data_QWP
#
_chem_comp.id QWP
_chem_comp.name mithramycin
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C52 H76 O24"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms
(1S)-5-deoxy-1-C-[(2S,3S)-7-{[2,6-dideoxy-3-O-(2,6-dideoxy-beta-D-arabino-hexopyranosyl)-beta-D-arabino-hexopyranosyl]oxy}-3-{[2,6-dideoxy-3-C-methyl-beta-D-ribo-hexopyranosyl-(1->3)-2,6-dideoxy-beta-D-lyxo-hexopyranosyl-(1->3)-2,6-dideoxy-beta-D-arabino-hexopyranosyl]oxy}-5,10-dihydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-1-O-methyl-D-xylulose
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-01-08
_chem_comp.pdbx_modified_date 2020-11-20
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 1085.145
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code QWP
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6VGG
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
QWP CAA C1 C 0 1 N N N N N N -54.427 49.165 -36.845 5.971 -7.614 -0.756 CAA QWP 1
QWP CAB C2 C 0 1 N N S N N N -54.498 50.649 -36.380 4.782 -8.423 -1.283 CAB QWP 2
QWP CAC C3 C 0 1 N N N N N N -53.077 51.233 -36.354 5.263 -9.800 -1.745 CAC QWP 3
QWP OAD O1 O 0 1 N N N N N N -55.058 50.697 -35.061 4.184 -7.732 -2.382 OAD QWP 4
QWP CAE C4 C 0 1 N N R N N N -55.366 51.490 -37.312 3.754 -8.590 -0.160 CAE QWP 5
QWP OAF O2 O 0 1 N N N N N N -55.522 52.817 -36.764 2.607 -9.280 -0.660 OAF QWP 6
QWP CAG C5 C 0 1 N N R N N N -56.730 50.843 -37.466 3.337 -7.207 0.350 CAG QWP 7
QWP CAH C6 C 0 1 N N N N N N -57.582 51.685 -38.419 2.355 -7.366 1.512 CAH QWP 8
QWP OAI O3 O 0 1 N N N N N N -56.574 49.516 -37.994 4.494 -6.497 0.796 OAI QWP 9
QWP CAJ C7 C 0 1 N N S N N N -55.862 48.660 -37.074 5.469 -6.270 -0.224 CAJ QWP 10
QWP OAK O4 O 0 1 N N N N N N -55.767 47.324 -37.623 6.565 -5.533 0.321 OAK QWP 11
QWP CAL C8 C 0 1 N N R N N N -57.021 46.634 -37.824 6.224 -4.212 0.746 CAL QWP 12
QWP CAM C9 C 0 1 N N N N N N -56.824 45.149 -37.499 6.416 -3.234 -0.417 CAM QWP 13
QWP CAN C10 C 0 1 N N S N N N -57.461 46.783 -39.274 7.135 -3.795 1.905 CAN QWP 14
QWP OAO O5 O 0 1 N N N N N N -56.393 46.358 -40.136 8.501 -3.888 1.496 OAO QWP 15
QWP CAP C11 C 0 1 N N R N N N -58.694 45.921 -39.515 6.815 -2.352 2.301 CAP QWP 16
QWP CAQ C12 C 0 1 N N N N N N -59.212 46.086 -40.950 7.761 -1.908 3.419 CAQ QWP 17
QWP OAR O6 O 0 1 N N N N N N -58.364 44.549 -39.276 6.984 -1.499 1.167 OAR QWP 18
QWP CAS C13 C 0 1 N N S N N N -58.048 44.321 -37.903 6.124 -1.812 0.069 CAS QWP 19
QWP OAT O7 O 0 1 N N N N N N -57.749 42.927 -37.744 6.356 -0.887 -0.996 OAT QWP 20
QWP CAU C14 C 0 1 N N R N N N -58.847 42.031 -38.006 6.005 0.462 -0.681 CAU QWP 21
QWP CAV C15 C 0 1 N N N N N N -58.802 40.940 -36.944 4.543 0.713 -1.060 CAV QWP 22
QWP CAW C16 C 0 1 N N R N N N -58.677 41.457 -39.412 6.899 1.422 -1.472 CAW QWP 23
QWP OAX O8 O 0 1 N N N N N N -59.044 42.465 -40.358 8.260 1.245 -1.074 OAX QWP 24
QWP CAY C17 C 0 1 N N R N N N -59.561 40.228 -39.616 6.464 2.862 -1.189 CAY QWP 25
QWP CAZ C18 C 0 1 N N N N N N -59.366 39.639 -41.022 7.313 3.824 -2.022 CAZ QWP 26
QWP OBA O9 O 0 1 N N N N N N -59.207 39.242 -38.646 5.087 3.019 -1.535 OBA QWP 27
QWP CBB C19 C 0 1 N N S N N N -59.580 39.694 -37.346 4.199 2.181 -0.793 CBB QWP 28
QWP OBC O10 O 0 1 N N N N N N -59.224 38.642 -36.448 2.852 2.437 -1.197 OBC QWP 29
QWP CBD C20 C 0 1 N N S N N N -60.295 37.733 -36.175 2.393 3.753 -0.887 CBD QWP 30
QWP CBE C21 C 0 1 N N S N N N -59.699 36.315 -36.029 1.351 4.199 -1.922 CBE QWP 31
QWP CBF C22 C 0 1 N N N N N N -60.755 35.357 -35.598 0.228 3.169 -1.985 CBF QWP 32
QWP CBG C23 C 0 1 N N S N N N -59.102 35.872 -37.390 0.776 5.557 -1.515 CBG QWP 33
QWP OBH O11 O 0 1 N N N N N N -60.134 35.842 -38.390 -0.263 5.926 -2.424 OBH QWP 34
QWP CBI C24 C 0 1 N N N N N N -59.663 36.053 -39.731 -1.542 6.089 -1.808 CBI QWP 35
QWP CBJ C25 C 0 1 N N N N N N -58.408 34.494 -37.294 1.868 6.596 -1.551 CBJ QWP 36
QWP OBK O12 O 0 1 N N N N N N -57.197 34.415 -37.104 2.018 7.280 -2.535 OBK QWP 37
QWP CBL C26 C 0 1 N N S N N N -59.268 33.223 -37.485 2.772 6.781 -0.360 CBL QWP 38
QWP OBM O13 O 0 1 N N N N N N -59.005 32.651 -38.768 3.953 7.479 -0.762 OBM QWP 39
QWP CBN C27 C 0 1 N N R N N N -58.937 32.190 -36.392 2.042 7.591 0.713 CBN QWP 40
QWP CBO C28 C 0 1 N N N N N N -59.970 31.053 -36.393 3.000 7.885 1.869 CBO QWP 41
