data_RS4
#
_chem_comp.id RS4
_chem_comp.name 7-ethyl-10-hydroxycamptothecin
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C22 H20 N2 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms
"(4S)-4,11-diethyl-4,9-dihydroxy-1H-pyrano[3',4':6,7]indolizino[1,2-b]quinoline-3,14(4H,12H)-dione"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-02-24
_chem_comp.pdbx_modified_date 2021-03-13
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 392.405
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code RS4
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6VXJ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RS4 C10 C1 C 0 1 Y N N N N N -1.069 -1.710 5.433 -1.821 1.116 0.124 C10 RS4 1
RS4 C11 C2 C 0 1 Y N N N N N -0.789 -1.205 4.092 -1.131 -0.107 0.102 C11 RS4 2
RS4 C14 C3 C 0 1 N N N N N N -2.360 -3.513 6.887 -3.932 2.447 0.169 C14 RS4 3
RS4 C15 C4 C 0 1 N N N N N N -3.207 -2.660 7.792 -4.200 2.915 -1.262 C15 RS4 4
RS4 C16 C5 C 0 1 N N N N N N -0.338 -0.933 6.437 -0.779 2.205 0.133 C16 RS4 5
RS4 C17 C6 C 0 1 N N N N N N 0.135 -0.087 4.288 0.322 0.182 0.091 C17 RS4 6
RS4 C1 C7 C 0 1 Y N N N N N -2.140 -2.752 3.008 -3.120 -1.296 0.105 C1 RS4 7
RS4 C19 C8 C 0 1 N N N N N N 0.681 0.701 3.297 1.402 -0.675 0.068 C19 RS4 8
RS4 C2 C9 C 0 1 Y N N N N N -2.526 -3.383 4.297 -3.868 -0.090 0.122 C2 RS4 9
RS4 C20 C10 C 0 1 N N N N N N 1.531 1.722 3.673 2.707 -0.166 0.064 C20 RS4 10
RS4 C21 C11 C 0 1 N N N N N N 1.816 1.904 5.108 2.899 1.180 0.091 C21 RS4 11
RS4 C22 C12 C 0 1 N N N N N N 1.172 0.986 6.068 1.777 2.034 0.103 C22 RS4 12
RS4 C24 C13 C 0 1 N N N N N N 2.741 2.983 5.592 4.271 1.799 0.115 C24 RS4 13
RS4 C25 C14 C 0 1 N N S N N N 2.153 2.584 2.634 3.861 -1.135 0.010 C25 RS4 14
RS4 C28 C15 C 0 1 N N N N N N 2.829 3.781 3.234 5.145 -0.389 0.292 C28 RS4 15
RS4 C3 C16 C 0 1 Y N N N N N -3.394 -4.459 4.290 -5.269 -0.142 0.122 C3 RS4 16
RS4 C4 C17 C 0 1 Y N N N N N -3.895 -4.937 3.087 -5.900 -1.354 0.104 C4 RS4 17
RS4 C5 C18 C 0 1 Y N N N N N -3.533 -4.347 1.881 -5.165 -2.543 0.087 C5 RS4 18
RS4 C6 C19 C 0 1 Y N N N N N -2.665 -3.264 1.838 -3.806 -2.527 0.088 C6 RS4 19
RS4 C7 C20 C 0 1 N N N N N N 1.107 2.997 1.614 3.932 -1.770 -1.380 C7 RS4 20
RS4 C8 C21 C 0 1 N N N N N N 1.379 2.413 0.240 5.110 -2.745 -1.436 C8 RS4 21
RS4 C9 C22 C 0 1 Y N N N N N -1.987 -2.860 5.576 -3.181 1.141 0.138 C9 RS4 22
RS4 N13 N1 N 0 1 Y N N N N N -1.299 -1.701 2.949 -1.788 -1.257 0.094 N13 RS4 23
RS4 N18 N2 N 0 1 N N N N N N 0.366 0.045 5.593 0.527 1.532 0.109 N18 RS4 24
RS4 O1 O1 O 0 1 N N N N N N 3.151 1.801 1.981 3.675 -2.154 0.994 O1 RS4 25
