data_RMX
#
_chem_comp.id RMX
_chem_comp.name
1,3-dimethyl-5-[[[9-propan-2-yl-6-[(4-pyridin-2-ylphenyl)methylamino]purin-2-yl]amino]methyl]pyrazole-4-sulfonamide
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C26 H30 N10 O2 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-12-05
_chem_comp.pdbx_modified_date 2023-09-08
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 546.647
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code RMX
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8BUS
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RMX C1 C1 C 0 1 Y N N N N N -116.808 59.814 -49.992 4.750 2.426 -0.078 C1 RMX 1
RMX C2 C2 C 0 1 Y N N N N N -118.076 59.638 -50.578 5.846 3.025 -0.710 C2 RMX 2
RMX C6 C3 C 0 1 N N N N N N -114.826 58.214 -49.533 2.694 1.104 -0.806 C6 RMX 3
RMX C5 C4 C 0 1 Y N N N N N -116.188 58.592 -50.021 3.976 1.862 -1.034 C5 RMX 4
RMX C4 C5 C 0 1 N N N N N N -116.894 56.314 -50.880 4.054 1.668 -3.534 C4 RMX 5
RMX C3 C6 C 0 1 N N N N N N -119.190 60.602 -50.823 6.965 3.765 -0.023 C3 RMX 6
RMX N1 N1 N 0 1 N N N N N N -115.452 62.013 -50.512 3.537 3.749 2.008 N1 RMX 7
RMX C7 C7 C 0 1 Y N N N N N -114.701 56.739 -47.574 1.966 -1.218 -0.390 C7 RMX 8
RMX O1 O1 O 0 1 N N N N N N -115.149 60.935 -48.395 3.597 1.284 1.898 O1 RMX 9
RMX C8 C8 C 0 1 Y N N N N N -113.298 55.061 -46.752 -0.303 -1.594 -0.144 C8 RMX 10
RMX C9 C9 C 0 1 N N N N N N -110.858 55.256 -46.983 -1.862 0.311 -0.301 C9 RMX 11
RMX C14 C10 C 0 1 Y N N N N N -108.576 59.130 -43.319 -7.529 1.288 0.022 C14 RMX 12
RMX C13 C11 C 0 1 Y N N N N N -109.171 58.142 -44.254 -6.069 1.036 -0.061 C13 RMX 13
RMX C12 C12 C 0 1 Y N N N N N -109.131 56.781 -43.969 -5.282 1.096 1.087 C12 RMX 14
RMX C11 C13 C 0 1 Y N N N N N -109.674 55.859 -44.843 -3.925 0.861 1.004 C11 RMX 15
RMX C10 C14 C 0 1 Y N N N N N -110.268 56.265 -46.026 -3.345 0.567 -0.217 C10 RMX 16
RMX N2 N2 N 0 1 Y N N N N N -118.216 58.367 -50.949 5.731 2.831 -1.998 N2 RMX 17
RMX O2 O2 O 0 1 N N N N N N -117.252 62.109 -48.933 5.695 2.585 2.292 O2 RMX 18
RMX C15 C15 C 0 1 Y N N N N N -109.011 60.442 -43.253 -8.307 1.225 -1.131 C15 RMX 19
RMX C16 C16 C 0 1 Y N N N N N -108.410 61.311 -42.366 -9.669 1.457 -1.037 C16 RMX 20
RMX C17 C17 C 0 1 Y N N N N N -107.381 60.858 -41.575 -10.207 1.744 0.209 C17 RMX 21
RMX C18 C18 C 0 1 Y N N N N N -106.991 59.546 -41.702 -9.375 1.790 1.313 C18 RMX 22
RMX C19 C19 C 0 1 Y N N N N N -109.756 58.545 -45.450 -5.480 0.733 -1.288 C19 RMX 23
RMX C20 C20 C 0 1 Y N N N N N -110.296 57.618 -46.321 -4.121 0.506 -1.360 C20 RMX 24