QWP OBP O14 O 0 1 N N N N N N -57.632 31.645 -36.616 1.582 8.821 0.151 OBP QWP 42
QWP CBQ C29 C 0 1 N N N N N N -60.963 38.140 -35.008 1.716 3.757 0.467 CBQ QWP 43
QWP OBR O15 O 0 1 N N N N N N -61.158 39.339 -34.785 2.277 4.200 1.448 OBR QWP 44
QWP CBS C30 C 0 1 Y N N N N N -61.419 37.183 -34.099 0.357 3.207 0.554 CBS QWP 45
QWP CBT C31 C 0 1 Y N N N N N -61.992 37.566 -32.879 -0.205 2.969 1.812 CBT QWP 46
QWP OBU O16 O 0 1 N N N N N N -62.101 38.894 -32.591 0.499 3.238 2.937 OBU QWP 47
QWP CBV C32 C 0 1 Y N N N N N -61.301 35.818 -34.391 -0.367 2.927 -0.623 CBV QWP 48
QWP CBW C33 C 0 1 Y N N N N N -61.768 34.879 -33.470 -1.629 2.426 -0.544 CBW QWP 49
QWP CBX C34 C 0 1 Y N N N N N -62.334 35.282 -32.263 -2.226 2.175 0.707 CBX QWP 50
QWP CBY C35 C 0 1 Y N N N N N -62.781 34.313 -31.371 -3.526 1.658 0.791 CBY QWP 51
QWP CBZ C36 C 0 1 Y N N N N N -62.456 36.636 -31.949 -1.508 2.447 1.898 CBZ QWP 52
QWP CCA C37 C 0 1 Y N N N N N -63.032 36.990 -30.726 -2.107 2.193 3.149 CCA QWP 53
QWP OCB O17 O 0 1 N N N N N N -63.151 38.314 -30.417 -1.428 2.448 4.296 OCB QWP 54
QWP CCC C38 C 0 1 Y N N N N N -63.489 36.030 -29.813 -3.386 1.685 3.200 CCC QWP 55
QWP CCD C39 C 0 1 N N N N N N -64.062 36.403 -28.594 -4.028 1.414 4.536 CCD QWP 56
QWP CCE C40 C 0 1 Y N N N N N -63.351 34.674 -30.148 -4.092 1.418 2.026 CCE QWP 57
QWP OCF O18 O 0 1 N N N N N N -63.813 33.746 -29.246 -5.352 0.918 2.101 OCF QWP 58
QWP CCG C41 C 0 1 N N S N N N -63.081 32.486 -29.142 -6.024 0.666 0.865 CCG QWP 59
QWP CCH C42 C 0 1 N N N N N N -63.395 31.820 -27.806 -7.371 -0.007 1.144 CCH QWP 60
QWP OCI O19 O 0 1 N N N N N N -63.426 31.557 -30.201 -6.244 1.902 0.182 OCI QWP 61
QWP CCJ C43 C 0 1 N N R N N N -62.588 30.377 -30.153 -6.890 1.762 -1.085 CCJ QWP 62
QWP CCK C44 C 0 1 N N N N N N -62.848 29.494 -31.383 -7.046 3.139 -1.733 CCK QWP 63
QWP CCL C45 C 0 1 N N R N N N -62.884 29.617 -28.859 -8.272 1.133 -0.884 CCL QWP 64
QWP OCM O20 O 0 1 N N N N N N -62.076 28.433 -28.784 -8.897 0.939 -2.154 OCM QWP 65
QWP CCN C46 C 0 1 N N R N N N -62.574 30.533 -27.674 -8.111 -0.218 -0.180 CCN QWP 66
QWP OCO O21 O 0 1 N N N N N N -62.885 29.859 -26.430 -9.400 -0.779 0.077 OCO QWP 67
QWP CCP C47 C 0 1 N N S N N N -62.124 30.396 -25.318 -9.420 -2.207 0.091 CCP QWP 68
QWP CCQ C48 C 0 1 N N N N N N -62.894 30.198 -24.031 -10.814 -2.694 0.495 CCQ QWP 69
QWP OCR O22 O 0 1 N N N N N N -60.839 29.756 -25.182 -9.104 -2.701 -1.212 OCR QWP 70
QWP CCS C49 C 0 1 N N R N N N -60.029 30.437 -24.192 -9.071 -4.127 -1.303 CCS QWP 71
QWP CCT C50 C 0 1 N N N N N N -58.648 29.775 -24.114 -8.696 -4.538 -2.729 CCT QWP 72
QWP CCU C51 C 0 1 N N S N N N -60.709 30.399 -22.821 -10.451 -4.691 -0.955 CCU QWP 73
QWP OCV O23 O 0 1 N N N N N N -59.972 31.235 -21.914 -10.406 -6.119 -0.989 OCV QWP 74
QWP CCW C52 C 0 1 N N R N N N -62.149 30.907 -22.910 -10.845 -4.225 0.450 CCW QWP 75
QWP OCX O24 O 0 1 N N N N N N -62.819 30.655 -21.667 -12.163 -4.686 0.754 OCX QWP 76
QWP H1 H1 H 0 1 N N N N N N -53.938 48.556 -36.071 6.458 -8.165 0.049 H1 QWP 77
QWP H2 H2 H 0 1 N N N N N N -53.855 49.096 -37.782 6.683 -7.444 -1.564 H2 QWP 78
QWP H3 H3 H 0 1 N N N N N N -52.445 50.632 -35.684 5.716 -10.327 -0.905 H3 QWP 79
QWP H4 H4 H 0 1 N N N N N N -52.655 51.215 -37.370 4.416 -10.374 -2.120 H4 QWP 80
QWP H5 H5 H 0 1 N N N N N N -53.114 52.270 -35.990 6.000 -9.679 -2.539 H5 QWP 81
QWP H6 H6 H 0 1 N N N N N N -54.525 50.176 -34.471 4.782 -7.587 -3.127 H6 QWP 82
QWP H7 H7 H 0 1 N N N N N N -54.882 51.544 -38.298 4.196 -9.161 0.657 H7 QWP 83
QWP H8 H8 H 0 1 N N N N N N -54.668 53.223 -36.667 1.914 -9.420 -0.001 H8 QWP 84
QWP H9 H9 H 0 1 N N N N N N -57.224 50.806 -36.484 2.858 -6.652 -0.457 H9 QWP 85
QWP H10 H10 H 0 1 N N N N N N -57.698 52.699 -38.009 2.834 -7.921 2.319 H10 QWP 86
QWP H11 H11 H 0 1 N N N N N N -57.088 51.740 -39.400 2.058 -6.382 1.874 H11 QWP 87
QWP H12 H12 H 0 1 N N N N N N -58.573 51.220 -38.533 1.473 -7.909 1.171 H12 QWP 88
QWP H13 H13 H 0 1 N N N N N N -56.384 48.631 -36.106 5.018 -5.702 -1.038 H13 QWP 89
QWP H14 H14 H 0 1 N N N N N N -57.797 47.049 -37.164 5.184 -4.191 1.072 H14 QWP 90
QWP H15 H15 H 0 1 N N N N N N -56.658 45.038 -36.417 7.444 -3.292 -0.776 H15 QWP 91
QWP H16 H16 H 0 1 N N N N N N -55.944 44.777 -38.045 5.732 -3.491 -1.226 H16 QWP 92