RS4 O23 O2 O 0 1 N N N N N N 1.374 1.097 7.293 1.940 3.244 0.110 O23 RS4 26
RS4 O29 O3 O 0 1 N N N N N N 2.764 4.045 4.652 5.277 0.830 -0.279 O29 RS4 27
RS4 O31 O4 O 0 1 N N N N N N 3.443 4.560 2.531 6.010 -0.859 0.991 O31 RS4 28
RS4 O7 O5 O 0 1 N N N N N N -4.749 -5.998 3.081 -7.258 -1.404 0.104 O7 RS4 29
RS4 H1 H1 H 0 1 N N N N N N -2.917 -4.435 6.665 -3.336 3.196 0.691 H1 RS4 30
RS4 H2 H2 H 0 1 N N N N N N -1.432 -3.764 7.422 -4.879 2.309 0.690 H2 RS4 31
RS4 H3 H3 H 0 1 N N N N N N -3.428 -3.213 8.717 -3.253 3.053 -1.783 H3 RS4 32
RS4 H4 H4 H 0 1 N N N N N N -2.664 -1.736 8.039 -4.796 2.166 -1.784 H4 RS4 33
RS4 H5 H5 H 0 1 N N N N N N -4.148 -2.407 7.282 -4.744 3.860 -1.240 H5 RS4 34
RS4 H6 H6 H 0 1 N N N N N N -1.024 -0.438 7.140 -0.890 2.836 -0.748 H6 RS4 35
RS4 H7 H7 H 0 1 N N N N N N 0.369 -1.563 6.997 -0.874 2.806 1.037 H7 RS4 36
RS4 H8 H8 H 0 1 N N N N N N 0.450 0.525 2.257 1.241 -1.743 0.054 H8 RS4 37
RS4 H9 H9 H 0 1 N N N N N N 3.755 2.572 5.706 4.296 2.644 -0.573 H9 RS4 38
RS4 H10 H10 H 0 1 N N N N N N 2.387 3.361 6.563 4.488 2.152 1.123 H10 RS4 39
RS4 H11 H11 H 0 1 N N N N N N -3.682 -4.927 5.220 -5.846 0.771 0.135 H11 RS4 40
RS4 H12 H12 H 0 1 N N N N N N -3.935 -4.739 0.959 -5.685 -3.490 0.074 H12 RS4 41
RS4 H13 H13 H 0 1 N N N N N N -2.400 -2.822 0.889 -3.253 -3.455 0.074 H13 RS4 42
RS4 H14 H14 H 0 1 N N N N N N 1.102 4.094 1.537 3.006 -2.307 -1.582 H14 RS4 43
RS4 H15 H15 H 0 1 N N N N N N 0.122 2.649 1.957 4.070 -0.990 -2.129 H15 RS4 44
RS4 H16 H16 H 0 1 N N N N N N 0.596 2.741 -0.460 6.036 -2.207 -1.234 H16 RS4 45
RS4 H17 H17 H 0 1 N N N N N N 2.359 2.760 -0.118 4.972 -3.524 -0.687 H17 RS4 46
RS4 H18 H18 H 0 1 N N N N N N 1.379 1.315 0.302 5.161 -3.197 -2.426 H18 RS4 47
RS4 H19 H19 H 0 1 N N N N N N 3.899 2.349 1.773 4.385 -2.810 1.020 H19 RS4 48
RS4 H20 H20 H 0 1 N N N N N N -4.900 -6.289 3.973 -7.651 -1.405 -0.779 H20 RS4 49
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RS4 C8 C7 SING N N 1
RS4 C7 C25 SING N N 2
RS4 C6 C5 DOUB Y N 3
RS4 C6 C1 SING Y N 4
RS4 C5 C4 SING Y N 5
RS4 O1 C25 SING N N 6
RS4 O31 C28 DOUB N N 7
RS4 C25 C28 SING N N 8
RS4 C25 C20 SING N N 9
RS4 N13 C1 DOUB Y N 10
RS4 N13 C11 SING Y N 11
RS4 C1 C2 SING Y N 12
RS4 O7 C4 SING N N 13
RS4 C4 C3 DOUB Y N 14
RS4 C28 O29 SING N N 15
RS4 C19 C20 SING N N 16
RS4 C19 C17 DOUB N N 17
RS4 C20 C21 DOUB N N 18
RS4 C11 C17 SING N N 19
RS4 C11 C10 DOUB Y N 20
RS4 C17 N18 SING N N 21
RS4 C3 C2 SING Y N 22
RS4 C2 C9 DOUB Y N 23
RS4 O29 C24 SING N N 24
RS4 C21 C24 SING N N 25
RS4 C21 C22 SING N N 26
RS4 C10 C9 SING Y N 27
RS4 C10 C16 SING N N 28
RS4 C9 C14 SING N N 29
RS4 N18 C22 SING N N 30