RMX C21 C21 C 0 1 Y N N N N N -114.440 54.274 -46.506 -0.034 -2.962 0.040 C21 RMX 25
RMX C22 C22 C 0 1 Y N N N N N -115.937 52.847 -46.021 -0.034 -5.107 0.364 C22 RMX 26
RMX C23 C23 C 0 1 N N N N N N -118.045 54.088 -46.711 2.430 -5.643 0.239 C23 RMX 27
RMX C24 C24 C 0 1 N N N N N N -118.647 52.924 -47.463 2.498 -6.330 1.605 C24 RMX 28
RMX C25 C25 C 0 1 N N N N N N -118.741 54.328 -45.386 2.292 -6.702 -0.857 C25 RMX 29
RMX C26 C26 C 0 1 Y N N N N N -115.647 54.849 -46.846 1.302 -3.391 -0.007 C26 RMX 30
RMX N10 N3 N 0 1 Y N N N N N -115.846 56.062 -47.376 2.262 -2.497 -0.222 N10 RMX 31
RMX N3 N4 N 0 1 Y N N N N N -117.053 57.734 -50.605 4.558 2.099 -2.228 N3 RMX 32
RMX N4 N5 N 0 1 N N N N N N -114.804 57.966 -48.106 2.994 -0.318 -0.617 N4 RMX 33
RMX N5 N6 N 0 1 Y N N N N N -113.460 56.286 -47.290 0.717 -0.770 -0.353 N5 RMX 34
RMX N6 N7 N 0 1 N N N N N N -112.059 54.621 -46.477 -1.601 -1.117 -0.108 N6 RMX 35
RMX N7 N8 N 0 1 Y N N N N N -107.562 58.683 -42.554 -8.082 1.566 1.195 N7 RMX 36
RMX N8 N9 N 0 1 Y N N N N N -114.632 53.001 -45.984 -0.798 -4.058 0.269 N8 RMX 37
RMX N9 N10 N 0 1 Y N N N N N -116.607 53.923 -46.526 1.272 -4.747 0.200 N9 RMX 38
RMX S1 S1 S 0 1 N N N N N N -116.163 61.282 -49.335 4.437 2.404 1.656 S1 RMX 39
RMX H9 H1 H 0 1 N N N N N N -114.503 57.302 -50.056 2.196 1.491 0.083 H9 RMX 40
RMX H10 H2 H 0 1 N N N N N N -114.128 59.033 -49.761 2.041 1.225 -1.671 H10 RMX 41
RMX H8 H3 H 0 1 N N N N N N -117.805 55.929 -51.362 4.458 0.685 -3.774 H8 RMX 42
RMX H6 H4 H 0 1 N N N N N N -116.034 56.164 -51.549 2.965 1.616 -3.503 H6 RMX 43
RMX H7 H5 H 0 1 N N N N N N -116.723 55.775 -49.937 4.361 2.384 -4.297 H7 RMX 44
RMX H3 H6 H 0 1 N N N N N N -120.026 60.080 -51.311 7.763 3.066 0.227 H3 RMX 45
RMX H4 H7 H 0 1 N N N N N N -119.529 61.021 -49.864 7.352 4.536 -0.689 H4 RMX 46
RMX H5 H8 H 0 1 N N N N N N -118.835 61.415 -51.474 6.589 4.228 0.889 H5 RMX 47
RMX H1 H9 H 0 1 N N N N N N -115.060 62.872 -50.183 2.908 3.731 2.746 H1 RMX 48
RMX H2 H10 H 0 1 N N N N N N -114.724 61.431 -50.874 3.638 4.554 1.476 H2 RMX 49
RMX H13 H11 H 0 1 N N N N N N -110.106 54.477 -47.177 -1.496 0.618 -1.281 H13 RMX 50
RMX H14 H12 H 0 1 N N N N N N -111.104 55.770 -47.924 -1.350 0.882 0.473 H14 RMX 51
RMX H16 H13 H 0 1 N N N N N N -108.670 56.441 -43.053 -5.734 1.327 2.041 H16 RMX 52
RMX H15 H14 H 0 1 N N N N N N -109.635 54.807 -44.600 -3.314 0.908 1.894 H15 RMX 53
RMX H17 H15 H 0 1 N N N N N N -109.814 60.783 -43.890 -7.855 0.999 -2.086 H17 RMX 54