QWP H17 H17 H 0 1 N N N N N N -57.713 47.836 -39.468 6.964 -4.453 2.757 H17 QWP 93
QWP H18 H18 H 0 1 N N N N N N -55.627 46.898 -39.982 9.135 -3.638 2.182 H18 QWP 94
QWP H19 H19 H 0 1 N N N N N N -59.485 46.240 -38.821 5.785 -2.290 2.652 H19 QWP 95
QWP H20 H20 H 0 1 N N N N N N -59.465 47.141 -41.130 7.535 -0.879 3.700 H20 QWP 96
QWP H21 H21 H 0 1 N N N N N N -58.433 45.769 -41.659 7.633 -2.558 4.284 H21 QWP 97
QWP H22 H22 H 0 1 N N N N N N -60.109 45.465 -41.089 8.792 -1.969 3.068 H22 QWP 98
QWP H23 H23 H 0 1 N N N N N N -58.897 44.604 -37.263 5.085 -1.743 0.390 H23 QWP 99
QWP H24 H24 H 0 1 N N N N N N -59.807 42.565 -37.943 6.140 0.634 0.387 H24 QWP 100
QWP H25 H25 H 0 1 N N N N N N -57.752 40.659 -36.773 4.398 0.492 -2.118 H25 QWP 101
QWP H26 H26 H 0 1 N N N N N N -59.232 41.338 -36.013 3.896 0.072 -0.462 H26 QWP 102
QWP H27 H27 H 0 1 N N N N N N -57.625 41.167 -39.554 6.801 1.215 -2.538 H27 QWP 103
QWP H28 H28 H 0 1 N N N N N N -58.496 43.231 -40.234 8.883 1.822 -1.536 H28 QWP 104
QWP H29 H29 H 0 1 N N N N N N -60.614 40.521 -39.496 6.600 3.081 -0.130 H29 QWP 105
QWP H30 H30 H 0 1 N N N N N N -60.012 38.757 -41.144 7.176 3.605 -3.081 H30 QWP 106
QWP H31 H31 H 0 1 N N N N N N -59.632 40.395 -41.776 7.003 4.850 -1.820 H31 QWP 107
QWP H32 H32 H 0 1 N N N N N N -58.314 39.344 -41.153 8.364 3.703 -1.759 H32 QWP 108
QWP H33 H33 H 0 1 N N N N N N -60.659 39.903 -37.297 4.306 2.391 0.272 H33 QWP 109
QWP H34 H34 H 0 1 N N N N N N -60.995 37.723 -37.024 3.233 4.448 -0.884 H34 QWP 110
QWP H35 H35 H 0 1 N N N N N N -58.894 36.341 -35.279 1.824 4.282 -2.901 H35 QWP 111
QWP H36 H36 H 0 1 N N N N N N -61.542 35.301 -36.365 -0.552 3.531 -2.656 H36 QWP 112
QWP H37 H37 H 0 1 N N N N N N -60.315 34.360 -35.450 0.624 2.231 -2.373 H37 QWP 113
QWP H38 H38 H 0 1 N N N N N N -58.341 36.612 -37.678 0.370 5.493 -0.506 H38 QWP 114
QWP H39 H39 H 0 1 N N N N N N -60.512 36.015 -40.429 -1.511 6.938 -1.125 H39 QWP 115
QWP H40 H40 H 0 1 N N N N N N -59.178 37.038 -39.798 -2.295 6.268 -2.576 H40 QWP 116
QWP H41 H41 H 0 1 N N N N N N -58.938 35.268 -39.993 -1.797 5.186 -1.254 H41 QWP 117
QWP H42 H42 H 0 1 N N N N N N -60.329 33.500 -37.401 3.046 5.806 0.043 H42 QWP 118
QWP H43 H43 H 0 1 N N N N N N -59.535 31.871 -38.882 3.785 8.356 -1.132 H43 QWP 119
QWP H44 H44 H 0 1 N N N N N N -58.971 32.693 -35.414 1.191 7.019 1.083 H44 QWP 120
QWP H45 H45 H 0 1 N N N N N N -59.717 30.326 -35.607 3.851 8.457 1.499 H45 QWP 121
QWP H46 H46 H 0 1 N N N N N N -60.971 31.467 -36.201 2.480 8.462 2.634 H46 QWP 122
QWP H47 H47 H 0 1 N N N N N N -59.962 30.551 -37.372 3.352 6.947 2.298 H47 QWP 123
QWP H48 H48 H 0 1 N N N N N N -57.033 32.344 -36.852 2.287 9.382 -0.199 H48 QWP 124
QWP H49 H49 H 0 1 N N N N N N -61.782 39.405 -33.325 0.375 4.137 3.272 H49 QWP 125
QWP H50 H50 H 0 1 N N N N N N -61.689 33.826 -33.696 -2.179 2.218 -1.450 H50 QWP 126
QWP H51 H51 H 0 1 N N N N N N -62.686 33.268 -31.627 -4.084 1.448 -0.109 H51 QWP 127
QWP H52 H52 H 0 1 N N N N N N -63.557 38.405 -29.563 -1.558 3.343 4.639 H52 QWP 128
QWP H53 H53 H 0 1 N N N N N N -65.149 36.519 -28.719 -4.562 2.303 4.870 H53 QWP 129
QWP H54 H54 H 0 1 N N N N N N -63.860 35.627 -27.841 -4.729 0.584 4.440 H54 QWP 130
QWP H55 H55 H 0 1 N N N N N N -63.628 37.357 -28.262 -3.259 1.157 5.264 H55 QWP 131
QWP H56 H56 H 0 1 N N N N N N -62.001 32.693 -29.179 -5.412 0.012 0.244 H56 QWP 132
QWP H57 H57 H 0 1 N N N N N N -63.138 32.505 -26.985 -7.204 -0.970 1.625 H57 QWP 133
QWP H58 H58 H 0 1 N N N N N N -64.467 31.578 -27.760 -7.968 0.630 1.798 H58 QWP 134
QWP H59 H59 H 0 1 N N N N N N -61.529 30.673 -30.152 -6.290 1.122 -1.731 H59 QWP 135
QWP H60 H60 H 0 1 N N N N N N -62.207 28.601 -31.336 -6.063 3.587 -1.875 H60 QWP 136
QWP H61 H61 H 0 1 N N N N N N -63.904 29.186 -31.397 -7.539 3.032 -2.699 H61 QWP 137
QWP H62 H62 H 0 1 N N N N N N -62.620 30.062 -32.297 -7.647 3.779 -1.087 H62 QWP 138
QWP H63 H63 H 0 1 N N N N N N -63.951 29.352 -28.836 -8.887 1.793 -0.272 H63 QWP 139
QWP H64 H64 H 0 1 N N N N N N -62.267 27.969 -27.977 -9.026 1.754 -2.658 H64 QWP 140
QWP H65 H65 H 0 1 N N N N N N -61.505 30.793 -27.699 -7.538 -0.894 -0.815 H65 QWP 141
QWP H66 H66 H 0 1 N N N N N N -61.977 31.475 -25.470 -8.685 -2.574 0.807 H66 QWP 142
QWP H67 H67 H 0 1 N N N N N N -63.903 30.623 -24.133 -11.040 -2.355 1.507 H67 QWP 143