RS4 N18 C16 SING N N 31
RS4 C22 O23 DOUB N N 32
RS4 C14 C15 SING N N 33
RS4 C14 H1 SING N N 34
RS4 C14 H2 SING N N 35
RS4 C15 H3 SING N N 36
RS4 C15 H4 SING N N 37
RS4 C15 H5 SING N N 38
RS4 C16 H6 SING N N 39
RS4 C16 H7 SING N N 40
RS4 C19 H8 SING N N 41
RS4 C24 H9 SING N N 42
RS4 C24 H10 SING N N 43
RS4 C3 H11 SING N N 44
RS4 C5 H12 SING N N 45
RS4 C6 H13 SING N N 46
RS4 C7 H14 SING N N 47
RS4 C7 H15 SING N N 48
RS4 C8 H16 SING N N 49
RS4 C8 H17 SING N N 50
RS4 C8 H18 SING N N 51
RS4 O1 H19 SING N N 52
RS4 O7 H20 SING N N 53
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RS4 SMILES ACDLabs 12.01 c32c(CC)c1c(ccc(c1)O)nc2C=4N(C3)C(C5=C(C=4)C(C(OC5)=O)(CC)O)=O
RS4 InChI InChI 1.03 InChI=1S/C22H20N2O5/c1-3-12-13-7-11(25)5-6-17(13)23-19-14(12)9-24-18(19)8-16-15(20(24)26)10-29-21(27)22(16,28)4-2/h5-8,25,28H,3-4,9-10H2,1-2H3/t22-/m0/s1
RS4 InChIKey InChI 1.03 FJHBVJOVLFPMQE-QFIPXVFZSA-N
RS4 SMILES_CANONICAL CACTVS 3.385 CCc1c2CN3C(=O)C4=C(C=C3c2nc5ccc(O)cc15)[C@@](O)(CC)C(=O)OC4
RS4 SMILES CACTVS 3.385 CCc1c2CN3C(=O)C4=C(C=C3c2nc5ccc(O)cc15)[C](O)(CC)C(=O)OC4
RS4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CCc1c2cc(ccc2nc3c1CN4C3=CC5=C(C4=O)COC(=O)[C@@]5(CC)O)O
RS4 SMILES "OpenEye OEToolkits" 2.0.7 CCc1c2cc(ccc2nc3c1CN4C3=CC5=C(C4=O)COC(=O)C5(CC)O)O
#
_pdbx_chem_comp_identifier.comp_id RS4
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program ACDLabs
_pdbx_chem_comp_identifier.program_version 12.01
_pdbx_chem_comp_identifier.identifier
"(4S)-4,11-diethyl-4,9-dihydroxy-1H-pyrano[3',4':6,7]indolizino[1,2-b]quinoline-3,14(4H,12H)-dione"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RS4 'Create component' 2020-02-24 RCSB
RS4 'Initial release' 2020-05-13 RCSB
RS4 'Modify synonyms' 2021-03-13 RCSB
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id RS4
_pdbx_chem_comp_synonyms.name
"(4S)-4,11-diethyl-4,9-dihydroxy-1H-pyrano[3',4':6,7]indolizino[1,2-b]quinoline-3,14(4H,12H)-dione"
_pdbx_chem_comp_synonyms.provenance PDB
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_details.comp_id RS4
_pdbe_chem_comp_drugbank_details.drugbank_id DB05482
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name SN-38
_pdbe_chem_comp_drugbank_details.description
'7-ethyl-10-hydroxycamptothecin (SN 38) is a liposomal formulation of the active metabolite of Irinotecan [DB00762],  a chemotherapeutic pro-drug approved for the treatment of advanced colorectal cancer. SN 38 has been used in trials studying the treatment of Cancer, Advanced Solid Tumors, Small Cell Lung Cancer, Metastatic Colorectal Cancer, and Triple Negative Breast Cancer, among others.'