RMX H18 H16 H 0 1 N N N N N N -108.744 62.335 -42.294 -10.298 1.415 -1.914 H18 RMX 55
RMX H19 H17 H 0 1 N N N N N N -106.892 61.516 -40.872 -11.266 1.930 0.316 H19 RMX 56
RMX H20 H18 H 0 1 N N N N N N -106.181 59.191 -41.082 -9.791 2.013 2.284 H20 RMX 57
RMX H21 H19 H 0 1 N N N N N N -109.789 59.595 -45.701 -6.085 0.685 -2.181 H21 RMX 58
RMX H22 H20 H 0 1 N N N N N N -110.746 57.953 -47.244 -3.663 0.276 -2.311 H22 RMX 59
RMX H23 H21 H 0 1 N N N N N N -116.434 51.950 -45.682 -0.381 -6.113 0.545 H23 RMX 60
RMX H24 H22 H 0 1 N N N N N N -118.203 54.987 -47.326 3.341 -5.068 0.076 H24 RMX 61
RMX H27 H23 H 0 1 N N N N N N -119.729 53.084 -47.583 3.360 -6.997 1.633 H27 RMX 62
RMX H25 H24 H 0 1 N N N N N N -118.176 52.845 -48.454 2.596 -5.576 2.386 H25 RMX 63
RMX H26 H25 H 0 1 N N N N N N -118.474 51.995 -46.900 1.587 -6.905 1.768 H26 RMX 64
RMX H29 H26 H 0 1 N N N N N N -118.272 55.181 -44.874 2.244 -6.213 -1.830 H29 RMX 65
RMX H30 H27 H 0 1 N N N N N N -119.804 54.547 -45.565 3.154 -7.369 -0.828 H30 RMX 66
RMX H28 H28 H 0 1 N N N N N N -118.652 53.430 -44.757 1.381 -7.277 -0.694 H28 RMX 67
RMX H11 H29 H 0 1 N N N N N N -114.028 58.486 -47.749 3.912 -0.628 -0.651 H11 RMX 68
RMX H12 H30 H 0 1 N N N N N N -112.026 53.675 -46.800 -2.338 -1.729 0.045 H12 RMX 69
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RMX N2 N3 SING Y N 1
RMX N2 C2 DOUB Y N 2
RMX C4 N3 SING N N 3
RMX C3 C2 SING N N 4
RMX N3 C5 SING Y N 5
RMX C2 C1 SING Y N 6
RMX N1 S1 SING N N 7
RMX C5 C1 DOUB Y N 8
RMX C5 C6 SING N N 9
RMX C1 S1 SING N N 10
RMX C6 N4 SING N N 11
RMX S1 O2 DOUB N N 12
RMX S1 O1 DOUB N N 13
RMX N4 C7 SING N N 14
RMX C7 N10 DOUB Y N 15
RMX C7 N5 SING Y N 16
RMX C24 C23 SING N N 17
RMX N10 C26 SING Y N 18
RMX N5 C8 DOUB Y N 19
RMX C9 N6 SING N N 20
RMX C9 C10 SING N N 21
RMX C26 N9 SING Y N 22
RMX C26 C21 DOUB Y N 23
RMX C8 C21 SING Y N 24
RMX C8 N6 SING N N 25
RMX C23 N9 SING N N 26
RMX C23 C25 SING N N 27
RMX N9 C22 SING Y N 28
RMX C21 N8 SING Y N 29
RMX C20 C10 DOUB Y N 30
RMX C20 C19 SING Y N 31
RMX C10 C11 SING Y N 32
RMX C22 N8 DOUB Y N 33
RMX C19 C13 DOUB Y N 34
RMX C11 C12 DOUB Y N 35
RMX C13 C12 SING Y N 36
RMX C13 C14 SING N N 37
RMX C14 C15 DOUB Y N 38
RMX C14 N7 SING Y N 39
RMX C15 C16 SING Y N 40
RMX N7 C18 DOUB Y N 41
RMX C16 C17 DOUB Y N 42
RMX C18 C17 SING Y N 43
RMX C6 H9 SING N N 44
RMX C6 H10 SING N N 45
RMX C4 H8 SING N N 46
RMX C4 H6 SING N N 47
RMX C4 H7 SING N N 48
RMX C3 H3 SING N N 49
RMX C3 H4 SING N N 50
RMX C3 H5 SING N N 51
RMX N1 H1 SING N N 52
RMX N1 H2 SING N N 53
RMX C9 H13 SING N N 54