QWP H68 H68 H 0 1 N N N N N N -62.970 29.124 -23.805 -11.555 -2.295 -0.197 H68 QWP 144
QWP H69 H69 H 0 1 N N N N N N -59.895 31.489 -24.486 -8.331 -4.519 -0.605 H69 QWP 145
QWP H70 H70 H 0 1 N N N N N N -58.034 30.293 -23.362 -7.714 -4.136 -2.977 H70 QWP 146
QWP H71 H71 H 0 1 N N N N N N -58.763 28.719 -23.829 -8.671 -5.626 -2.798 H71 QWP 147
QWP H72 H72 H 0 1 N N N N N N -58.155 29.838 -25.096 -9.436 -4.147 -3.426 H72 QWP 148
QWP H73 H73 H 0 1 N N N N N N -60.719 29.361 -22.457 -11.184 -4.333 -1.678 H73 QWP 149
QWP H74 H74 H 0 1 N N N N N N -60.386 31.218 -21.059 -10.157 -6.484 -1.850 H74 QWP 150
QWP H75 H75 H 0 1 N N N N N N -62.132 31.987 -23.119 -10.140 -4.626 1.178 H75 QWP 151
QWP H76 H76 H 0 1 N N N N N N -62.358 31.096 -20.963 -12.480 -4.421 1.629 H76 QWP 152
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
QWP CAZ CAY SING N N 1
QWP CAQ CAP SING N N 2
QWP OAX CAW SING N N 3
QWP OAO CAN SING N N 4
QWP CBI OBH SING N N 5
QWP CAY CAW SING N N 6
QWP CAY OBA SING N N 7
QWP CAP OAR SING N N 8
QWP CAP CAN SING N N 9
QWP CAW CAU SING N N 10
QWP OAR CAS SING N N 11
QWP CAN CAL SING N N 12
QWP OBM CBL SING N N 13
QWP OBA CBB SING N N 14
QWP CAH CAG SING N N 15
QWP OBH CBG SING N N 16
QWP CAU OAT SING N N 17
QWP CAU CAV SING N N 18
QWP OAI CAG SING N N 19
QWP OAI CAJ SING N N 20
QWP CAS OAT SING N N 21
QWP CAS CAM SING N N 22
QWP CAL OAK SING N N 23
QWP CAL CAM SING N N 24
QWP OAK CAJ SING N N 25
QWP CBL CBJ SING N N 26
QWP CBL CBN SING N N 27
QWP CAG CAE SING N N 28
QWP CBG CBJ SING N N 29
QWP CBG CBE SING N N 30
QWP CBB CAV SING N N 31
QWP CBB OBC SING N N 32
QWP CAE OAF SING N N 33
QWP CAE CAB SING N N 34
QWP CBJ OBK DOUB N N 35
QWP CAJ CAA SING N N 36
QWP CAA CAB SING N N 37
QWP OBP CBN SING N N 38
QWP OBC CBD SING N N 39
QWP CBO CBN SING N N 40
QWP CAB CAC SING N N 41
QWP CAB OAD SING N N 42
QWP CBD CBE SING N N 43
QWP CBD CBQ SING N N 44
QWP CBE CBF SING N N 45
QWP CBF CBV SING N N 46
QWP CBQ OBR DOUB N N 47
QWP CBQ CBS SING N N 48
QWP CBV CBS DOUB Y N 49
QWP CBV CBW SING Y N 50
QWP CBS CBT SING Y N 51
QWP CBW CBX DOUB Y N 52
QWP CBT OBU SING N N 53
QWP CBT CBZ DOUB Y N 54
QWP CBX CBZ SING Y N 55
QWP CBX CBY SING Y N 56
QWP CBZ CCA SING Y N 57
QWP CCK CCJ SING N N 58
QWP CBY CCE DOUB Y N 59
QWP CCA OCB SING N N 60
QWP CCA CCC DOUB Y N 61
QWP OCI CCJ SING N N 62
QWP OCI CCG SING N N 63
QWP CCJ CCL SING N N 64
QWP CCE CCC SING Y N 65
QWP CCE OCF SING N N 66
QWP CCC CCD SING N N 67
QWP OCF CCG SING N N 68
QWP CCG CCH SING N N 69
QWP CCL OCM SING N N 70
QWP CCL CCN SING N N 71
QWP CCH CCN SING N N 72
QWP CCN OCO SING N N 73
QWP OCO CCP SING N N 74
QWP CCP OCR SING N N 75
QWP CCP CCQ SING N N 76
QWP OCR CCS SING N N 77
QWP CCS CCT SING N N 78
QWP CCS CCU SING N N 79
QWP CCQ CCW SING N N 80
QWP CCW CCU SING N N 81
QWP CCW OCX SING N N 82
QWP CCU OCV SING N N 83
QWP CAA H1 SING N N 84
QWP CAA H2 SING N N 85
QWP CAC H3 SING N N 86
QWP CAC H4 SING N N 87
QWP CAC H5 SING N N 88
QWP OAD H6 SING N N 89
QWP CAE H7 SING N N 90
QWP OAF H8 SING N N 91
QWP CAG H9 SING N N 92
QWP CAH H10 SING N N 93
QWP CAH H11 SING N N 94
QWP CAH H12 SING N N 95
QWP CAJ H13 SING N N 96
QWP CAL H14 SING N N 97
QWP CAM H15 SING N N 98
QWP CAM H16 SING N N 99
QWP CAN H17 SING N N 100
QWP OAO H18 SING N N 101
QWP CAP H19 SING N N 102
QWP CAQ H20 SING N N 103
QWP CAQ H21 SING N N 104
QWP CAQ H22 SING N N 105
QWP CAS H23 SING N N 106
QWP CAU H24 SING N N 107
QWP CAV H25 SING N N 108
QWP CAV H26 SING N N 109
QWP CAW H27 SING N N 110
QWP OAX H28 SING N N 111
QWP CAY H29 SING N N 112
QWP CAZ H30 SING N N 113
QWP CAZ H31 SING N N 114
QWP CAZ H32 SING N N 115
QWP CBB H33 SING N N 116
QWP CBD H34 SING N N 117
QWP CBE H35 SING N N 118
QWP CBF H36 SING N N 119
QWP CBF H37 SING N N 120
QWP CBG H38 SING N N 121
QWP CBI H39 SING N N 122
QWP CBI H40 SING N N 123
QWP CBI H41 SING N N 124
QWP CBL H42 SING N N 125
QWP OBM H43 SING N N 126
QWP CBN H44 SING N N 127
QWP CBO H45 SING N N 128
QWP CBO H46 SING N N 129
QWP CBO H47 SING N N 130
QWP OBP H48 SING N N 131
QWP OBU H49 SING N N 132
QWP CBW H50 SING N N 133
QWP CBY H51 SING N N 134
QWP OCB H52 SING N N 135
QWP CCD H53 SING N N 136
QWP CCD H54 SING N N 137
QWP CCD H55 SING N N 138
QWP CCG H56 SING N N 139
QWP CCH H57 SING N N 140
QWP CCH H58 SING N N 141
QWP CCJ H59 SING N N 142
QWP CCK H60 SING N N 143