_pdbe_chem_comp_drugbank_details.cas_number 86639-52-3
_pdbe_chem_comp_drugbank_details.mechanism_of_action
'The entrapment of SN-38 in lipsomes results in a more stable and more soluble form of the drug. This allows for increased affinity of SN-38 to lipid membranes and improved delivery of the drug to tumor sites. SN-38 is a highly effective cytotoxic topoisomerase I inhibitor.'
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
RS4 "(4S)-4,11-diethyl-4,9-dihydroxy-1H-pyrano[3',4':6,7]indolizino[1,2-b]quinoline-3,14(4H,12H)-dione" wwPDB ?
RS4 "1H-PYRANO(3',4':6,7)INDOLIZINO(1,2-B)QUINOLINE-3,14(4H,12H)-DIONE, 4,11-DIETHYL-4,9-DIHYDROXY-, (4S)-" DrugBank ?
RS4 'IRINOTECAN RELATED COMPOUND B' DrugBank ?
RS4 'NeoLipid Camptosar' DrugBank 'International brand'
#
_pdbe_chem_comp_drugbank_classification.comp_id RS4
_pdbe_chem_comp_drugbank_classification.drugbank_id DB05482
_pdbe_chem_comp_drugbank_classification.parent Camptothecins
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class Camptothecins
_pdbe_chem_comp_drugbank_classification.superclass 'Alkaloids and derivatives'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as camptothecins. These are heterocyclic compounds comprising a planar pentacyclic ring structure, that includes a pyrrolo[3,4-beta]-quinoline moiety (rings A, B and C), conjugated pyridone moiety (ring D) and one chiral center at position 20 within the alpha-hydroxy lactone ring with (S) configuration (the E-ring).'
#
_pdbe_chem_comp_drugbank_targets.comp_id RS4
_pdbe_chem_comp_drugbank_targets.drugbank_id DB05482
_pdbe_chem_comp_drugbank_targets.name 'DNA topoisomerase 1'
_pdbe_chem_comp_drugbank_targets.organism Humans
_pdbe_chem_comp_drugbank_targets.uniprot_id P11387
_pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
RS4 C10 C 5.775 0.306 1
RS4 C11 C 7.258 0.461 2
RS4 C14 C 3.627 -1.240 3
RS4 C15 C 3.000 -2.603 4
RS4 C16 C 5.168 1.668 5
RS4 C17 C 7.572 1.919 6
RS4 C1 C 7.568 -2.205 7
RS4 C19 C 8.871 2.669 8
RS4 C2 C 6.023 -2.366 9
RS4 C20 C 8.871 4.169 10
RS4 C21 C 7.572 4.919 11
RS4 C22 C 6.273 4.169 12
RS4 C24 C 7.548 6.481 13
RS4 C25 C 10.236 4.929 14
RS4 C28 C 10.248 6.492 15
RS4 C3 C 5.341 -3.833 16
RS4 C4 C 6.280 -5.150 17
RS4 C5 C 7.890 -4.982 18
RS4 C6 C 8.537 -3.500 19
RS4 C7 C 10.971 3.621 20
RS4 C8 C 10.206 2.331 21
RS4 C9 C 5.121 -1.102 22
