit_properties.exactmw 437.279
_pdbe_chem_comp_rdkit_properties.amw 437.588
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 10
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 32
_pdbe_chem_comp_rdkit_properties.NumAtoms 67
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.560
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 239.275
_pdbe_chem_comp_rdkit_properties.tpsa 90.120
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.583
_pdbe_chem_comp_rdkit_properties.CrippenMR 124.171
_pdbe_chem_comp_rdkit_properties.chi0v 15.553
_pdbe_chem_comp_rdkit_properties.chi1v 8.368
_pdbe_chem_comp_rdkit_properties.chi2v 3.379
_pdbe_chem_comp_rdkit_properties.chi3v 3.379
_pdbe_chem_comp_rdkit_properties.chi4v 2.080
_pdbe_chem_comp_rdkit_properties.chi0n 50.553
_pdbe_chem_comp_rdkit_properties.chi1n 25.710
_pdbe_chem_comp_rdkit_properties.chi2n 3.379
_pdbe_chem_comp_rdkit_properties.chi3n 3.379
_pdbe_chem_comp_rdkit_properties.chi4n 2.080
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.670
_pdbe_chem_comp_rdkit_properties.kappa1 5.193
_pdbe_chem_comp_rdkit_properties.kappa2 11.271
_pdbe_chem_comp_rdkit_properties.kappa3 5.971
_pdbe_chem_comp_rdkit_properties.Phi 1.829
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
SLH UniChem ZINC ZINC000584905671
SLH UniChem PubChem 137350012
SLH UniChem BRENDA 235746
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
SLH C1 1.177 -3.309 -0.180 ETKDGv3 1
SLH C2 -0.115 -4.082 -0.443 ETKDGv3 2
SLH C3 0.147 -5.430 -1.137 ETKDGv3 3
SLH N4 2.982 0.614 0.213 ETKDGv3 4
SLH C5 -2.165 -5.308 -2.179 ETKDGv3 5
SLH C6 -2.389 -3.941 -1.514 ETKDGv3 6
SLH C9 -0.454 -1.469 0.583 ETKDGv3 7
SLH C11 -1.485 2.190 0.645 ETKDGv3 8
SLH C13 -2.703 4.283 -0.001 ETKDGv3 9
SLH C14 -2.957 5.285 0.825 ETKDGv3 10
SLH C15 -2.113 6.198 -0.949 ETKDGv3 11
SLH O1 -1.501 2.645 2.984 ETKDGv3 12
SLH C16 -0.914 2.771 1.920 ETKDGv3 13
SLH C12 -2.846 2.821 0.309 ETKDGv3 14
SLH N3 -2.138 4.798 -1.194 ETKDGv3 15
SLH N2 -2.584 6.519 0.214 ETKDGv3 16
SLH N1 -1.628 0.725 0.734 ETKDGv3 17
SLH C10 -0.316 0.062 0.742 ETKDGv3 18
SLH C8 -1.231 -1.783 -0.731 ETKDGv3 19
SLH C7 -1.047 -3.214 -1.303 ETKDGv3 20
SLH C4 -1.177 -6.171 -1.379 ETKDGv3 21
SLH N 0.884 -2.114 0.624 ETKDGv3 22
SLH C 1.796 -1.796 1.692 ETKDGv3 23
SLH O 1.365 -1.687 2.872 ETKDGv3 24
SLH C17 3.251 -1.536 1.416 ETKDGv3 25
SLH C18 3.541 -0.029 1.405 ETKDGv3 26
SLH C19 2.748 2.033 0.122 ETKDGv3 27
SLH C24 3.230 2.971 1.174 ETKDGv3 28
SLH C23 2.944 4.277 1.097 ETKDGv3 29
SLH C22 2.156 4.799 -0.037 ETKDGv3 30
SLH C21 1.740 3.968 -0.999 ETKDGv3 31
SLH C20 2.055 2.527 -0.920 ETKDGv3 32
SLH H1 1.661 -3.004 -1.133 ETKDGv3 33
SLH H2 1.881 -3.976 0.367 ETKDGv3 34
SLH H3 -0.601 -4.289 0.539 ETKDGv3 35
SLH H4 0.799 -6.062 -0.495 ETKDGv3 36
SLH H5 0.668 -5.270 -2.106 ETKDGv3 37
SLH H6 2.686 0.010 -0.588 ETKDGv3 38
SLH H7 -3.137 -5.842 -2.256 ETKDGv3 39
SLH H8 -1.775 -5.161 -3.210 ETKDGv3 40
SLH H9 -3.047 -3.329 -2.169 ETKDGv3 41
SLH H10 -2.905 -4.080 -0.538 ETKDGv3 42
SLH H11 -1.050 -1.858 1.438 ETKDGv3 43
SLH H12 -0.795 2.440 -0.192 ETKDGv3 44
SLH H13 -3.350 5.193 1.829 ETKDGv3 45
SLH H14 -1.736 6.926 -1.655 ETKDGv3 46
SLH H15 0.030 3.305 1.891 ETKDGv3 47
SLH H16 -3.561 2.671 1.147 ETKDGv3 48
SLH H17 -3.269 2.318 -0.587 ETKDGv3 49
SLH H18 -1.773 4.277 -2.021 ETKDGv3 50
SLH H20 -2.139 0.472 1.613 ETKDGv3 51
SLH H22 0.212 0.306 1.689 ETKDGv3 52
SLH H23 0.299 0.434 -0.103 ETKDGv3 53
SLH H24 -2.309 -1.573 -0.552 ETKDGv3 54
SLH H25 -0.911 -1.066 -1.521 ETKDGv3 55
SLH H26 -0.576 -3.102 -2.308 ETKDGv3 56
SLH H27 -1.633 -6.446 -0.402 ETKDGv3 57
SLH H28 -0.975 -7.110 -1.937 ETKDGv3 58
SLH H29 3.856 -2.014 2.216 ETKDGv3 59
SLH H30 3.559 -1.990 0.450 ETKDGv3 60
SLH H31 3.106 0.422 2.324 ETKDGv3 61
SLH H32 4.639 0.136 1.421 ETKDGv3 62
SLH H33 3.823 2.615 2.006 ETKDGv3 63
SLH H34 3.294 4.956 1.863 ETKDGv3 64
SLH H35 1.919 5.853 -0.090 ETKDGv3 65
SLH H36 1.161 4.348 -1.831 ETKDGv3 66
SLH H37 1.691 1.870 -1.701 ETKDGv3 67
#