QWP CCK H61 SING N N 144
QWP CCK H62 SING N N 145
QWP CCL H63 SING N N 146
QWP OCM H64 SING N N 147
QWP CCN H65 SING N N 148
QWP CCP H66 SING N N 149
QWP CCQ H67 SING N N 150
QWP CCQ H68 SING N N 151
QWP CCS H69 SING N N 152
QWP CCT H70 SING N N 153
QWP CCT H71 SING N N 154
QWP CCT H72 SING N N 155
QWP CCU H73 SING N N 156
QWP OCV H74 SING N N 157
QWP CCW H75 SING N N 158
QWP OCX H76 SING N N 159
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
QWP SMILES ACDLabs 12.01 C1C(C)(O)C(O)C(C)OC1OC2CC(OC(C2O)C)OC3CC(OC(C3O)C)OC4C(Cc5c(C4=O)c(O)c6c(c5)cc(c(c6O)C)OC7CC(C(C(O7)C)O)OC8OC(C)C(O)C(C8)O)C(C(=O)C(C(C)O)O)OC
QWP InChI InChI 1.03 InChI=1S/C52H76O24/c1-18-29(72-34-14-30(43(58)21(4)68-34)73-33-13-28(54)42(57)20(3)67-33)12-26-10-25-11-27(49(66-9)48(63)41(56)19(2)53)50(47(62)39(25)46(61)38(26)40(18)55)76-36-16-31(44(59)23(6)70-36)74-35-15-32(45(60)22(5)69-35)75-37-17-52(8,65)51(64)24(7)71-37/h10,12,19-24,27-28,30-37,41-45,49-51,53-61,64-65H,11,13-17H2,1-9H3/t19-,20-,21-,22-,23-,24-,27+,28-,30-,31-,32-,33+,34+,35+,36+,37+,41+,42-,43-,44-,45+,49+,50+,51-,52+/m1/s1
QWP InChIKey InChI 1.03 CFCUWKMKBJTWLW-BKHRDMLASA-N
QWP SMILES_CANONICAL CACTVS 3.385 CO[C@@H]([C@@H]1Cc2cc3cc(O[C@H]4C[C@@H](O[C@H]5C[C@@H](O)[C@H](O)[C@@H](C)O5)[C@H](O)[C@@H](C)O4)c(C)c(O)c3c(O)c2C(=O)[C@H]1O[C@H]6C[C@@H](O[C@H]7C[C@@H](O[C@H]8C[C@](C)(O)[C@H](O)[C@@H](C)O8)[C@@H](O)[C@@H](C)O7)[C@H](O)[C@@H](C)O6)C(=O)[C@@H](O)[C@@H](C)O
QWP SMILES CACTVS 3.385 CO[CH]([CH]1Cc2cc3cc(O[CH]4C[CH](O[CH]5C[CH](O)[CH](O)[CH](C)O5)[CH](O)[CH](C)O4)c(C)c(O)c3c(O)c2C(=O)[CH]1O[CH]6C[CH](O[CH]7C[CH](O[CH]8C[C](C)(O)[CH](O)[CH](C)O8)[CH](O)[CH](C)O7)[CH](O)[CH](C)O6)C(=O)[CH](O)[CH](C)O
QWP SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 Cc1c(cc2cc3c(c(c2c1O)O)C(=O)[C@H]([C@@H](C3)[C@@H](C(=O)[C@H]([C@@H](C)O)O)OC)O[C@H]4C[C@H]([C@@H]([C@H](O4)C)O)O[C@H]5C[C@H]([C@H]([C@H](O5)C)O)O[C@H]6C[C@]([C@@H]([C@H](O6)C)O)(C)O)O[C@H]7C[C@H]([C@@H]([C@H](O7)C)O)O[C@H]8C[C@H]([C@@H]([C@H](O8)C)O)O
QWP SMILES "OpenEye OEToolkits" 2.0.7 Cc1c(cc2cc3c(c(c2c1O)O)C(=O)C(C(C3)C(C(=O)C(C(C)O)O)OC)OC4CC(C(C(O4)C)O)OC5CC(C(C(O5)C)O)OC6CC(C(C(O6)C)O)(C)O)OC7CC(C(C(O7)C)O)OC8CC(C(C(O8)C)O)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
QWP "SYSTEMATIC NAME" ACDLabs 12.01 (1S)-5-deoxy-1-C-[(2S,3S)-7-{[2,6-dideoxy-3-O-(2,6-dideoxy-beta-D-arabino-hexopyranosyl)-beta-D-arabino-hexopyranosyl]oxy}-3-{[2,6-dideoxy-3-C-methyl-beta-D-ribo-hexopyranosyl-(1->3)-2,6-dideoxy-beta-D-lyxo-hexopyranosyl-(1->3)-2,6-dideoxy-beta-D-arabino-hexopyranosyl]oxy}-5,10-dihydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-1-O-methyl-D-xylulose
QWP "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 (2~{S},3~{S})-2-[(2~{S},4~{R},5~{R},6~{R})-4-[(2~{S},4~{R},5~{S},6~{R})-4-[(2~{S},4~{S},5~{R},6~{R})-4,6-dimethyl-4,5-bis(oxidanyl)oxan-2-yl]oxy-6-methyl-5-oxidanyl-oxan-2-yl]oxy-6-methyl-5-oxidanyl-oxan-2-yl]oxy-3-[(1~{S},3~{S},4~{R})-1-methoxy-3,4-bis(oxidanyl)-2-oxidanylidene-pentyl]-7-methyl-6-[(2~{S},4~{R},5~{R},6~{R})-6-methyl-4-[(2~{S},4~{R},5~{S},6~{R})-6-methyl-4,5-bis(oxidanyl)oxan-2-yl]oxy-5-oxidanyl-oxan-2-yl]oxy-8,9-bis(oxidanyl)-3,4-dihydro-2~{H}-anthracen-1-one
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id QWP
_pdbx_chem_comp_synonyms.name
(1S)-5-deoxy-1-C-[(2S,3S)-7-{[2,6-dideoxy-3-O-(2,6-dideoxy-beta-D-arabino-hexopyranosyl)-beta-D-arabino-hexopyranosyl]oxy}-3-{[2,6-dideoxy-3-C-methyl-beta-D-ribo-hexopyranosyl-(1->3)-2,6-dideoxy-beta-D-lyxo-hexopyranosyl-(1->3)-2,6-dideoxy-beta-D-arabino-hexopyranosyl]oxy}-5,10-dihydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-1-O-methyl-D-xylulose
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
QWP 'Create component' 2020-01-08 RCSB
QWP 'Modify formula' 2020-01-08 RCSB
QWP 'Modify synonyms' 2020-06-11 PDBE
QWP 'Initial release' 2020-11-25 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id QWP
_pdbe_chem_comp_drugbank_details.drugbank_id DB06810
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Plicamycin
_pdbe_chem_comp_drugbank_details.description
"Plicamycin is an antineoplastic antibiotic produced by Streptomyces plicatus. It has been used in the treatment of testicular cancer, Paget's disease of bone, and, rarely, the management of hypercalcemia. The manufacturer discontinued plicamycin in 2000."