RS4 N13 N 8.190 -0.782 23
RS4 N18 N 6.273 2.669 24
RS4 O1 O 11.736 4.912 25
RS4 O23 O 4.974 4.919 26
RS4 O29 O 8.895 7.273 27
RS4 O31 O 11.550 7.236 28
RS4 O7 O 5.664 -6.518 29
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
RS4 C8 C7 SINGLE NONE 1
RS4 C7 C25 SINGLE NONE 2
RS4 C6 C5 DOUBLE NONE 3
RS4 C6 C1 SINGLE NONE 4
RS4 C5 C4 SINGLE NONE 5
RS4 C25 O1 SINGLE BEGINWEDGE 6
RS4 O31 C28 DOUBLE NONE 7
RS4 C25 C28 SINGLE NONE 8
RS4 C25 C20 SINGLE NONE 9
RS4 N13 C1 DOUBLE NONE 10
RS4 N13 C11 SINGLE NONE 11
RS4 C1 C2 SINGLE NONE 12
RS4 O7 C4 SINGLE NONE 13
RS4 C4 C3 DOUBLE NONE 14
RS4 C28 O29 SINGLE NONE 15
RS4 C19 C20 SINGLE NONE 16
RS4 C19 C17 DOUBLE NONE 17
RS4 C20 C21 DOUBLE NONE 18
RS4 C11 C17 SINGLE NONE 19
RS4 C11 C10 DOUBLE NONE 20
RS4 C17 N18 SINGLE NONE 21
RS4 C3 C2 SINGLE NONE 22
RS4 C2 C9 DOUBLE NONE 23
RS4 O29 C24 SINGLE NONE 24
RS4 C21 C24 SINGLE NONE 25
RS4 C21 C22 SINGLE NONE 26
RS4 C10 C9 SINGLE NONE 27
RS4 C10 C16 SINGLE NONE 28
RS4 C9 C14 SINGLE NONE 29
RS4 N18 C22 SINGLE NONE 30
RS4 N18 C16 SINGLE NONE 31
RS4 C22 O23 DOUBLE NONE 32
RS4 C14 C15 SINGLE NONE 33
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
RS4 MurckoScaffold S1 scaffold O=C1Cc2cc3n(c(=O)c2CO1)Cc1cc2ccccc2nc1-3 InChI=1S/C18H12N2O3/c21-16-7-11-6-15-17-12(5-10-3-1-2-4-14(10)19-17)8-20(15)18(22)13(11)9-23-16/h1-6H,7-9H2 SNNLGDCYCOKWFN-UHFFFAOYSA-N
RS4 phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
RS4 pyridine F2 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
RS4 quinoline F3 fragment c1ccc2ncccc2c1 InChI=1S/C9H7N/c1-2-6-9-8(4-1)5-3-7-10-9/h1-7H SMWDFEZZVXVKRB-UHFFFAOYSA-N
RS4 Z57160161 F4 fragment c1ccc(-c2ccccn2)nc1 InChI=1S/C10H8N2/c1-3-7-11-9(5-1)10-6-2-4-8-12-10/h1-8H ROFVEXUMMXZLPA-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
RS4 C10 S1 1
RS4 C11 S1 1
RS4 C16 S1 1
RS4 C17 S1 1
RS4 C1 S1 1
RS4 C19 S1 1
RS4 C2 S1 1
RS4 C20 S1 1
RS4 C21 S1 1
RS4 C22 S1 1
RS4 C24 S1 1
RS4 C25 S1 1
RS4 C28 S1 1
RS4 C3 S1 1
RS4 C4 S1 1
RS4 C5 S1 1
RS4 C6 S1 1
RS4 C9 S1 1
RS4 N13 S1 1
RS4 N18 S1 1
RS4 O23 S1 1
RS4 O29 S1 1
RS4 O31 S1 1
RS4 C1 F1 1
RS4 C6 F1 1
RS4 C5 F1 1
RS4 C4 F1 1
RS4 C3 F1 1
RS4 C2 F1 1
RS4 C11 F2 1
RS4 C10 F2 1
RS4 C9 F2 1
RS4 C2 F2 1
RS4 C1 F2 1
RS4 N13 F2 1
RS4 C17 F2 2
RS4 C19 F2 2
RS4 C20 F2 2
RS4 C21 F2 2
RS4 C22 F2 2
RS4 N18 F2 2
RS4 C4 F3 1
RS4 C3 F3 1
