data_S7Y
#
_chem_comp.id S7Y
_chem_comp.name alosetron
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C17 H18 N4 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms 5-methyl-2-[(4-methyl-1~{H}-imidazol-5-yl)methyl]-3,4-dihydropyrido[4,3-b]indol-1-one
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-03-05
_chem_comp.pdbx_modified_date 2021-03-13
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 294.351
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code S7Y
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6W1J
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
S7Y N N1 N 0 1 N N N N N N 102.505 118.106 93.027 1.184 0.268 1.201 N S7Y 1
S7Y C C1 C 0 1 Y N N N N N 99.939 119.278 93.182 -1.153 1.289 0.036 C S7Y 2
S7Y O O1 O 0 1 N N N N N N 103.305 120.011 94.091 0.404 -1.813 0.891 O S7Y 3
S7Y C1 C2 C 0 1 N N N N N N 100.058 117.863 92.666 0.032 2.214 0.169 C1 S7Y 4
S7Y C10 C3 C 0 1 Y N N N N N 98.445 122.308 94.368 -4.508 0.191 -0.659 C10 S7Y 5
S7Y C11 C4 C 0 1 Y N N N N N 103.984 116.355 92.670 3.403 -0.123 0.299 C11 S7Y 6
S7Y C12 C5 C 0 1 Y N N N N N 100.446 123.563 94.687 -4.178 -2.134 -0.058 C12 S7Y 7
S7Y C13 C6 C 0 1 Y N N N N N 99.074 123.469 94.739 -4.983 -1.101 -0.508 C13 S7Y 8
S7Y C14 C7 C 0 1 Y N N N N N 104.186 115.598 93.800 3.432 -0.963 -0.753 C14 S7Y 9
S7Y C15 C8 C 0 1 N N N N N N 104.102 116.064 95.232 2.582 -2.196 -0.926 C15 S7Y 10
S7Y C16 C9 C 0 1 Y N N N N N 104.453 114.353 92.112 4.896 0.573 -1.141 C16 S7Y 11
S7Y C2 C10 C 0 1 Y N N N N N 101.007 120.008 93.378 -1.047 -0.048 0.357 C2 S7Y 12
S7Y C3 C11 C 0 1 N N N N N N 101.515 117.554 92.188 0.937 1.701 1.290 C3 S7Y 13
S7Y C4 C12 C 0 1 Y N N N N N 100.551 121.297 93.867 -2.348 -0.640 0.124 C4 S7Y 14
S7Y C5 C13 C 0 1 Y N N N N N 99.220 121.207 93.923 -3.172 0.419 -0.337 C5 S7Y 15
S7Y C6 C14 C 0 1 N N N N N N 102.407 119.503 93.088 0.224 -0.611 0.832 C6 S7Y 16
S7Y C7 C15 C 0 1 N N N N N N 103.636 117.837 92.585 2.522 -0.238 1.517 C7 S7Y 17
S7Y C8 C16 C 0 1 N N N N N N 97.478 119.567 93.450 -2.890 2.874 -0.798 C8 S7Y 18
S7Y C9 C17 C 0 1 Y N N N N N 101.197 122.491 94.253 -2.848 -1.935 0.268 C9 S7Y 19
S7Y N1 N2 N 0 1 Y N N N N N 98.848 120.014 93.520 -2.409 1.557 -0.374 N1 S7Y 20
S7Y N2 N3 N 0 1 Y N N N N N 104.162 115.546 91.653 4.332 0.851 0.054 N2 S7Y 21
S7Y N3 N4 N 0 1 Y N N N N N 104.470 114.378 93.419 4.349 -0.511 -1.620 N3 S7Y 22
S7Y H3 H3 H 0 1 N N N N N N 99.368 117.731 91.820 0.588 2.232 -0.769 H3 S7Y 23
S7Y H4 H4 H 0 1 N N N N N N 99.789 117.164 93.472 -0.314 3.219 0.407 H4 S7Y 24
S7Y H5 H5 H 0 1 N N N N N N 97.369 122.233 94.414 -5.146 0.988 -1.011 H5 S7Y 25
S7Y H6 H6 H 0 1 N N N N N N 100.935 124.478 94.987 -4.600 -3.123 0.040 H6 S7Y 26
S7Y H7 H7 H 0 1 N N N N N N 98.490 124.313 95.074 -6.014 -1.309 -0.749 H7 S7Y 27
S7Y H8 H8 H 0 1 N N N N N N 104.316 115.221 95.906 1.617 -1.916 -1.349 H8 S7Y 28
S7Y H9 H9 H 0 1 N N N N N N 104.838 116.864 95.401 3.085 -2.892 -1.597 H9 S7Y 29
S7Y H10 H10 H 0 1 N N N N N N 103.091 116.447 95.434 2.429 -2.671 0.043 H10 S7Y 30