_pdbe_chem_comp_drugbank_details.cas_number 18378-89-7
_pdbe_chem_comp_drugbank_details.mechanism_of_action
'Plicamycin is presumed to inhibit cellular and enzymic RNA synthesis by forming a complex with DNA. Plicamycin may also lower calcium serum levels by inhibiting the effect of parathyroid hormone upon osteoclasts or by blocking the hypercalcemic action of pharmacologic doses of vitamin D.'
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
QWP '(1S)-5-deoxy-1-C-[(2S,3S)-7-{[2,6-dideoxy-3-O-(2,6-dideoxy-beta-D-arabino-hexopyranosyl)-beta-D-arabino-hexopyranosyl]oxy}-3-{[2,6-dideoxy-3-C-methyl-beta-D-ribo-hexopyranosyl-(1->3)-2,6-dideoxy-beta-D-lyxo-hexopyranosyl-(1->3)-2,6-dideoxy-beta-D-arabino-hexopyranosyl]oxy}-5,10-dihydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-1-O-methyl-D-xylulose' wwPDB ?
QWP 'Aureolic acid' DrugBank ?
QWP Mithramycin DrugBank ?
QWP Mithramycinum DrugBank ?
QWP Plicamycin DrugBank ?
QWP Plicamycinum DrugBank ?
QWP Mithracin DrugBank 'International brand'
#
_pdbe_chem_comp_drugbank_classification.comp_id QWP
_pdbe_chem_comp_drugbank_classification.drugbank_id DB06810
_pdbe_chem_comp_drugbank_classification.parent Oligosaccharides
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Organooxygen compounds'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic oxygen compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as oligosaccharides. These are carbohydrates made up of 3 to 10 monosaccharide units linked to each other through glycosidic bonds.'
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
QWP CAA C 15.419 -12.009 1
QWP CAB C 14.120 -12.759 2
QWP CAC C 12.821 -13.509 3
QWP OAD O 15.419 -13.509 4
QWP CAE C 12.821 -12.009 5
QWP OAF O 11.522 -12.759 6
QWP CAG C 12.821 -10.509 7
QWP CAH C 11.522 -9.759 8
QWP OAI O 14.120 -9.759 9
QWP CAJ C 15.419 -10.509 10
QWP OAK O 16.718 -9.759 11
QWP CAL C 16.718 -8.259 12
QWP CAM C 15.419 -7.509 13
QWP CAN C 18.017 -7.509 14
QWP OAO O 19.316 -8.259 15
QWP CAP C 18.017 -6.009 16
QWP CAQ C 19.316 -5.259 17
QWP OAR O 16.718 -5.259 18
QWP CAS C 15.419 -6.009 19
QWP OAT O 14.120 -5.259 20
QWP CAU C 14.120 -3.759 21
QWP CAV C 12.821 -3.009 22
QWP CAW C 15.419 -3.009 23
QWP OAX O 16.718 -3.759 24
QWP CAY C 15.419 -1.509 25
QWP CAZ C 16.718 -0.759 26
QWP OBA O 14.120 -0.759 27
QWP CBB C 12.821 -1.509 28
QWP OBC O 11.522 -0.759 29
QWP CBD C 11.522 0.741 30
QWP CBE C 10.172 1.528 31
QWP CBF C 10.190 3.090 32
QWP CBG C 8.867 0.788 33
QWP OBH O 8.856 -0.712 34
QWP CBI C 7.551 -1.452 35
QWP CBJ C 7.574 1.548 36
QWP OBK O 6.269 0.808 37
QWP CBL C 7.585 3.048 38
QWP OBM O 8.890 3.788 39
QWP CBN C 6.292 3.808 40
QWP CBO C 6.304 5.308 41
QWP OBP O 4.987 3.068 42
QWP CBQ C 12.872 1.528 43
QWP OBR O 14.177 0.788 44
QWP CBS C 12.854 3.090 45
QWP CBT C 14.156 3.835 46
QWP OBU O 15.452 3.080 47
QWP CBV C 11.558 3.845 48
QWP CBW C 11.564 5.345 49
QWP CBX C 12.866 6.090 50
QWP CBY C 12.848 7.652 51
QWP CBZ C 14.162 5.335 52
QWP CCA C 15.530 6.090 53
QWP OCB O 16.817 5.320 54
QWP CCC C 15.548 7.652 55
QWP CCD C 16.853 8.392 56
QWP CCE C 14.198 8.439 57
QWP OCF O 14.198 9.939 58
QWP CCG C 12.899 10.689 59
QWP CCH C 11.600 9.939 60
QWP OCI O 12.899 12.189 61
QWP CCJ C 11.600 12.939 62
QWP CCK C 11.600 14.439 63
QWP CCL C 10.301 12.189 64
QWP OCM O 9.002 12.939 65
QWP CCN C 10.301 10.689 66
QWP OCO O 9.002 9.939 67
QWP CCP C 7.702 10.689 68
QWP CCQ C 6.404 9.939 69
QWP OCR O 7.702 12.189 70
QWP CCS C 6.404 12.939 71
QWP CCT C 6.404 14.439 72
QWP CCU C 5.104 12.189 73
QWP OCV O 3.805 12.939 74
QWP CCW C 5.104 10.689 75
QWP OCX O 3.805 9.939 76
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
QWP CAY CAZ SINGLE BEGINDASH 1
QWP CAP CAQ SINGLE BEGINDASH 2
QWP CAW OAX SINGLE BEGINWEDGE 3
QWP CAN OAO SINGLE BEGINDASH 4
QWP CBI OBH SINGLE NONE 5
QWP CAY CAW SINGLE NONE 6
QWP CAY OBA SINGLE NONE 7
QWP CAP OAR SINGLE NONE 8
QWP CAP CAN SINGLE NONE 9
QWP CAW CAU SINGLE NONE 10
QWP OAR CAS SINGLE NONE 11
QWP CAN CAL SINGLE NONE 12
QWP CBL OBM SINGLE BEGINDASH 13
QWP OBA CBB SINGLE NONE 14
QWP CAG CAH SINGLE BEGINWEDGE 15
QWP CBG OBH SINGLE BEGINDASH 16
QWP CAU OAT SINGLE BEGINDASH 17
QWP CAU CAV SINGLE NONE 18
QWP OAI CAG SINGLE NONE 19
QWP OAI CAJ SINGLE NONE 20
QWP CAS OAT SINGLE BEGINDASH 21