RS4 C2 F3 1
RS4 C1 F3 1
RS4 C6 F3 1
RS4 C5 F3 1
RS4 N13 F3 1
RS4 C11 F3 1
RS4 C10 F3 1
RS4 C9 F3 1
RS4 C2 F4 1
RS4 C9 F4 1
RS4 C10 F4 1
RS4 C11 F4 1
RS4 N13 F4 1
RS4 C1 F4 1
RS4 C17 F4 1
RS4 C19 F4 1
RS4 C20 F4 1
RS4 C21 F4 1
RS4 C22 F4 1
RS4 N18 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id RS4
_pdbe_chem_comp_rdkit_properties.exactmw 392.137
_pdbe_chem_comp_rdkit_properties.amw 392.411
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 29
_pdbe_chem_comp_rdkit_properties.NumAtoms 49
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.318
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 194.025
_pdbe_chem_comp_rdkit_properties.tpsa 101.650
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.758
_pdbe_chem_comp_rdkit_properties.CrippenMR 100.474
_pdbe_chem_comp_rdkit_properties.chi0v 13.936
_pdbe_chem_comp_rdkit_properties.chi1v 7.843
_pdbe_chem_comp_rdkit_properties.chi2v 4.498
_pdbe_chem_comp_rdkit_properties.chi3v 4.498
_pdbe_chem_comp_rdkit_properties.chi4v 3.148
_pdbe_chem_comp_rdkit_properties.chi0n 33.936
_pdbe_chem_comp_rdkit_properties.chi1n 17.659
_pdbe_chem_comp_rdkit_properties.chi2n 4.498
_pdbe_chem_comp_rdkit_properties.chi3n 4.498
_pdbe_chem_comp_rdkit_properties.chi4n 3.148
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.190
_pdbe_chem_comp_rdkit_properties.kappa1 6.403
_pdbe_chem_comp_rdkit_properties.kappa2 5.904
_pdbe_chem_comp_rdkit_properties.kappa3 2.246
_pdbe_chem_comp_rdkit_properties.Phi 1.304
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
RS4 UniChem DrugBank DB05482
RS4 UniChem 'Guide to Pharmacology' 6925
RS4 UniChem 'PubChem DOTF' 12012598
RS4 UniChem 'KEGG LIGAND' C11173
RS4 UniChem ChEBI 8988
RS4 UniChem ZINC ZINC000004099013
RS4 UniChem eMolecules 2726126
RS4 UniChem fdasrs 0H43101T0J
RS4 UniChem HMDB HMDB0060510
RS4 UniChem Selleck sn-38
RS4 UniChem NMRShiftDB 60027678
RS4 UniChem LINCS LSM-45563
RS4 UniChem ACTor 86639-52-3
RS4 UniChem MetaboLights MTBLC8988
RS4 UniChem BRENDA 159265
RS4 UniChem Rhea 8988
RS4 UniChem ChemicalBook CB5320664
RS4 UniChem ClinicalTrials 7-ETHYL-10-HYDROXYCAMPTOTHECIN
RS4 UniChem ClinicalTrials IT-141
RS4 UniChem ClinicalTrials 'NK 012'
RS4 UniChem ClinicalTrials NK-012
RS4 UniChem ClinicalTrials NK012
RS4 UniChem ClinicalTrials 'SN 38'
RS4 UniChem ClinicalTrials SN-38
