data_S1E # _chem_comp.id S1E _chem_comp.name 'N,N-dibenzyl-1-hydroxy-1,3-dihydrobenzo[c][1,2]oxaborole-6-carboxamide' _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula 'C22 H20 B N O3' _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms '1-oxidanyl-N,N-bis(phenylmethyl)-3H-2,1-benzoxaborole-6-carboxamide' _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-11-05 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 357.210 _chem_comp.one_letter_code ? _chem_comp.three_letter_code S1E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7AU9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal S1E O O1 O 0 1 N N N N N N -7.706 41.257 -18.671 0.189 -0.942 -2.220 O S1E 1 S1E C C1 C 0 1 N N N N N N -7.355 41.071 -17.516 0.166 -0.262 -1.213 C S1E 2 S1E N N1 N 0 1 N N N N N N -8.061 41.553 -16.453 -1.006 -0.008 -0.598 N S1E 3 S1E C15 C2 C 0 1 N N N N N N -9.163 42.505 -16.666 -1.054 0.923 0.532 C15 S1E 4 S1E C16 C3 C 0 1 Y N N N N N -10.538 41.910 -16.866 -2.232 1.849 0.370 C16 S1E 5 S1E C21 C4 C 0 1 Y N N N N N -10.721 40.785 -17.656 -2.124 2.972 -0.431 C21 S1E 6 S1E C20 C5 C 0 1 Y N N N N N -11.986 40.430 -18.107 -3.204 3.822 -0.579 C20 S1E 7 S1E C19 C6 C 0 1 Y N N N N N -13.093 41.169 -17.733 -4.392 3.549 0.072 C19 S1E 8 S1E C18 C7 C 0 1 Y N N N N N -12.935 42.246 -16.888 -4.501 2.427 0.872 C18 S1E 9 S1E C17 C8 C 0 1 Y N N N N N -11.666 42.611 -16.452 -3.422 1.574 1.016 C17 S1E 10 S1E C8 C9 C 0 1 N N N N N N -7.885 41.148 -15.050 -2.233 -0.664 -1.059 C8 S1E 11 S1E C9 C10 C 0 1 Y N N N N N -7.450 42.248 -14.105 -2.415 -1.964 -0.320 C9 S1E 12 S1E C14 C11 C 0 1 Y N N N N N -6.327 43.030 -14.374 -1.870 -3.130 -0.827 C14 S1E 13 S1E C13 C12 C 0 1 Y N N N N N -5.797 43.872 -13.406 -2.038 -4.323 -0.149 C13 S1E 14 S1E C12 C13 C 0 1 Y N N N N N -6.404 43.980 -12.178 -2.750 -4.351 1.035 C12 S1E 15 S1E C11 C14 C 0 1 Y N N N N N -7.559 43.258 -11.918 -3.294 -3.185 1.542 C11 S1E 16 S1E C10 C15 C 0 1 Y N N N N N -8.078 42.400 -12.875 -3.123 -1.992 0.867 C10 S1E 17 S1E C1 C16 C 0 1 Y N N N N N -6.174 40.181 -17.281 1.424 0.282 -0.660 C1 S1E 18 S1E C4 C17 C 0 1 Y N N N N N -5.172 40.489 -16.355 1.499 1.624 -0.276 C4 S1E 19 S1E C5 C18 C 0 1 Y N N N N N -4.079 39.657 -16.197 2.673 2.134 0.242 C5 S1E 20 S1E C6 C19 C 0 1 Y N N N N N -3.963 38.519 -16.978 3.782 1.323 0.384 C6 S1E 21 S1E C7 C20 C 0 1 N N N N N N -2.865 37.498 -16.913 5.170 1.588 0.904 C7 S1E 22 S1E O1 O2 O 0 1 N N N N N N -3.300 36.432 -17.691 5.939 0.389 0.831 O1 S1E 23 S1E B B1 B 0 1 N N N N N N -4.582 36.703 -18.428 5.127 -0.644 0.292 B S1E 24 S1E C3 C21 C 0 1 Y N N N N N -4.935 38.192 -17.941 3.716 -0.018 0.003 C3 S1E 25 S1E C2 C22 C 0 1 Y N N N N N -6.038 39.037 -18.063 2.539 -0.542 -0.513 C2 S1E 26 S1E H1 H1 H 0 1 N N N N N N -8.923 43.100 -17.560 -1.158 0.363 1.461 H1 S1E 27 S1E H2 H2 H 0 1 N N N N N N -9.209 43.165 -15.787 -0.134 1.507 0.561 H2 S1E 28 S1E H3 H3 H 0 1 N N N N N N -9.869 40.177 -17.924 -1.195 3.184 -0.939 H3 S1E 29 S1E H4 H4 H 0 1 N N N N N N -12.105 39.573 -18.753 -3.119 4.699 -1.203 H4 S1E 30 S1E H5 H5 H 0 1 N N N N N N -14.074 40.904 -18.100 -5.235 4.214 -0.043 H5 S1E 31 S1E H6 H6 H 0 1 N N N N N N -13.799 42.808 -16.564 -5.429 2.214 1.381 H6 S1E 32 S1E H7 H7 H 0 1 N N N N N N -11.555 43.451 -15.782 -3.508 0.695 1.638 H7 S1E 33 S1E H8 H8 H 0 1 N N N N N N -8.845 40.751 -14.689 -3.086 -0.014 -0.867 H8 S1E 34 S1E H9 H9 H 0 1 N N N N N N -7.124 40.354 -15.019 -2.159 -0.861 -2.129 H9 S1E 35 S1E H10 H10 H 0 1 N N N N N N -5.864 42.980 -15.348 -1.314 -3.108 -1.753 H10 S1E 36 S1E H11 H11 H 0 1 N N N N N N -4.906 44.443 -13.619 -1.613 -5.233 -0.546 H11 S1E 37 S1E H12 H12 H 0 1 N N N N N N -5.984 44.624 -11.419 -2.881 -5.283 1.564 H12 S1E 38 S1E H13 H13 H 0 1 N N N N N N -8.057 43.365 -10.965 -3.850 -3.207 2.468 H13 S1E 39 S1E H14 H14 H 0 1 N N N N N N -8.979 41.844 -12.662 -3.544 -1.081 1.265 H14 S1E 40 S1E H15 H15 H 0 1 N N N N N N -5.253 41.385 -15.758 0.636 2.264 -0.385 H15 S1E 41 S1E H16 H16 H 0 1 N N N N N N -3.319 39.894 -15.467 2.724 3.172 0.536 H16 S1E 42 S1E H17 H17 H 0 1 N N N N N N -2.703 37.174 -15.874 5.644 2.362 0.299 H17 S1E 43 S1E O2 O3 O 0 1 N N N N N N -5.138 36.046 -19.126 5.518 -1.989 0.058 O2 S1E 44 S1E H19 H19 H 0 1 N N N N N N -6.807 38.798 -18.783 2.487 -1.581 -0.802 H19 S1E 45 S1E H20 H20 H 0 1 N N N N N N -4.678 35.220 -19.218 6.434 -2.181 0.302 H20 S1E 46 S1E H18 H18 H 0 1 N N N N N N -1.930 37.913 -17.318 5.113 1.921 1.940 H18 S1E 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal S1E O C DOUB N N 1 S1E B C3 SING N N 2 S1E B O1 SING N N 3 S1E C20 C19 DOUB Y N 4 S1E C20 C21 SING Y N 5 S1E C2 C3 SING Y N 6 S1E C2 C1 DOUB Y N 7 S1E C3 C6 DOUB Y N 8 S1E C19 C18 SING Y N 9 S1E O1 C7 SING N N 10 S1E C21 C16 DOUB Y N 11 S1E C C1 SING N N 12 S1E C N SING N N 13 S1E C1 C4 SING Y N 14 S1E C6 C7 SING N N 15 S1E C6 C5 SING Y N 16 S1E C18 C17 DOUB Y N 17 S1E C16 C15 SING N N 18 S1E C16 C17 SING Y N 19 S1E C15 N SING N N 20 S1E N C8 SING N N 21 S1E C4 C5 DOUB Y N 22 S1E C8 C9 SING N N 23 S1E C14 C9 DOUB Y N 24 S1E C14 C13 SING Y N 25 