RMX C9 H14 SING N N 55
RMX C12 H16 SING N N 56
RMX C11 H15 SING N N 57
RMX C15 H17 SING N N 58
RMX C16 H18 SING N N 59
RMX C17 H19 SING N N 60
RMX C18 H20 SING N N 61
RMX C19 H21 SING N N 62
RMX C20 H22 SING N N 63
RMX C22 H23 SING N N 64
RMX C23 H24 SING N N 65
RMX C24 H27 SING N N 66
RMX C24 H25 SING N N 67
RMX C24 H26 SING N N 68
RMX C25 H29 SING N N 69
RMX C25 H30 SING N N 70
RMX C25 H28 SING N N 71
RMX N4 H11 SING N N 72
RMX N6 H12 SING N N 73
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RMX InChI InChI 1.06 InChI=1S/C26H30N10O2S/c1-16(2)36-15-31-22-24(29-13-18-8-10-19(11-9-18)20-7-5-6-12-28-20)32-26(33-25(22)36)30-14-21-23(39(27,37)38)17(3)34-35(21)4/h5-12,15-16H,13-14H2,1-4H3,(H2,27,37,38)(H2,29,30,32,33)
RMX InChIKey InChI 1.06 DCNMIIRVWOSZDG-UHFFFAOYSA-N
RMX SMILES_CANONICAL CACTVS 3.385 CC(C)n1cnc2c(NCc3ccc(cc3)c4ccccn4)nc(NCc5n(C)nc(C)c5[S](N)(=O)=O)nc12
RMX SMILES CACTVS 3.385 CC(C)n1cnc2c(NCc3ccc(cc3)c4ccccn4)nc(NCc5n(C)nc(C)c5[S](N)(=O)=O)nc12
RMX SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 Cc1c(c(n(n1)C)CNc2nc(c3c(n2)n(cn3)C(C)C)NCc4ccc(cc4)c5ccccn5)S(=O)(=O)N
RMX SMILES "OpenEye OEToolkits" 3.1.0.0 Cc1c(c(n(n1)C)CNc2nc(c3c(n2)n(cn3)C(C)C)NCc4ccc(cc4)c5ccccn5)S(=O)(=O)N
#
_pdbx_chem_comp_identifier.comp_id RMX
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 3.1.0.0
_pdbx_chem_comp_identifier.identifier
1,3-dimethyl-5-[[[9-propan-2-yl-6-[(4-pyridin-2-ylphenyl)methylamino]purin-2-yl]amino]methyl]pyrazole-4-sulfonamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RMX 'Create component' 2022-12-05 PDBE
RMX 'Initial release' 2023-09-13 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
RMX C1 C 5.217 7.537 1
RMX C2 C 3.750 7.849 2
RMX C6 C 6.673 5.296 3
RMX C5 C 5.374 6.046 4
RMX C4 C 3.692 3.968 5
RMX C3 C 3.140 9.220 6
RMX N1 N 5.328 9.656 7
RMX C7 C 7.972 3.046 8
RMX O1 O 7.447 9.545 9
RMX C8 C 9.271 0.796 10
RMX C9 C 7.972 -1.454 11
RMX C14 C 7.972 -7.454 12
RMX C13 C 7.972 -5.954 13
RMX C12 C 9.271 -5.204 14
RMX C11 C 9.271 -3.704 15
RMX C10 C 7.972 -2.954 16
RMX N2 N 3.000 6.550 17
RMX O2 O 7.336 7.426 18
RMX C15 C 9.271 -8.204 19
RMX C16 C 9.271 -9.704 20
RMX C17 C 7.972 -10.454 21
RMX C18 C 6.673 -9.704 22
RMX C19 C 6.673 -5.204 23
RMX C20 C 6.673 -3.704 24
RMX C21 C 10.570 1.546 25
RMX C22 C 12.865 2.296 26
RMX C23 C 12.456 4.928 27
RMX C24 C 13.923 5.238 28
RMX C25 C 11.454 6.045 29
RMX C26 C 10.570 3.046 30
RMX N10 N 9.271 3.796 31
RMX N3 N 4.004 5.435 32
RMX N4 N 6.673 3.796 33
RMX N5 N 7.972 1.546 34
RMX N6 N 9.271 -0.704 35