S7Y H11 H11 H 0 1 N N N N N N 104.649 113.483 91.503 5.667 1.156 -1.624 H11 S7Y 31
S7Y H12 H12 H 0 1 N N N N N N 101.649 116.463 92.160 0.466 1.919 2.249 H12 S7Y 32
S7Y H13 H13 H 0 1 N N N N N N 101.645 117.965 91.176 1.890 2.227 1.241 H13 S7Y 33
S7Y H15 H15 H 0 1 N N N N N N 104.380 118.403 93.164 2.949 0.347 2.331 H15 S7Y 34
S7Y H16 H16 H 0 1 N N N N N N 103.680 118.145 91.530 2.453 -1.284 1.818 H16 S7Y 35
S7Y H17 H17 H 0 1 N N N N N N 96.811 120.375 93.786 -2.739 2.988 -1.872 H17 S7Y 36
S7Y H18 H18 H 0 1 N N N N N N 97.233 119.297 92.412 -3.952 2.964 -0.569 H18 S7Y 37
S7Y H19 H19 H 0 1 N N N N N N 97.345 118.689 94.099 -2.337 3.650 -0.269 H19 S7Y 38
S7Y H20 H20 H 0 1 N N N N N N 102.274 122.565 94.209 -2.226 -2.745 0.619 H20 S7Y 39
S7Y H21 H21 H 0 1 N N N N N N 104.088 115.797 90.688 4.547 1.600 0.632 H21 S7Y 40
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
S7Y N2 C16 SING Y N 1
S7Y N2 C11 SING Y N 2
S7Y C16 N3 DOUB Y N 3
S7Y C3 C1 SING N N 4
S7Y C3 N SING N N 5
S7Y C7 C11 SING N N 6
S7Y C7 N SING N N 7
S7Y C1 C SING N N 8
S7Y C11 C14 DOUB Y N 9
S7Y N C6 SING N N 10
S7Y C6 C2 SING N N 11
S7Y C6 O DOUB N N 12
S7Y C C2 DOUB Y N 13
S7Y C N1 SING Y N 14
S7Y C2 C4 SING Y N 15
S7Y N3 C14 SING Y N 16
S7Y C8 N1 SING N N 17
S7Y N1 C5 SING Y N 18
S7Y C14 C15 SING N N 19
S7Y C4 C5 DOUB Y N 20
S7Y C4 C9 SING Y N 21
S7Y C5 C10 SING Y N 22
S7Y C9 C12 DOUB Y N 23
S7Y C10 C13 DOUB Y N 24
S7Y C12 C13 SING Y N 25
S7Y C1 H3 SING N N 26
S7Y C1 H4 SING N N 27
S7Y C10 H5 SING N N 28
S7Y C12 H6 SING N N 29
S7Y C13 H7 SING N N 30
S7Y C15 H8 SING N N 31
S7Y C15 H9 SING N N 32
S7Y C15 H10 SING N N 33
S7Y C16 H11 SING N N 34
S7Y C3 H12 SING N N 35
S7Y C3 H13 SING N N 36
S7Y C7 H15 SING N N 37
S7Y C7 H16 SING N N 38
S7Y C8 H17 SING N N 39
S7Y C8 H18 SING N N 40
S7Y C8 H19 SING N N 41
S7Y C9 H20 SING N N 42
S7Y N2 H21 SING N N 43
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
S7Y InChI InChI 1.03 InChI=1S/C17H18N4O/c1-11-13(19-10-18-11)9-21-8-7-15-16(17(21)22)12-5-3-4-6-14(12)20(15)2/h3-6,10H,7-9H2,1-2H3,(H,18,19)
S7Y InChIKey InChI 1.03 JSWZEAMFRNKZNL-UHFFFAOYSA-N
S7Y SMILES_CANONICAL CACTVS 3.385 Cn1c2CCN(Cc3[nH]cnc3C)C(=O)c2c4ccccc14
S7Y SMILES CACTVS 3.385 Cn1c2CCN(Cc3[nH]cnc3C)C(=O)c2c4ccccc14
S7Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 Cc1c([nH]cn1)CN2CCc3c(c4ccccc4n3C)C2=O
S7Y SMILES "OpenEye OEToolkits" 2.0.7 Cc1c([nH]cn1)CN2CCc3c(c4ccccc4n3C)C2=O
#
_pdbx_chem_comp_identifier.comp_id S7Y
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
5-methyl-2-[(4-methyl-1~{H}-imidazol-5-yl)methyl]-3,4-dihydropyrido[4,3-b]indol-1-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
S7Y 'Create component' 2020-03-05 RCSB
S7Y 'Initial release' 2021-01-13 RCSB
S7Y 'Modify synonyms' 2021-03-13 RCSB
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id S7Y
_pdbx_chem_comp_synonyms.name 5-methyl-2-[(4-methyl-1~{H}-imidazol-5-yl)methyl]-3,4-dihydropyrido[4,3-b]indol-1-one
_pdbx_chem_comp_synonyms.provenance PDB