RS4 UniChem MedChemExpress HY-13704
RS4 UniChem 'Probes And Drugs' PD008594
RS4 UniChem CCDC AWICUG
RS4 UniChem 'EPA CompTox Dashboard' DTXSID4040399
RS4 UniChem SureChEMBL SCHEMBL34018
RS4 UniChem 'PubChem TPHARMA' 14805294
RS4 UniChem 'PubChem TPHARMA' 14805295
RS4 UniChem PubChem 104842
RS4 UniChem Mcule MCULE-4181372030
RS4 UniChem ACTor 113015-38-6
RS4 UniChem Nikkaji J353.490A
RS4 UniChem BindingDb 50418088
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
RS4 C10 -1.578 -0.600 0.289 ETKDGv3 1
RS4 C11 -0.689 0.291 -0.128 ETKDGv3 2
RS4 C14 -4.023 -1.325 0.705 ETKDGv3 3
RS4 C15 -4.547 -2.131 -0.480 ETKDGv3 4
RS4 C16 -0.899 -1.881 0.717 ETKDGv3 5
RS4 C17 0.632 -0.275 -0.027 ETKDGv3 6
RS4 C1 -2.329 1.894 -0.695 ETKDGv3 7
RS4 C19 1.804 0.229 -0.411 ETKDGv3 8
RS4 C2 -3.390 0.933 -0.248 ETKDGv3 9
RS4 C20 3.056 -0.587 -0.256 ETKDGv3 10
RS4 C21 2.968 -1.876 0.188 ETKDGv3 11
RS4 C22 1.646 -2.437 0.575 ETKDGv3 12
RS4 C24 4.166 -2.785 0.160 ETKDGv3 13
RS4 C25 4.401 0.018 -0.701 ETKDGv3 14
RS4 C28 5.569 -0.802 -0.188 ETKDGv3 15
RS4 C3 -4.801 1.376 -0.391 ETKDGv3 16
RS4 C4 -5.093 2.593 -0.883 ETKDGv3 17
RS4 C5 -4.026 3.531 -1.299 ETKDGv3 18
RS4 C6 -2.732 3.207 -1.215 ETKDGv3 19
RS4 C7 4.570 1.488 -0.202 ETKDGv3 20
RS4 C8 4.468 1.639 1.320 ETKDGv3 21
RS4 C9 -3.026 -0.282 0.251 ETKDGv3 22
RS4 N13 -1.066 1.574 -0.634 ETKDGv3 23
RS4 N18 0.513 -1.578 0.495 ETKDGv3 24
RS4 O1 4.469 -0.008 -2.106 ETKDGv3 25
RS4 O23 1.519 -3.632 0.954 ETKDGv3 26
RS4 O29 5.368 -2.060 0.369 ETKDGv3 27
RS4 O31 6.746 -0.359 -0.276 ETKDGv3 28
RS4 O7 -6.421 2.997 -1.014 ETKDGv3 29
RS4 H1 -3.544 -2.024 1.423 ETKDGv3 30
RS4 H2 -4.865 -0.860 1.257 ETKDGv3 31
RS4 H3 -5.065 -1.470 -1.205 ETKDGv3 32
RS4 H4 -5.268 -2.895 -0.120 ETKDGv3 33
RS4 H5 -3.709 -2.648 -0.993 ETKDGv3 34
RS4 H6 -1.084 -2.089 1.792 ETKDGv3 35
RS4 H7 -1.220 -2.728 0.074 ETKDGv3 36
RS4 H8 1.827 1.213 -0.858 ETKDGv3 37
RS4 H9 4.212 -3.285 -0.830 ETKDGv3 38
RS4 H10 4.088 -3.566 0.945 ETKDGv3 39
RS4 H11 -5.616 0.725 -0.113 ETKDGv3 40
RS4 H12 -4.304 4.504 -1.686 ETKDGv3 41
RS4 H13 -1.978 3.917 -1.534 ETKDGv3 42
RS4 H14 3.823 2.158 -0.675 ETKDGv3 43
RS4 H15 5.558 1.882 -0.528 ETKDGv3 44
RS4 H16 3.465 1.331 1.681 ETKDGv3 45
RS4 H17 4.625 2.703 1.596 ETKDGv3 46
RS4 H18 5.243 1.029 1.830 ETKDGv3 47
RS4 H19 3.733 0.556 -2.462 ETKDGv3 48
RS4 H20 -7.194 2.398 -0.746 ETKDGv3 49
#