data_RJX # _chem_comp.id RJX _chem_comp.name "4-[2-(3-chlorophenyl)acetamido]isoquinoline-6-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H13 Cl N2 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-22 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 340.760 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RJX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GMH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RJX N1 N1 N 0 1 N N N N N N -20.125 4.905 26.685 0.392 -0.312 -1.063 N1 RJX 1 RJX C4 C1 C 0 1 Y N N N N N -16.903 6.313 25.450 3.407 -1.653 0.651 C4 RJX 2 RJX C5 C2 C 0 1 Y N N N N N -16.175 5.098 25.382 2.921 -2.941 0.925 C5 RJX 3 RJX C6 C3 C 0 1 Y N N N N N -17.951 3.865 26.109 0.889 -2.457 -0.076 C6 RJX 4 RJX C7 C4 C 0 1 Y N N N N N -18.795 4.971 26.218 1.267 -1.168 -0.394 C7 RJX 5 RJX C8 C5 C 0 1 N N N N N N -20.549 4.831 27.964 -0.932 -0.377 -0.818 C8 RJX 6 RJX C10 C6 C 0 1 Y N N N N N -22.399 4.154 29.531 -3.280 0.330 -1.026 C10 RJX 7 RJX C13 C7 C 0 1 Y N N N N N -22.758 3.396 32.199 -5.880 -0.191 -0.239 C13 RJX 8 RJX C15 C8 C 0 1 Y N N N N N -22.388 2.810 29.888 -3.791 0.929 0.110 C15 RJX 9 RJX C17 C9 C 0 1 Y N N N N N -19.016 7.449 25.894 3.022 0.553 -0.312 C17 RJX 10 RJX CL CL1 CL 0 0 N N N N N N -22.543 0.763 31.641 -5.734 1.422 1.930 CL RJX 11 RJX C14 C10 C 0 1 Y N N N N N -22.560 2.452 31.213 -5.092 0.669 0.504 C14 RJX 12 RJX C12 C11 C 0 1 Y N N N N N -22.818 4.731 31.837 -5.368 -0.790 -1.375 C12 RJX 13 RJX C11 C12 C 0 1 Y N N N N N -22.642 5.105 30.514 -4.068 -0.530 -1.768 C11 RJX 14 RJX C9 C13 C 0 1 N N N N N N -22.035 4.571 28.124 -1.866 0.618 -1.458 C9 RJX 15 RJX O2 O1 O 0 1 N N N N N N -19.798 4.927 28.935 -1.372 -1.235 -0.083 O2 RJX 16 RJX N N2 N 0 1 Y N N N N N -16.676 3.909 25.698 1.708 -3.283 0.558 N RJX 17 RJX C16 C14 C 0 1 Y N N N N N -18.261 6.250 25.870 2.562 -0.737 -0.027 C16 RJX 18 RJX C3 C15 C 0 1 Y N N N N N -16.353 7.567 25.099 4.699 -1.254 1.035 C3 RJX 19 RJX C2 C16 C 0 1 Y N N N N N -17.115 8.697 25.126 5.130 0.003 0.756 C2 RJX 20 RJX C1 C17 C 0 1 Y N N N N N -18.462 8.648 25.504 4.300 0.919 0.084 C1 RJX 21 RJX C C18 C 0 1 N N N N N N -19.301 9.880 25.399 4.795 2.280 -0.207 C RJX 22 RJX O1 O2 O 0 1 N N N N N N -18.800 10.970 25.123 4.082 3.075 -0.787 O1 RJX 23 RJX O O3 O 0 1 N N N N N N -20.593 9.711 25.576 6.037 2.640 0.170 O RJX 24 RJX H1 H1 H 0 1 N N N N N N -20.839 4.914 25.984 0.737 0.332 -1.701 H1 RJX 25 RJX H2 H2 H 0 1 N N N N N N -15.148 5.142 25.052 3.547 -3.655 1.440 H2 RJX 26 RJX H3 H3 H 0 1 N N N N N N -18.356 2.900 