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_details.comp_id S7Y
_pdbe_chem_comp_drugbank_details.drugbank_id DB00969
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Alosetron
_pdbe_chem_comp_drugbank_details.description
'Alosetron is a 5-HT3 antagonist used only for the management of severe diarrhoea-predominant irritable bowel syndrome (IBS) in women. Alosetron has an antagonist action on the 5-HT3 receptors and thus may modulate serotonin-sensitive gastrointestinal (GI) processes. Alosetron was voluntarily withdrawn from the US market in November 2000 by the manufacturer due to numerous reports of severe adverse effects including ischemic colitis, severely obstructed or ruptured bowel, and death. In June 2002, the FDA approved a supplemental new drug application allowing the remarketing of the drug under restricted conditions of use.'
_pdbe_chem_comp_drugbank_details.cas_number 122852-42-0
_pdbe_chem_comp_drugbank_details.mechanism_of_action
'Alosetron is a potent and selective 5-HT<sub>3</sub> receptor antagonist. 5-HT<sub>3</sub> receptors are nonselective cation channels that are extensively distributed on enteric neurons in the human gastrointestinal tract, as well as other peripheral and central locations. Activation of these channels and the resulting neuronal depolarization affect the regulation of visceral pain, colonic transit and gastrointestinal secretions, processes that relate to the pathophysiology of irritable bowel syndrome (IBS). 5-HT<sub>3</sub> receptor antagonists such as alosetron inhibit activation of non-selective cation channels which results in the modulation of serotonin-sensitive GI motor and sensory processes.'
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
S7Y '5-methyl-2-[(4-methyl-1~{H}-imidazol-5-yl)methyl]-3,4-dihydropyrido[4,3-b]indol-1-one' wwPDB ?
S7Y 2,3,4,5-Tetrahydro-5-methyl-2-((5-methyl-1H-imidazol-4-yl)methyl)-1H-pyrido(4,3-b)indol-1-one DrugBank ?
S7Y Alosetron DrugBank ?
#
_pdbe_chem_comp_drugbank_classification.comp_id S7Y
_pdbe_chem_comp_drugbank_classification.drugbank_id DB00969
_pdbe_chem_comp_drugbank_classification.parent N-alkylindoles
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Indoles and derivatives'
_pdbe_chem_comp_drugbank_classification.superclass 'Organoheterocyclic compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as n-alkylindoles. These are compounds containing an indole moiety that carries an alkyl chain at the 1-position.'
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
S7Y DB00969 '5-hydroxytryptamine receptor 3A' Humans P46098 yes 1
S7Y DB00969 '5-hydroxytryptamine receptor 3B' Humans O95264 yes 2
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
S7Y N N 10.099 -0.680 1
S7Y C C 8.005 1.610 2
S7Y O O 8.088 -2.414 3
S7Y C1 C 9.528 1.959 4
S7Y C10 C 4.054 1.959 5
S7Y C11 C 12.567 -1.493 6
S7Y C12 C 3.483 -0.680 7
S7Y C13 C 3.000 0.806 8
S7Y C14 C 13.678 -2.501 9
S7Y C15 C 13.515 -3.992 10
S7Y C16 C 14.674 -0.287 11
S7Y C2 C 7.541 0.184 12