S1E C9 C10 SING Y N 26 S1E C13 C12 DOUB Y N 27 S1E C10 C11 DOUB Y N 28 S1E C12 C11 SING Y N 29 S1E C15 H1 SING N N 30 S1E C15 H2 SING N N 31 S1E C21 H3 SING N N 32 S1E C20 H4 SING N N 33 S1E C19 H5 SING N N 34 S1E C18 H6 SING N N 35 S1E C17 H7 SING N N 36 S1E C8 H8 SING N N 37 S1E C8 H9 SING N N 38 S1E C14 H10 SING N N 39 S1E C13 H11 SING N N 40 S1E C12 H12 SING N N 41 S1E C11 H13 SING N N 42 S1E C10 H14 SING N N 43 S1E C4 H15 SING N N 44 S1E C5 H16 SING N N 45 S1E C7 H17 SING N N 46 S1E B O2 SING N N 47 S1E C2 H19 SING N N 48 S1E O2 H20 SING N N 49 S1E C7 H18 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor S1E InChI InChI 1.03 'InChI=1S/C22H20BNO3/c25-22(19-11-12-20-16-27-23(26)21(20)13-19)24(14-17-7-3-1-4-8-17)15-18-9-5-2-6-10-18/h1-13,26H,14-16H2' S1E InChIKey InChI 1.03 KHPGSFWNOIQUOW-UHFFFAOYSA-N S1E SMILES_CANONICAL CACTVS 3.385 'OB1OCc2ccc(cc12)C(=O)N(Cc3ccccc3)Cc4ccccc4' S1E SMILES CACTVS 3.385 'OB1OCc2ccc(cc12)C(=O)N(Cc3ccccc3)Cc4ccccc4' S1E SMILES_CANONICAL 'OpenEye OEToolkits' 2.0.7 'B1(c2cc(ccc2CO1)C(=O)N(Cc3ccccc3)Cc4ccccc4)O' S1E SMILES 'OpenEye OEToolkits' 2.0.7 'B1(c2cc(ccc2CO1)C(=O)N(Cc3ccccc3)Cc4ccccc4)O' # _pdbx_chem_comp_identifier.comp_id S1E _pdbx_chem_comp_identifier.type 'SYSTEMATIC NAME' _pdbx_chem_comp_identifier.program 'OpenEye OEToolkits' _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier '1-oxidanyl-~{N},~{N}-bis(phenylmethyl)-3~{H}-2,1-benzoxaborole-6-carboxamide' # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id S1E _pdbx_chem_comp_synonyms.name '1-oxidanyl-N,N-bis(phenylmethyl)-3H-2,1-benzoxaborole-6-carboxamide' _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site S1E 'Create component' 2020-11-05 PDBE S1E 'Initial release' 2021-08-11 RCSB S1E 'Modify PCM' 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id S1E _pdbx_chem_comp_pcm.modified_residue_id SER _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category 'Covalent chemical modification' _pdbx_chem_comp_pcm.position 'Amino-acid side chain' _pdbx_chem_comp_pcm.polypeptide_position 'Any position' _pdbx_chem_comp_pcm.comp_id_linking_atom B _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? # _pdbe_chem_comp_synonyms.comp_id S1E _pdbe_chem_comp_synonyms.name 1-oxidanyl-N,N-bis(phenylmethyl)-3H-2,1-benzoxaborole-6-carboxamide _pdbe_chem_comp_synonyms.provenance wwPDB _pdbe_chem_comp_synonyms.type ? # loop_ _software.name _software.version _software.description rdkit 2025.03.3 'Core functionality.' pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.' # loop_ _pdbe_chem_comp_atom_depiction.comp_id _pdbe_chem_comp_atom_depiction.atom_id _pdbe_chem_comp_atom_depiction.element _pdbe_chem_comp_atom_depiction.model_Cartn_x _pdbe_chem_comp_atom_depiction.model_Cartn_y _pdbe_chem_comp_atom_depiction.pdbx_ordinal S1E O O 8.196 -1.875 1 S1E C C 8.196 -0.375 2 S1E N N 6.897 0.375 3 S1E C15 C 5.598 -0.375 4 S1E C16 C 5.598 -1.875 5 S1E C21 C 4.299 -2.625 6 S1E C20 C 4.299 -4.125 7 S1E C19 C 5.598 -4.875 8 S1E C18 C 6.897 -4.125 9 S1E C17 C 6.897 -2.625 10 S1E C8 C 6.897 1.875 11 S1E C9 C 5.598 2.625 12 S1E C14 C 5.598 4.125 13 S1E C13 C 4.299 4.875 14 S1E C12 C 3.000 4.125 15 S1E C11 C 3.000 2.625 16 S1E C10 C 4.299 1.875 17 S1E C1 C 9.495 0.375 18 S1E C4 C 9.495 1.875 19 S1E C5 C 10.794 2.625 20 S1E C6 C 12.093 1.875 21 S1E C7 C 13.513 2.332 22 S1E O1 O 14.388 1.125 23 S1E B B 13.513 -0.082 24 S1E C3 C 12.093 0.375 25 S1E C2 C 10.794 -0.375 26 S1E O2 O 13.979 -1.508 27 # loop_ _pdbe_chem_comp_bond_depiction.comp_id _pdbe_chem_comp_bond_depiction.atom_id_1 _pdbe_chem_comp_bond_depiction.atom_id_2 _pdbe_chem_comp_bond_depiction.value_order _pdbe_chem_comp_bond_depiction.bond_dir _pdbe_chem_comp_bond_depiction.pdbx_ordinal S1E O C DOUBLE NONE 1 S1E B C3 SINGLE NONE 2 S1E B O1 SINGLE NONE 3 S1E C20 C19 SINGLE NONE 4 S1E C20 C21 DOUBLE NONE 5 S1E C2 C3 DOUBLE NONE 6 S1E C2 C1 SINGLE NONE 7 S1E C3 C6 SINGLE NONE 8 S1E C19 C18 DOUBLE NONE 9 S1E O1 C7 SINGLE NONE 10 S1E C21 C16 SINGLE NONE 11 S1E C C1 SINGLE NONE 12 S1E C N SINGLE NONE 13 S1E C1 C4 DOUBLE NONE 14 S1E C6 C7 SINGLE NONE 15 S1E C6 C5 DOUBLE NONE 16 S1E C18 C17 SINGLE NONE 17 S1E C16 C15 SINGLE NONE 18 S1E C16 C17 DOUBLE NONE 19 S1E C15 N SINGLE NONE 20 S1E N C8 SINGLE NONE 21 S1E C4 C5 SINGLE NONE 22 S1E C8 C9 SINGLE NONE 23 S1E C14 C9 DOUBLE NONE 24 S1E C14 C13 SINGLE NONE 25 S1E C9 C10 SINGLE NONE 26 S1E C13 C12 DOUBLE NONE 27 S1E C10 C11 DOUBLE NONE 28 S1E C12 C11 SINGLE NONE 29 S1E B O2 SINGLE NONE 30 # loop_ _pdbe_chem_comp_substructure.comp_id _pdbe_chem_comp_substructure.substructure_name _pdbe_chem_comp_substructure.id _pdbe_chem_comp_substructure.substructure_type _pdbe_chem_comp_substructure.substructure_smiles _pdbe_chem_comp_substructure.substructure_inchis _pdbe_chem_comp_substructure.substructure_inchikeys S1E MurckoScaffold S1 scaffold O=C(c1ccc2c(c1)BOC2)N(Cc1ccccc1)Cc1ccccc1 InChI=1S/C22H20BNO2/c25-22(19-11-12-20-16-26-23-21(20)13-19)24(14-17-7-3-1-4-8-17)15-18-9-5-2-6-10-18/h1-13,23H,14-16H2 YJYPBEPQFKRZEC-UHFFFAOYSA-N S1E amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N S1E phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N # loop_ _pdbe_chem_comp_substructure_mapping.comp_id _pdbe_chem_comp_substructure_mapping.atom_id _pdbe_chem_comp_substructure_mapping.substructure_id _pdbe_chem_comp_substructure_mapping.substructure_ordinal S1E O S1 1 S1E C S1 1 S1E N S1 1 S1E C15 S1 1 S1E C16 S1 1 S1E C21 S1 1 S1E C20 S1 1 S1E C19 S1 1 S1E C18 S1 1 S1E C17 S1 1 S1E C8 S1 1 S1E C9 S1 1 S1E C14 S1 1 S1E C13 S1 1 S1E C12 S1 1 S1E C11 S1 1 S1E C10 S1 1 S1E C1 S1 1 S1E C4 S1 1 S1E C5 S1 1 S1E C6 S1 1 S1E C7 S1 1 S1E O1 S1 1 S1E B S1 1 S1E C3 S1 1 S1E C2 S1 1 S1E N F1 1 S1E C F1 1 S1E O F1 1 S1E C1 F1 1 S1E C16 F2 1 S1E C21 F2 1 S1E C20 F2 1 S1E C19 F2 1 S1E C18 F2 1 S1E C17 F2 1 S1E C9 F2 2 S1E C14 F2 2 S1E C13 F2 2 S1E C12 F2 2 S1E C11 F2 2 S1E C10 F2 2 S1E C1 F2 3 S1E C2 F2 3 S1E C3 F2 3 S1E C6 F2 3 S1E C5 F2 3 S1E C4 F2 3 # _pdbe_chem_comp_rdkit_properties.comp_id S1E _pdbe_chem_comp_rdkit_properties.exactmw 357.154 _pdbe_chem_comp_rdkit_properties.amw 357.218 _pdbe_chem_comp_rdkit_properties.lipinskiHBA 4 _pdbe_chem_comp_rdkit_properties.lipinskiHBD 1 _pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6 _pdbe_chem_comp_rdkit_properties.NumHBD 1 _pdbe_chem_comp_rdkit_properties.NumHBA 3 _pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 27 _pdbe_chem_comp_rdkit_properties.NumAtoms 47 _pdbe_chem_comp_rdkit_properties.NumHeteroatoms 5 _pdbe_chem_comp_rdkit_properties.NumAmideBonds 1 _pdbe_chem_comp_rdkit_properties.FractionCSP3 0.136 _pdbe_chem_comp_rdkit_properties.NumRings 4 _pdbe_chem_comp_rdkit_properties.NumAromaticRings 3 _pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1 _pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0 _pdbe_chem_comp_rdkit_properties.NumHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0 _pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0 _pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.labuteASA 186.907 _pdbe_chem_comp_rdkit_properties.tpsa 49.770 _pdbe_chem_comp_rdkit_properties.CrippenClogP 2.528 _pdbe_chem_comp_rdkit_properties.CrippenMR 104.235 _pdbe_chem_comp_rdkit_properties.chi0v 13.249 _pdbe_chem_comp_rdkit_properties.chi1v 7.339 _pdbe_chem_comp_rdkit_properties.chi2v 3.209 _pdbe_chem_comp_rdkit_properties.chi3v 3.209 _pdbe_chem_comp_rdkit_properties.chi4v 2.033 _pdbe_chem_comp_rdkit_properties.chi0n 33.249 _pdbe_chem_comp_rdkit_properties.chi1n 17.247 _pdbe_chem_comp_rdkit_properties.chi2n 3.209 _pdbe_chem_comp_rdkit_properties.chi3n 