26.376 -0.097 -2.801 -0.350 H3 RJX 27 RJX H4 H4 H 0 1 N N N N N N -22.864 3.100 33.232 -6.895 -0.395 0.068 H4 RJX 28 RJX H5 H5 H 0 1 N N N N N N -22.246 2.049 29.134 -3.175 1.601 0.690 H5 RJX 29 RJX H6 H6 H 0 1 N N N N N N -20.044 7.422 26.224 2.387 1.258 -0.828 H6 RJX 30 RJX H7 H7 H 0 1 N N N N N N -23.003 5.484 32.589 -5.983 -1.462 -1.956 H7 RJX 31 RJX H8 H8 H 0 1 N N N N N N -22.694 6.149 30.244 -3.668 -0.998 -2.655 H8 RJX 32 RJX H9 H9 H 0 1 N N N N N N -22.583 5.492 27.875 -1.589 1.626 -1.149 H9 RJX 33 RJX H10 H10 H 0 1 N N N N N N -22.330 3.770 27.431 -1.794 0.538 -2.543 H10 RJX 34 RJX H11 H11 H 0 1 N N N N N N -15.316 7.631 24.806 5.348 -1.946 1.551 H11 RJX 35 RJX H12 H12 H 0 1 N N N N N N -16.673 9.644 24.852 6.123 0.304 1.054 H12 RJX 36 RJX H13 H13 H 0 1 N N N N N N -21.040 10.541 25.458 6.317 3.541 -0.042 H13 RJX 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RJX C3 C2 DOUB Y N 1 RJX C3 C4 SING Y N 2 RJX O1 C DOUB N N 3 RJX C2 C1 SING Y N 4 RJX C5 C4 DOUB Y N 5 RJX C5 N SING Y N 6 RJX C C1 SING N N 7 RJX C O SING N N 8 RJX C4 C16 SING Y N 9 RJX C1 C17 DOUB Y N 10 RJX N C6 DOUB Y N 11 RJX C16 C17 SING Y N 12 RJX C16 C7 DOUB Y N 13 RJX C6 C7 SING Y N 14 RJX C7 N1 SING N N 15 RJX N1 C8 SING N N 16 RJX C8 C9 SING N N 17 RJX C8 O2 DOUB N N 18 RJX C9 C10 SING N N 19 RJX C10 C15 DOUB Y N 20 RJX C10 C11 SING Y N 21 RJX C15 C14 SING Y N 22 RJX C11 C12 DOUB Y N 23 RJX C14 CL SING N N 24 RJX C14 C13 DOUB Y N 25 RJX C12 C13 SING Y N 26 RJX N1 H1 SING N N 27 RJX C5 H2 SING N N 28 RJX C6 H3 SING N N 29 RJX C13 H4 SING N N 30 RJX C15 H5 SING N N 31 RJX C17 H6 SING N N 32 RJX C12 H7 SING N N 33 RJX C11 H8 SING N N 34 RJX C9 H9 SING N N 35 RJX C9 H10 SING N N 36 RJX C3 H11 SING N N 37 RJX C2 H12 SING N N 38 RJX O H13 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RJX SMILES ACDLabs 12.01 Clc1cccc(c1)CC(=O)Nc1cncc2ccc(cc21)C(=O)O RJX InChI InChI 1.06 InChI=1S/C18H13ClN2O3/c19-14-3-1-2-11(6-14)7-17(22)21-16-10-20-9-13-5-4-12(18(23)24)8-15(13)16/h1-6,8-10H,7H2,(H,21,22)(H,23,24) RJX InChIKey InChI 1.06 UKFWXTVAPKPVEE-UHFFFAOYSA-N RJX SMILES_CANONICAL CACTVS 3.385 OC(=O)c1ccc2cncc(NC(=O)Cc3cccc(Cl)c3)c2c1 RJX SMILES CACTVS 3.385 OC(=O)c1ccc2cncc(NC(=O)Cc3cccc(Cl)c3)c2c1 RJX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 c1cc(cc(c1)Cl)CC(=O)Nc2cncc3c2cc(cc3)C(=O)O RJX SMILES "OpenEye OEToolkits" 2.0.7 c1cc(cc(c1)Cl)CC(=O)Nc2cncc3c2cc(cc3)C(=O)O # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier RJX "SYSTEMATIC NAME" ACDLabs 12.01 "4-[2-(3-chlorophenyl)acetamido]isoquinoline-6-carboxylic