S7Y C3 C 10.582 0.806 13
S7Y C4 C 6.041 0.184 14
S7Y C5 C 5.577 1.610 15
S7Y C6 C 8.569 -0.993 16
S7Y C7 C 11.099 -1.799 17
S7Y C8 C 6.791 3.992 18
S7Y C9 C 5.014 -0.993 19
S7Y N1 N 6.791 2.492 20
S7Y N2 N 13.182 -0.125 21
S7Y N3 N 14.980 -1.756 22
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
S7Y N2 C16 SINGLE NONE 1
S7Y N2 C11 SINGLE NONE 2
S7Y C16 N3 DOUBLE NONE 3
S7Y C3 C1 SINGLE NONE 4
S7Y C3 N SINGLE NONE 5
S7Y C7 C11 SINGLE NONE 6
S7Y C7 N SINGLE NONE 7
S7Y C1 C SINGLE NONE 8
S7Y C11 C14 DOUBLE NONE 9
S7Y N C6 SINGLE NONE 10
S7Y C6 C2 SINGLE NONE 11
S7Y C6 O DOUBLE NONE 12
S7Y C C2 DOUBLE NONE 13
S7Y C N1 SINGLE NONE 14
S7Y C2 C4 SINGLE NONE 15
S7Y N3 C14 SINGLE NONE 16
S7Y C8 N1 SINGLE NONE 17
S7Y N1 C5 SINGLE NONE 18
S7Y C14 C15 SINGLE NONE 19
S7Y C4 C5 DOUBLE NONE 20
S7Y C4 C9 SINGLE NONE 21
S7Y C5 C10 SINGLE NONE 22
S7Y C9 C12 DOUBLE NONE 23
S7Y C10 C13 DOUBLE NONE 24
S7Y C12 C13 SINGLE NONE 25
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
S7Y MurckoScaffold S1 scaffold 'O=C1c2c([nH]c3ccccc23)CCN1Cc1cnc[nH]1' InChI=1S/C15H14N4O/c20-15-14-11-3-1-2-4-12(11)18-13(14)5-6-19(15)8-10-7-16-9-17-10/h1-4,7,9,18H,5-6,8H2,(H,16,17) LQQZMNIWUOLUCJ-UHFFFAOYSA-N
S7Y amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
S7Y imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
S7Y indole F3 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
S7Y phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
S7Y pyrrole F5 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
S7Y N S1 1
S7Y C S1 1
S7Y O S1 1
S7Y C1 S1 1
S7Y C10 S1 1
S7Y C11 S1 1
S7Y C12 S1 1
S7Y C13 S1 1
S7Y C14 S1 1
S7Y C16 S1 1
S7Y C2 S1 1
S7Y C3 S1 1
S7Y C4 S1 1
S7Y C5 S1 1
S7Y C6 S1 1
S7Y C7 S1 1
S7Y C9 S1 1
S7Y N1 S1 1
S7Y N2 S1 1
S7Y N3 S1 1
S7Y N F1 1
S7Y C6 F1 1
S7Y O F1 1
S7Y C2 F1 1
S7Y C11 F2 1
S7Y C14 F2 1
S7Y N3 F2 1
S7Y C16 F2 1
S7Y N2 F2 1
S7Y C5 F3 1
S7Y C4 F3 1
S7Y C2 F3 1
S7Y C F3 1
S7Y N1 F3 1
S7Y C9 F3 1
S7Y C12 F3 1
S7Y C13 F3 1
S7Y C10 F3 1
S7Y C10 F4 1
S7Y C5 F4 1
S7Y C4 F4 1
S7Y C9 F4 1
S7Y C12 F4 1
S7Y C13 F4 1
S7Y C F5 1
S7Y C2 F5 1
S7Y C4 F5 1
S7Y C5 F5 1
S7Y N1 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id S7Y
_pdbe_chem_comp_rdkit_properties.exactmw 294.148
_pdbe_chem_comp_rdkit_properties.amw 294.358
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 22
_pdbe_chem_comp_rdkit_properties.NumAtoms 40
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 5
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.294
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 153.471
_pdbe_chem_comp_rdkit_properties.tpsa 53.920
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.761
_pdbe_chem_comp_rdkit_properties.CrippenMR 81.418
_pdbe_chem_comp_rdkit_properties.chi0v 10.697
_pdbe_chem_comp_rdkit_properties.chi1v 5.940
_pdbe_chem_comp_rdkit_properties.chi2v 3.070
_pdbe_chem_comp_rdkit_properties.chi3v 3.070
_pdbe_chem_comp_rdkit_properties.chi4v 2.088
_pdbe_chem_comp_rdkit_properties.chi0n 28.697