3.209 _pdbe_chem_comp_rdkit_properties.chi4n 2.033 _pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.885 _pdbe_chem_comp_rdkit_properties.kappa1 5.804 _pdbe_chem_comp_rdkit_properties.kappa2 7.782 _pdbe_chem_comp_rdkit_properties.kappa3 3.944 _pdbe_chem_comp_rdkit_properties.Phi 1.673 # _pdbe_chem_comp_external_mappings.comp_id S1E _pdbe_chem_comp_external_mappings.source UniChem _pdbe_chem_comp_external_mappings.resource PubChem _pdbe_chem_comp_external_mappings.resource_id 156587328 # loop_ _pdbe_chem_comp_rdkit_conformer.comp_id _pdbe_chem_comp_rdkit_conformer.atom_id _pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit _pdbe_chem_comp_rdkit_conformer.rdkit_method _pdbe_chem_comp_rdkit_conformer.rdkit_ordinal S1E O 0.337 -2.564 0.281 ETKDGv3 1 S1E C 0.509 -1.344 0.550 ETKDGv3 2 S1E N -0.534 -0.606 1.227 ETKDGv3 3 S1E C15 -1.418 -1.302 2.174 ETKDGv3 4 S1E C16 -2.777 -1.535 1.567 ETKDGv3 5 S1E C21 -2.978 -2.647 0.605 ETKDGv3 6 S1E C20 -4.170 -2.829 0.023 ETKDGv3 7 S1E C19 -5.295 -1.926 0.340 ETKDGv3 8 S1E C18 -5.123 -0.925 1.211 ETKDGv3 9 S1E C17 -3.808 -0.717 1.852 ETKDGv3 10 S1E C8 -0.751 0.828 0.962 ETKDGv3 11 S1E C9 -0.864 1.105 -0.516 ETKDGv3 12 S1E C14 -1.912 0.646 -1.224 ETKDGv3 13 S1E C13 -1.994 0.892 -2.679 ETKDGv3 14 S1E C12 -1.025 1.574 -3.300 ETKDGv3 15 S1E C11 0.126 2.088 -2.531 ETKDGv3 16 S1E C10 0.201 1.873 -1.212 ETKDGv3 17 S1E C1 1.776 -0.700 0.148 ETKDGv3 18 S1E C4 2.313 -0.949 -1.071 ETKDGv3 19 S1E C5 3.579 -0.286 -1.485 ETKDGv3 20 S1E C6 4.156 0.569 -0.635 ETKDGv3 21 S1E C7 5.464 1.277 -0.790 ETKDGv3 22 S1E O1 5.670 2.105 0.351 ETKDGv3 23 S1E B 4.598 1.753 1.307 ETKDGv3 24 S1E C3 3.590 0.820 0.651 ETKDGv3 25 S1E C2 2.483 0.216 1.087 ETKDGv3 26 S1E H1 -1.499 -0.705 3.109 ETKDGv3 27 S1E H2 -0.981 -2.279 2.475 ETKDGv3 28 S1E H3 -2.164 -3.320 0.370 ETKDGv3 29 S1E H4 -4.314 -3.640 -0.679 ETKDGv3 30 S1E H5 -6.257 -2.077 -0.133 ETKDGv3 31 S1E H6 -5.946 -0.262 1.445 ETKDGv3 32 S1E H7 -3.688 0.108 2.543 ETKDGv3 33 S1E H8 0.076 1.419 1.405 ETKDGv3 34 S1E H9 -1.677 1.185 1.462 ETKDGv3 35 S1E H10 -2.703 0.088 -0.744 ETKDGv3 36 S1E H11 -2.839 0.515 -3.241 ETKDGv3 37 S1E H12 -1.083 1.752 -4.366 ETKDGv3 38 S1E H13 0.907 2.642 -3.036 ETKDGv3 39 S1E H14 1.049 2.255 -0.658 ETKDGv3 40 S1E H15 1.821 -1.617 -1.767 ETKDGv3 41 S1E H16 4.026 -0.503 -2.447 ETKDGv3 42 S1E H17 6.289 0.537 -0.867 ETKDGv3 43 S1E O2 4.853 1.694 2.743 ETKDGv3 44 S1E H19 2.121 0.383 2.093 ETKDGv3 45 S1E H20 4.411 2.502 3.108 ETKDGv3 46 S1E H18 5.446 1.906 -1.705 ETKDGv3 47 #