acid" RJX "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[2-(3-chlorophenyl)ethanoylamino]isoquinoline-6-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RJX 'Create component' 2023-08-22 RCSB RJX 'Initial release' 2023-11-08 RCSB # loop_ _software.name _software.version _software.description rdkit 2025.03.3 'Core functionality.' pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.' # loop_ _pdbe_chem_comp_atom_depiction.comp_id _pdbe_chem_comp_atom_depiction.atom_id _pdbe_chem_comp_atom_depiction.element _pdbe_chem_comp_atom_depiction.model_Cartn_x _pdbe_chem_comp_atom_depiction.model_Cartn_y _pdbe_chem_comp_atom_depiction.pdbx_ordinal RJX N1 N 10.325 -0.345 1 RJX C4 C 9.002 -4.147 2 RJX C5 C 10.342 -4.949 3 RJX C6 C 11.701 -2.616 4 RJX C7 C 10.342 -1.845 5 RJX C8 C 11.615 0.419 6 RJX C10 C 12.888 2.684 7 RJX C13 C 15.469 4.214 8 RJX C15 C 14.196 1.950 9 RJX C17 C 7.702 -1.897 10 RJX CL Cl 16.794 1.980 11 RJX C14 C 15.486 2.714 12 RJX C12 C 14.161 4.949 13 RJX C11 C 12.871 4.184 14 RJX C9 C 11.598 1.919 15 RJX O2 O 12.923 -0.315 16 RJX N N 11.701 -4.178 17 RJX C16 C 9.002 -2.647 18 RJX C3 C 7.702 -4.897 19 RJX C2 C 6.404 -4.147 20 RJX C1 C 6.404 -2.647 21 RJX C C 5.104 -1.897 22 RJX O1 O 3.805 -2.647 23 RJX O O 5.104 -0.397 24 # loop_ _pdbe_chem_comp_bond_depiction.comp_id _pdbe_chem_comp_bond_depiction.atom_id_1 _pdbe_chem_comp_bond_depiction.atom_id_2 _pdbe_chem_comp_bond_depiction.value_order _pdbe_chem_comp_bond_depiction.bond_dir _pdbe_chem_comp_bond_depiction.pdbx_ordinal RJX C3 C2 DOUBLE NONE 1 RJX C3 C4 SINGLE NONE 2 RJX O1 C DOUBLE NONE 3 RJX C2 C1 SINGLE NONE 4 RJX C5 C4 DOUBLE NONE 5 RJX C5 N SINGLE NONE 6 RJX C C1 SINGLE NONE 7 RJX C O SINGLE NONE 8 RJX C4 C16 SINGLE NONE 9 RJX C1 C17 DOUBLE NONE 10 RJX N C6 DOUBLE NONE 11 RJX C16 C17 SINGLE NONE 12 RJX C16 C7 DOUBLE NONE 13 RJX C6 C7 SINGLE NONE 14 RJX C7 N1 SINGLE NONE 15 RJX N1 C8 SINGLE NONE 16 RJX C8 C9 SINGLE NONE 17 RJX C8 O2 DOUBLE NONE 18 RJX C9 C10 SINGLE NONE 19 RJX C10 C15 DOUBLE NONE 20 RJX C10 C11 SINGLE NONE 21 RJX C15 C14 SINGLE NONE 22 RJX C11 C12 DOUBLE NONE 23 RJX C14 CL SINGLE NONE 24 RJX C14 C13 DOUBLE NONE 25 RJX C12 C13 SINGLE NONE 26 # loop_ _pdbe_chem_comp_substructure.comp_id _pdbe_chem_comp_substructure.substructure_name _pdbe_chem_comp_substructure.id _pdbe_chem_comp_substructure.substructure_type _pdbe_chem_comp_substructure.substructure_smiles _pdbe_chem_comp_substructure.substructure_inchis _pdbe_chem_comp_substructure.substructure_inchikeys RJX MurckoScaffold S1 scaffold