RMX N7 N 6.673 -8.204 36
RMX N8 N 11.989 1.088 37
RMX N9 N 11.989 3.503 38
RMX S1 S 6.332 8.541 39
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
RMX N2 N3 SINGLE NONE 1
RMX N2 C2 DOUBLE NONE 2
RMX C4 N3 SINGLE NONE 3
RMX C3 C2 SINGLE NONE 4
RMX N3 C5 SINGLE NONE 5
RMX C2 C1 SINGLE NONE 6
RMX N1 S1 SINGLE NONE 7
RMX C5 C1 DOUBLE NONE 8
RMX C5 C6 SINGLE NONE 9
RMX C1 S1 SINGLE NONE 10
RMX C6 N4 SINGLE NONE 11
RMX S1 O2 DOUBLE NONE 12
RMX S1 O1 DOUBLE NONE 13
RMX N4 C7 SINGLE NONE 14
RMX C7 N10 DOUBLE NONE 15
RMX C7 N5 SINGLE NONE 16
RMX C24 C23 SINGLE NONE 17
RMX N10 C26 SINGLE NONE 18
RMX N5 C8 DOUBLE NONE 19
RMX C9 N6 SINGLE NONE 20
RMX C9 C10 SINGLE NONE 21
RMX C26 N9 SINGLE NONE 22
RMX C26 C21 DOUBLE NONE 23
RMX C8 C21 SINGLE NONE 24
RMX C8 N6 SINGLE NONE 25
RMX C23 N9 SINGLE NONE 26
RMX C23 C25 SINGLE NONE 27
RMX N9 C22 SINGLE NONE 28
RMX C21 N8 SINGLE NONE 29
RMX C20 C10 DOUBLE NONE 30
RMX C20 C19 SINGLE NONE 31
RMX C10 C11 SINGLE NONE 32
RMX C22 N8 DOUBLE NONE 33
RMX C19 C13 DOUBLE NONE 34
RMX C11 C12 DOUBLE NONE 35
RMX C13 C12 SINGLE NONE 36
RMX C13 C14 SINGLE NONE 37
RMX C14 C15 DOUBLE NONE 38
RMX C14 N7 SINGLE NONE 39
RMX C15 C16 SINGLE NONE 40
RMX N7 C18 DOUBLE NONE 41
RMX C16 C17 DOUBLE NONE 42
RMX C18 C17 SINGLE NONE 43
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
RMX MurckoScaffold S1 scaffold 'c1ccc(-c2ccc(CNc3nc(NCc4ccn[nH]4)nc4[nH]cnc34)cc2)nc1' InChI=1S/C21H19N9/c1-2-9-22-17(3-1)15-6-4-14(5-7-15)11-23-19-18-20(26-13-25-18)29-21(28-19)24-12-16-8-10-27-30-16/h1-10,13H,11-12H2,(H,27,30)(H3,23,24,25,26,28,29) KZLYBXAXHUTACQ-UHFFFAOYSA-N
RMX adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N
RMX imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
RMX phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
RMX purine F4 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
RMX pyrazole F5 fragment 'c1cn[nH]c1' InChI=1S/C3H4N2/c1-2-4-5-3-1/h1-3H,(H,4,5) WTKZEGDFNFYCGP-UHFFFAOYSA-N
RMX pyridine F6 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
RMX pyrimidine F7 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
RMX Z54628578 F8 fragment CNc1ncccn1 InChI=1S/C5H7N3/c1-6-5-7-3-2-4-8-5/h2-4H,1H3,(H,6,7,8) BQNXHDSGGRTFNX-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
RMX C1 S1 1
RMX C2 S1 1
RMX C6 S1 1
RMX C5 S1 1
RMX C7 S1 1
RMX C8 S1 1
RMX C9 S1 1
RMX C14 S1 1
RMX C13 S1 1
RMX C12 S1 1
RMX C11 S1 1
RMX C10 S1 1
RMX N2 S1 1
RMX C15 S1 1
RMX C16 S1 1
RMX C17 S1 1
RMX C18 S1 1
RMX C19 S1 1
RMX C20 S1 1
RMX C21 S1 1