QWP CAS CAM SINGLE NONE 22
QWP CAL OAK SINGLE BEGINDASH 23
QWP CAL CAM SINGLE NONE 24
QWP CAJ OAK SINGLE BEGINWEDGE 25
QWP CBL CBJ SINGLE NONE 26
QWP CBL CBN SINGLE NONE 27
QWP CAG CAE SINGLE NONE 28
QWP CBG CBJ SINGLE NONE 29
QWP CBG CBE SINGLE NONE 30
QWP CBB CAV SINGLE NONE 31
QWP CBB OBC SINGLE BEGINDASH 32
QWP CAE OAF SINGLE BEGINDASH 33
QWP CAE CAB SINGLE NONE 34
QWP CBJ OBK DOUBLE NONE 35
QWP CAJ CAA SINGLE NONE 36
QWP CAA CAB SINGLE NONE 37
QWP OBP CBN SINGLE NONE 38
QWP CBD OBC SINGLE BEGINWEDGE 39
QWP CBN CBO SINGLE BEGINDASH 40
QWP CAB CAC SINGLE BEGINWEDGE 41
QWP CAB OAD SINGLE NONE 42
QWP CBD CBE SINGLE NONE 43
QWP CBD CBQ SINGLE NONE 44
QWP CBE CBF SINGLE BEGINDASH 45
QWP CBF CBV SINGLE NONE 46
QWP CBQ OBR DOUBLE NONE 47
QWP CBQ CBS SINGLE NONE 48
QWP CBV CBS DOUBLE NONE 49
QWP CBV CBW SINGLE NONE 50
QWP CBS CBT SINGLE NONE 51
QWP CBW CBX DOUBLE NONE 52
QWP CBT OBU SINGLE NONE 53
QWP CBT CBZ DOUBLE NONE 54
QWP CBX CBZ SINGLE NONE 55
QWP CBX CBY SINGLE NONE 56
QWP CBZ CCA SINGLE NONE 57
QWP CCJ CCK SINGLE BEGINWEDGE 58
QWP CBY CCE DOUBLE NONE 59
QWP CCA OCB SINGLE NONE 60
QWP CCA CCC DOUBLE NONE 61
QWP OCI CCJ SINGLE NONE 62
QWP OCI CCG SINGLE NONE 63
QWP CCJ CCL SINGLE NONE 64
QWP CCE CCC SINGLE NONE 65
QWP CCE OCF SINGLE NONE 66
QWP CCC CCD SINGLE NONE 67
QWP CCG OCF SINGLE BEGINWEDGE 68
QWP CCG CCH SINGLE NONE 69
QWP CCL OCM SINGLE BEGINDASH 70
QWP CCL CCN SINGLE NONE 71
QWP CCH CCN SINGLE NONE 72
QWP CCN OCO SINGLE BEGINWEDGE 73
QWP CCP OCO SINGLE BEGINWEDGE 74
QWP CCP OCR SINGLE NONE 75
QWP CCP CCQ SINGLE NONE 76
QWP OCR CCS SINGLE NONE 77
QWP CCS CCT SINGLE BEGINWEDGE 78
QWP CCS CCU SINGLE NONE 79
QWP CCQ CCW SINGLE NONE 80
QWP CCW CCU SINGLE NONE 81
QWP CCW OCX SINGLE BEGINWEDGE 82
QWP CCU OCV SINGLE BEGINDASH 83
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
QWP MurckoScaffold S1 scaffold 'O=C1c2cc3ccc(O[C@H]4C[C@@H](O[C@H]5CCCCO5)CCO4)cc3cc2CC[C@@H]1O[C@H]1C[C@@H](O[C@H]2C[C@@H](O[C@H]3CCCCO3)CCO2)CCO1' InChI=1S/C39H52O11/c40-39-32-21-25-7-9-28(48-36-22-29(11-16-43-36)46-34-5-1-3-14-41-34)20-27(25)19-26(32)8-10-33(39)50-38-24-31(13-18-45-38)49-37-23-30(12-17-44-37)47-35-6-2-4-15-42-35/h7,9,19-21,29-31,33-38H,1-6,8,10-18,22-24H2/t29-,30-,31-,33-,34-,35-,36-,37-,38-/m0/s1 PHOMLCSOPYJGEZ-OPYZRBIESA-N
QWP napthalene F1 fragment c1ccc2ccccc2c1 InChI=1S/C10H8/c1-2-6-10-8-4-3-7-9(10)5-1/h1-8H UFWIBTONFRDIAS-UHFFFAOYSA-N
QWP phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
QWP pyranose F3 fragment OC1CCCCO1 InChI=1S/C5H10O2/c6-5-3-1-2-4-7-5/h5-6H,1-4H2 CELWCAITJAEQNL-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
QWP CAA S1 1
QWP CAB S1 1
QWP CAE S1 1
QWP CAG S1 1
QWP OAI S1 1
QWP CAJ S1 1
QWP OAK S1 1
QWP CAL S1 1
QWP CAM S1 1
QWP CAN S1 1
QWP CAP S1 1
QWP OAR S1 1
QWP CAS S1 1
QWP OAT S1 1
QWP CAU S1 1
QWP CAV S1 1
QWP CAW S1 1
QWP CAY S1 1
QWP OBA S1 1
QWP CBB S1 1
QWP OBC S1 1
QWP CBD S1 1
QWP CBE S1 1
QWP CBF S1 1
QWP CBQ S1 1
QWP OBR S1 1
QWP CBS S1 1
QWP CBT S1 1
QWP CBV S1 1
QWP CBW S1 1
QWP CBX S1 1
QWP CBY S1 1
QWP CBZ S1 1
QWP CCA S1 1
QWP CCC S1 1
QWP CCE S1 1
QWP OCF S1 1
QWP CCG S1 1
QWP CCH S1 1
QWP OCI S1 1
QWP CCJ S1 1
QWP CCL S1 1
QWP CCN S1 1
QWP OCO S1 1
QWP CCP S1 1
QWP CCQ S1 1
QWP OCR S1 1
QWP CCS S1 1
QWP CCU S1 1
QWP CCW S1 1
QWP CBS F1 1
QWP CBV F1 1
QWP CBW F1 1
QWP CBX F1 1
QWP CBZ F1 1
QWP CBT F1 1
QWP CCA F1 1
QWP CCC F1 1
QWP CCE F1 1
QWP CBY F1 1
QWP CBS F2 1
QWP CBV F2 1
QWP CBW F2 1
QWP CBX F2 1
QWP CBZ F2 1
QWP CBT F2 1
QWP CBX F2 2
QWP CBZ F2 2
QWP CCA F2 2
QWP CCC F2 2
QWP CCE F2 2
QWP CBY F2 2
QWP CAE F3 1
QWP CAG F3 1
QWP OAI F3 1
QWP CAJ F3 1
QWP CAA F3 1
QWP CAB F3 1
QWP OAK F3 1
QWP CAN F3 2
QWP CAP F3 2
QWP OAR F3 2
QWP CAS F3 2
QWP CAM F3 2
QWP CAL F3 2
QWP OAT F3 2
QWP CAW F3 3
QWP CAY F3 3
QWP OBA F3 3
QWP CBB F3 3
QWP CAV F3 3
QWP CAU F3 3
QWP OBC F3 3
QWP CCL F3 4
QWP CCJ F3 4
QWP OCI F3 4
QWP CCG F3 4
QWP CCH F3 4
QWP CCN F3 4
QWP OCF F3 4
QWP CCU F3 5
QWP CCS F3 5
QWP OCR F3 5
QWP CCP F3 5
QWP CCQ F3 5
QWP CCW F3 5
QWP OCO F3 5
#
_pdbe_chem_comp_rdkit_properties.comp_id QWP
_pdbe_chem_comp_rdkit_properties.exactmw 1084.473
_pdbe_chem_comp_rdkit_properties.amw 1085.156
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 24