O=C(Cc1ccccc1)Nc1cncc2ccccc12 InChI=1S/C17H14N2O/c20-17(10-13-6-2-1-3-7-13)19-16-12-18-11-14-8-4-5-9-15(14)16/h1-9,11-12H,10H2,(H,19,20) IBEFUXAVGLACIF-UHFFFAOYSA-N RJX amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N RJX isoquinoline F2 fragment c1ccc2cnccc2c1 InChI=1S/C9H7N/c1-2-4-9-7-10-6-5-8(9)3-1/h1-7H AWJUIBRHMBBTKR-UHFFFAOYSA-N RJX phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N RJX pyridine F4 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N # loop_ _pdbe_chem_comp_substructure_mapping.comp_id _pdbe_chem_comp_substructure_mapping.atom_id _pdbe_chem_comp_substructure_mapping.substructure_id _pdbe_chem_comp_substructure_mapping.substructure_ordinal RJX N1 S1 1 RJX C4 S1 1 RJX C5 S1 1 RJX C6 S1 1 RJX C7 S1 1 RJX C8 S1 1 RJX C10 S1 1 RJX C13 S1 1 RJX C15 S1 1 RJX C17 S1 1 RJX C14 S1 1 RJX C12 S1 1 RJX C11 S1 1 RJX C9 S1 1 RJX O2 S1 1 RJX N S1 1 RJX C16 S1 1 RJX C3 S1 1 RJX C2 S1 1 RJX C1 S1 1 RJX N1 F1 1 RJX C8 F1 1 RJX O2 F1 1 RJX C9 F1 1 RJX C1 F2 1 RJX C17 F2 1 RJX C16 F2 1 RJX C4 F2 1 RJX C3 F2 1 RJX C2 F2 1 RJX C5 F2 1 RJX N F2 1 RJX C6 F2 1 RJX C7 F2 1 RJX C4 F3 1 RJX C3 F3 1 RJX C2 F3 1 RJX C1 F3 1 RJX C17 F3 1 RJX C16 F3 1 RJX C10 F3 2 RJX C15 F3 2 RJX C14 F3 2 RJX C13 F3 2 RJX C12 F3 2 RJX C11 F3 2 RJX C5 F4 1 RJX C4 F4 1 RJX C16 F4 1 RJX C7 F4 1 RJX C6 F4 1 RJX N F4 1 # _pdbe_chem_comp_rdkit_properties.comp_id RJX _pdbe_chem_comp_rdkit_properties.exactmw 340.061 _pdbe_chem_comp_rdkit_properties.amw 340.766 _pdbe_chem_comp_rdkit_properties.lipinskiHBA 5 _pdbe_chem_comp_rdkit_properties.lipinskiHBD 2 _pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4 _pdbe_chem_comp_rdkit_properties.NumHBD 2 _pdbe_chem_comp_rdkit_properties.NumHBA 4 _pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 24 _pdbe_chem_comp_rdkit_properties.NumAtoms 37 _pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6 _pdbe_chem_comp_rdkit_properties.NumAmideBonds 1 _pdbe_chem_comp_rdkit_properties.FractionCSP3 0.056 _pdbe_chem_comp_rdkit_properties.NumRings 3 _pdbe_chem_comp_rdkit_properties.NumAromaticRings 3 _pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0 _pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0 _pdbe_chem_comp_rdkit_properties.NumHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0 _pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0 _pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.labuteASA 160.864 _pdbe_chem_comp_rdkit_properties.tpsa 79.290 _pdbe_chem_comp_rdkit_properties.CrippenClogP 2.849 _pdbe_chem_comp_rdkit_properties.CrippenMR 