RMX C22 S1 1
RMX C26 S1 1
RMX N10 S1 1
RMX N3 S1 1
RMX N4 S1 1
RMX N5 S1 1
RMX N6 S1 1
RMX N7 S1 1
RMX N8 S1 1
RMX N9 S1 1
RMX N5 F1 1
RMX C8 F1 1
RMX C21 F1 1
RMX C26 F1 1
RMX N10 F1 1
RMX C7 F1 1
RMX N9 F1 1
RMX C22 F1 1
RMX N8 F1 1
RMX N6 F1 1
RMX C21 F2 1
RMX C26 F2 1
RMX N9 F2 1
RMX C22 F2 1
RMX N8 F2 1
RMX C13 F3 1
RMX C19 F3 1
RMX C20 F3 1
RMX C10 F3 1
RMX C11 F3 1
RMX C12 F3 1
RMX N8 F4 1
RMX C22 F4 1
RMX N9 F4 1
RMX C26 F4 1
RMX C21 F4 1
RMX C8 F4 1
RMX N5 F4 1
RMX C7 F4 1
RMX N10 F4 1
RMX C2 F5 1
RMX C1 F5 1
RMX C5 F5 1
RMX N3 F5 1
RMX N2 F5 1
RMX C14 F6 1
RMX C15 F6 1
RMX C16 F6 1
RMX C17 F6 1
RMX C18 F6 1
RMX N7 F6 1
RMX C21 F7 1
RMX C26 F7 1
RMX N10 F7 1
RMX C7 F7 1
RMX N5 F7 1
RMX C8 F7 1
RMX C6 F8 1
RMX N4 F8 1
RMX C7 F8 1
RMX N10 F8 1
RMX C26 F8 1
RMX C21 F8 1
RMX C8 F8 1
RMX N5 F8 1
#
_pdbe_chem_comp_rdkit_properties.comp_id RMX
_pdbe_chem_comp_rdkit_properties.exactmw 546.227
_pdbe_chem_comp_rdkit_properties.amw 546.661
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 12
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 11
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 39
_pdbe_chem_comp_rdkit_properties.NumAtoms 69
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 13
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.269
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 5
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 268.326
_pdbe_chem_comp_rdkit_properties.tpsa 158.530
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.541
_pdbe_chem_comp_rdkit_properties.CrippenMR 143.949
_pdbe_chem_comp_rdkit_properties.chi0v 19.513
_pdbe_chem_comp_rdkit_properties.chi1v 11.385
_pdbe_chem_comp_rdkit_properties.chi2v 5.399
_pdbe_chem_comp_rdkit_properties.chi3v 5.399
_pdbe_chem_comp_rdkit_properties.chi4v 3.563
_pdbe_chem_comp_rdkit_properties.chi0n 48.697
_pdbe_chem_comp_rdkit_properties.chi1n 24.734
_pdbe_chem_comp_rdkit_properties.chi2n 4.497
_pdbe_chem_comp_rdkit_properties.chi3n 4.497
_pdbe_chem_comp_rdkit_properties.chi4n 2.901
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.360
_pdbe_chem_comp_rdkit_properties.kappa1 8.320
_pdbe_chem_comp_rdkit_properties.kappa2 10.422
_pdbe_chem_comp_rdkit_properties.kappa3 5.446
_pdbe_chem_comp_rdkit_properties.Phi 2.224
#
_pdbe_chem_comp_external_mappings.comp_id RMX
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 168477810
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
RMX C1 -3.717 1.602 0.257 ETKDGv3 1
RMX C2 -2.944 2.445 1.181 ETKDGv3 2
RMX C6 -3.498 1.048 -2.221 ETKDGv3 3