_pdbe_chem_comp_rdkit_properties.chi1n 14.887
_pdbe_chem_comp_rdkit_properties.chi2n 3.070
_pdbe_chem_comp_rdkit_properties.chi3n 3.070
_pdbe_chem_comp_rdkit_properties.chi4n 2.088
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.560
_pdbe_chem_comp_rdkit_properties.kappa1 4.042
_pdbe_chem_comp_rdkit_properties.kappa2 4.729
_pdbe_chem_comp_rdkit_properties.kappa3 1.781
_pdbe_chem_comp_rdkit_properties.Phi 0.869
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
S7Y UniChem DrugBank DB00969
S7Y UniChem 'Guide to Pharmacology' 2296
S7Y UniChem ChEBI 253342
S7Y UniChem ZINC ZINC000013537284
S7Y UniChem fdasrs 13Z9HTH115
S7Y UniChem PharmGKB PA164745502
S7Y UniChem HMDB HMDB0015104
S7Y UniChem LINCS LSM-5576
S7Y UniChem ACTor 122852-42-0
S7Y UniChem 'EPA CompTox Dashboard' DTXSID6044278
S7Y UniChem DrugCentral 129
S7Y UniChem ChemicalBook CB8149787
S7Y UniChem DailyMed ALOSETRON
S7Y UniChem ClinicalTrials ALOSETRON
S7Y UniChem ClinicalTrials 'ALOSETRON HYDROCHLORIDE'
S7Y UniChem ClinicalTrials LOTRONEX
S7Y UniChem rxnorm ALOSETRON
S7Y UniChem rxnorm 'ALOSETRON HYDROCHLORIDE'
S7Y UniChem rxnorm LOTRONEX
S7Y UniChem MedChemExpress HY-70050A
S7Y UniChem 'Probes And Drugs' PD009613
S7Y UniChem BindingDb 93624
S7Y UniChem eMolecules 30151833
S7Y UniChem eMolecules 36366898
S7Y UniChem SureChEMBL SCHEMBL631
S7Y UniChem 'PubChem TPHARMA' 14922649
S7Y UniChem PubChem 2099
S7Y UniChem Nikkaji J532.750D
S7Y UniChem BindingDb 50014558
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
S7Y N -1.277 0.342 -0.737 ETKDGv3 1
S7Y C 1.441 1.014 -0.267 ETKDGv3 2
S7Y O -0.551 -1.899 -0.809 ETKDGv3 3
S7Y C1 0.464 2.125 -0.550 ETKDGv3 4
S7Y C10 4.663 -0.660 0.392 ETKDGv3 5
S7Y C11 -3.486 -0.614 -0.327 ETKDGv3 6
S7Y C12 3.752 -2.948 0.293 ETKDGv3 7
S7Y C13 4.874 -1.985 0.494 ETKDGv3 8
S7Y C14 -4.236 -0.029 0.603 ETKDGv3 9
S7Y C15 -4.362 1.438 0.861 ETKDGv3 10
S7Y C16 -4.483 -2.156 0.927 ETKDGv3 11
S7Y C2 1.100 -0.266 -0.333 ETKDGv3 12
S7Y C3 -0.974 1.685 -0.201 ETKDGv3 13
S7Y C4 2.307 -1.049 -0.102 ETKDGv3 14
S7Y C5 3.300 -0.191 0.075 ETKDGv3 15
S7Y C6 -0.271 -0.684 -0.625 ETKDGv3 16
S7Y C7 -2.587 0.051 -1.330 ETKDGv3 17
S7Y C8 3.530 2.348 0.439 ETKDGv3 18
S7Y C9 2.515 -2.504 0.009 ETKDGv3 19
S7Y N1 2.850 1.158 -0.059 ETKDGv3 20
S7Y N2 -3.600 -2.019 -0.179 ETKDGv3 21
S7Y N3 -4.871 -1.020 1.411 ETKDGv3 22
S7Y H3 0.521 2.384 -1.629 ETKDGv3 23
S7Y H4 0.725 3.024 0.046 ETKDGv3 24
S7Y H5 5.475 0.039 0.540 ETKDGv3 25
S7Y H6 3.937 -4.010 0.382 ETKDGv3 26
S7Y H7 5.863 -2.358 0.724 ETKDGv3 27
S7Y H8 -5.266 1.632 1.476 ETKDGv3 28
S7Y H9 -4.462 1.998 -0.092 ETKDGv3 29
S7Y H10 -3.473 1.799 1.416 ETKDGv3 30
S7Y H11 -4.799 -3.109 1.330 ETKDGv3 31
S7Y H12 -1.690 2.441 -0.587 ETKDGv3 32
S7Y H13 -1.074 1.654 0.905 ETKDGv3 33
S7Y H15 -3.063 0.980 -1.708 ETKDGv3 34
S7Y H16 -2.460 -0.613 -2.212 ETKDGv3 35
S7Y H17 3.138 3.252 -0.072 ETKDGv3 36
S7Y H18 3.366 2.441 1.533 ETKDGv3 37
S7Y H19 4.618 2.280 0.233 ETKDGv3 38
S7Y H20 1.697 -3.198 -0.129 ETKDGv3 39
S7Y H21 -3.151 -2.774 -0.743 ETKDGv3 40
#