88.926 _pdbe_chem_comp_rdkit_properties.chi0v 12.253 _pdbe_chem_comp_rdkit_properties.chi1v 6.574 _pdbe_chem_comp_rdkit_properties.chi2v 2.812 _pdbe_chem_comp_rdkit_properties.chi3v 2.812 _pdbe_chem_comp_rdkit_properties.chi4v 1.805 _pdbe_chem_comp_rdkit_properties.chi0n 24.497 _pdbe_chem_comp_rdkit_properties.chi1n 12.551 _pdbe_chem_comp_rdkit_properties.chi2n 2.623 _pdbe_chem_comp_rdkit_properties.chi3n 2.623 _pdbe_chem_comp_rdkit_properties.chi4n 1.663 _pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.920 _pdbe_chem_comp_rdkit_properties.kappa1 6.529 _pdbe_chem_comp_rdkit_properties.kappa2 6.680 _pdbe_chem_comp_rdkit_properties.kappa3 3.522 _pdbe_chem_comp_rdkit_properties.Phi 1.817 # _pdbe_chem_comp_external_mappings.comp_id RJX _pdbe_chem_comp_external_mappings.source UniChem _pdbe_chem_comp_external_mappings.resource PubChem _pdbe_chem_comp_external_mappings.resource_id 169408355 # loop_ _pdbe_chem_comp_rdkit_conformer.comp_id _pdbe_chem_comp_rdkit_conformer.atom_id _pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit _pdbe_chem_comp_rdkit_conformer.rdkit_method _pdbe_chem_comp_rdkit_conformer.rdkit_ordinal RJX N1 -0.350 -0.651 -0.663 ETKDGv3 1 RJX C4 2.960 -1.607 0.917 ETKDGv3 2 RJX C5 2.591 -2.694 1.609 ETKDGv3 3 RJX C6 0.329 -2.537 0.844 ETKDGv3 4 RJX C7 0.678 -1.317 0.084 ETKDGv3 5 RJX C8 -0.779 0.683 -0.355 ETKDGv3 6 RJX C10 -3.225 0.902 -0.455 ETKDGv3 7 RJX C13 -5.621 0.133 0.834 ETKDGv3 8 RJX C15 -3.891 -0.196 -0.858 ETKDGv3 9 RJX C17 2.433 0.266 -0.711 ETKDGv3 10 RJX CL -6.011 -2.021 -0.729 ETKDGv3 11 RJX C14 -5.148 -0.594 -0.187 ETKDGv3 12 RJX C12 -4.887 1.331 1.291 ETKDGv3 13 RJX C11 -3.751 1.695 0.684 ETKDGv3 14 RJX C9 -1.925 1.294 -1.100 ETKDGv3 15 RJX O2 -0.232 1.330 0.580 ETKDGv3 16 RJX N 1.232 -3.157 1.548 ETKDGv3 17 RJX C16 1.959 -0.884 0.096 ETKDGv3 18 RJX C3 4.344 -1.107 0.948 ETKDGv3 19 RJX C2 4.693 -0.041 0.219 ETKDGv3 20 RJX C1 3.718 0.672 -0.652 ETKDGv3 21 RJX C 4.183 1.825 -1.459 ETKDGv3 22 RJX O1 3.383 2.454 -2.203 ETKDGv3 23 RJX O 5.515 2.225 -1.400 ETKDGv3 24 RJX H1 -0.955 -1.234 -1.285 ETKDGv3 25 RJX H2 3.308 -3.236 2.213 ETKDGv3 26 RJX H3 -0.685 -2.914 0.827 ETKDGv3 27 RJX H4 -6.539 -0.152 1.332 ETKDGv3 28 RJX H5 -3.514 -0.801 -1.673 ETKDGv3 29 RJX H6 1.740 0.775 -1.368 ETKDGv3 30 RJX H7 -5.269 1.911 2.121 ETKDGv3 31 RJX H8 -3.216 2.571 1.028 ETKDGv3 32 RJX H9 -1.898 0.967 -2.163 ETKDGv3 33 RJX H10 -1.824 2.401 -1.101 ETKDGv3 34 RJX H11 5.089 -1.601 1.560 ETKDGv3 35 RJX H12 5.720 0.300 0.266 ETKDGv3 36 RJX H13 5.846 3.012 -1.946 ETKDGv3 37 #