RMX C5 -3.100 1.703 -0.922 ETKDGv3 4
RMX C4 -1.218 3.218 -1.827 ETKDGv3 5
RMX C3 -3.237 2.686 2.625 ETKDGv3 6
RMX N1 -6.455 1.087 -0.463 ETKDGv3 7
RMX C7 -2.451 -1.212 -1.708 ETKDGv3 8
RMX O1 -4.884 -0.791 0.551 ETKDGv3 9
RMX C8 -0.140 -1.311 -1.032 ETKDGv3 10
RMX C9 1.292 0.758 -0.795 ETKDGv3 11
RMX C14 6.609 2.150 1.154 ETKDGv3 12
RMX C13 5.262 1.814 0.624 ETKDGv3 13
RMX C12 4.107 1.772 1.558 ETKDGv3 14
RMX C11 2.884 1.459 1.114 ETKDGv3 15
RMX C10 2.663 1.151 -0.317 ETKDGv3 16
RMX N2 -1.961 3.011 0.561 ETKDGv3 17
RMX O2 -5.640 1.000 2.025 ETKDGv3 18
RMX C15 7.551 2.749 0.397 ETKDGv3 19
RMX C16 8.866 3.068 0.985 ETKDGv3 20
RMX C17 9.114 2.772 2.264 ETKDGv3 21
RMX C18 8.060 2.131 3.070 ETKDGv3 22
RMX C19 5.059 1.506 -0.674 ETKDGv3 23
RMX C20 3.708 1.159 -1.161 ETKDGv3 24
RMX C21 -0.321 -2.762 -0.904 ETKDGv3 25
RMX C22 -0.169 -4.802 -0.240 ETKDGv3 26
RMX C23 -2.639 -5.505 -0.461 ETKDGv3 27
RMX C24 -3.569 -5.648 -1.668 ETKDGv3 28
RMX C25 -3.385 -4.942 0.753 ETKDGv3 29
RMX C26 -1.481 -3.297 -1.174 ETKDGv3 30
RMX N10 -2.604 -2.504 -1.574 ETKDGv3 31
RMX N3 -1.980 2.573 -0.766 ETKDGv3 32
RMX N4 -3.574 -0.404 -2.083 ETKDGv3 33
RMX N5 -1.166 -0.600 -1.425 ETKDGv3 34
RMX N6 1.111 -0.691 -0.712 ETKDGv3 35
RMX N7 6.907 1.854 2.534 ETKDGv3 36
RMX N8 0.543 -3.714 -0.295 ETKDGv3 37
RMX N9 -1.486 -4.663 -0.791 ETKDGv3 38
RMX S1 -5.179 0.680 0.632 ETKDGv3 39
RMX H9 -4.482 1.448 -2.542 ETKDGv3 40
RMX H10 -2.772 1.292 -3.022 ETKDGv3 41
RMX H8 -1.866 3.937 -2.368 ETKDGv3 42
RMX H6 -0.353 3.761 -1.392 ETKDGv3 43
RMX H7 -0.830 2.458 -2.535 ETKDGv3 44
RMX H3 -4.202 3.225 2.725 ETKDGv3 45
RMX H4 -3.292 1.717 3.162 ETKDGv3 46
RMX H5 -2.434 3.301 3.085 ETKDGv3 47
RMX H1 -6.341 0.498 -1.317 ETKDGv3 48
RMX H2 -6.315 2.081 -0.751 ETKDGv3 49
RMX H13 0.526 1.262 -0.168 ETKDGv3 50
RMX H14 1.144 1.089 -1.846 ETKDGv3 51
RMX H16 4.245 2.003 2.607 ETKDGv3 52
RMX H15 2.053 1.433 1.809 ETKDGv3 53
RMX H17 7.361 3.030 -0.631 ETKDGv3 54
RMX H18 9.627 3.545 0.380 ETKDGv3 55
RMX H19 10.074 3.004 2.706 ETKDGv3 56
RMX H20 8.243 1.891 4.109 ETKDGv3 57
RMX H21 5.877 1.476 -1.381 ETKDGv3 58
RMX H22 3.575 0.905 -2.205 ETKDGv3 59
RMX H23 0.197 -5.717 0.208 ETKDGv3 60
RMX H24 -2.272 -6.522 -0.199 ETKDGv3 61
RMX H27 -2.994 -6.009 -2.547 ETKDGv3 62
RMX H25 -4.048 -4.681 -1.924 ETKDGv3 63
RMX H26 -4.367 -6.388 -1.446 ETKDGv3 64
RMX H29 -4.216 -5.622 1.038 ETKDGv3 65
RMX H30 -2.691 -4.855 1.615 ETKDGv3 66
RMX H28 -3.805 -3.938 0.528 ETKDGv3 67
RMX H11 -4.484 -0.876 -2.289 ETKDGv3 68
RMX H12 1.905 -1.297 -0.403 ETKDGv3 69
#