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 11
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 35
_pdbe_chem_comp_rdkit_properties.NumHBD 11
_pdbe_chem_comp_rdkit_properties.NumHBA 24
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 76
_pdbe_chem_comp_rdkit_properties.NumAtoms 152
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 24
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.769
_pdbe_chem_comp_rdkit_properties.NumRings 8
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 6
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 5
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 5
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 5
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 5
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 25
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 546.445
_pdbe_chem_comp_rdkit_properties.tpsa 358.200
_pdbe_chem_comp_rdkit_properties.CrippenClogP -2.229
_pdbe_chem_comp_rdkit_properties.CrippenMR 253.741
_pdbe_chem_comp_rdkit_properties.chi0v 35.798
_pdbe_chem_comp_rdkit_properties.chi1v 19.144
_pdbe_chem_comp_rdkit_properties.chi2v 9.246
_pdbe_chem_comp_rdkit_properties.chi3v 9.246
_pdbe_chem_comp_rdkit_properties.chi4v 5.891
_pdbe_chem_comp_rdkit_properties.chi0n 111.798
_pdbe_chem_comp_rdkit_properties.chi1n 56.135
_pdbe_chem_comp_rdkit_properties.chi2n 9.246
_pdbe_chem_comp_rdkit_properties.chi3n 9.246
_pdbe_chem_comp_rdkit_properties.chi4n 5.891
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.320
_pdbe_chem_comp_rdkit_properties.kappa1 15.408
_pdbe_chem_comp_rdkit_properties.kappa2 23.409
_pdbe_chem_comp_rdkit_properties.kappa3 11.919
_pdbe_chem_comp_rdkit_properties.Phi 4.746
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
QWP UniChem DrugBank DB06810
QWP UniChem 'Guide to Pharmacology' 8394
QWP UniChem 'KEGG LIGAND' C12389
QWP UniChem ChEBI 31856
QWP UniChem fdasrs NIJ123W41V
QWP UniChem SureChEMBL SCHEMBL4517
QWP UniChem HMDB HMDB0015682
QWP UniChem NMRShiftDB 70005737
QWP UniChem DrugCentral 2223
QWP UniChem MetaboLights MTBLC31856
QWP UniChem BRENDA 146780
QWP UniChem MedChemExpress HY-A0122
QWP UniChem 'Probes And Drugs' PD009220
QWP UniChem ACTor 97666-60-9
QWP UniChem 'PubChem TPHARMA' 15735331
QWP UniChem PubChem 163659
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
QWP CAA -9.441 -2.351 2.751 ETKDGv3 1
QWP CAB -10.562 -2.363 3.799 ETKDGv3 2
QWP CAC -9.938 -2.367 5.212 ETKDGv3 3
QWP OAD -11.330 -3.532 3.606 ETKDGv3 4
QWP CAE -11.424 -1.087 3.584 ETKDGv3 5
QWP OAF -12.637 -1.167 4.295 ETKDGv3 6
QWP CAG -11.668 -0.788 2.070 ETKDGv3 7
QWP CAH -10.968 0.497 1.592 ETKDGv3 8
QWP OAI -11.372 -1.903 1.238 ETKDGv3 9
QWP CAJ -10.019 -2.342 1.311 ETKDGv3 10
QWP OAK -9.225 -1.546 0.449 ETKDGv3 11
QWP CAL -8.046 -2.213 0.021 ETKDGv3 12
QWP CAM -6.846 -1.268 0.222 ETKDGv3 13
QWP CAN -8.173 -2.569 -1.469 ETKDGv3 14
QWP OAO -9.248 -3.455 -1.657 ETKDGv3 15
QWP CAP -8.308 -1.267 -2.334 ETKDGv3 16
QWP CAQ -9.746 -1.015 -2.801 ETKDGv3 17
QWP OAR -7.873 -0.104 -1.640 ETKDGv3 18
QWP CAS -6.636 -0.333 -0.988 ETKDGv3 19
QWP OAT -6.119 0.897 -0.521 ETKDGv3 20
QWP CAU -5.577 1.670 -1.582 ETKDGv3 21
QWP CAV -4.044 1.488 -1.622 ETKDGv3 22
QWP CAW -5.934 3.148 -1.338 ETKDGv3 23
QWP OAX -5.546 3.919 -2.448 ETKDGv3 24
QWP CAY -5.212 3.687 -0.061 ETKDGv3 25
QWP CAZ -6.203 3.872 1.090 ETKDGv3 26
QWP OBA -4.173 2.826 0.388 ETKDGv3 27
QWP CBB -3.316 2.472 -0.681 ETKDGv3 28
QWP OBC -2.167 1.849 -0.129 ETKDGv3 29
QWP CBD -0.985 2.061 -0.892 ETKDGv3 30
QWP CBE 0.095 2.691 0.027 ETKDGv3 31
QWP CBF 1.491 2.566 -0.616 ETKDGv3 32
QWP CBG -0.219 4.153 0.478 ETKDGv3 33
QWP OBH -1.462 4.189 1.164 ETKDGv3 34
QWP CBI -1.279 4.136 2.562 ETKDGv3 35
QWP CBJ -0.222 5.158 -0.669 ETKDGv3 36
QWP OBK 0.842 5.431 -1.206 ETKDGv3 37
QWP CBL -1.462 5.932 -1.093 ETKDGv3 38
QWP OBM -1.349 7.280 -0.705 ETKDGv3 39
QWP CBN -1.734 5.806 -2.612 ETKDGv3 40
QWP CBO -3.058 6.480 -2.990 ETKDGv3 41
QWP OBP -0.686 6.384 -3.348 ETKDGv3 42
QWP CBQ -0.524 0.722 -1.433 ETKDGv3 43
QWP OBR -1.343 0.022 -2.085 ETKDGv3 44
QWP CBS 0.881 0.253 -1.274 ETKDGv3 45
QWP CBT 1.253 -1.169 -1.552 ETKDGv3 46
QWP OBU 0.220 -2.085 -1.773 ETKDGv3 47
QWP CBV 1.829 1.120 -0.864 ETKDGv3 48
QWP CBW 3.230 0.675 -0.732 ETKDGv3 49
QWP CBX 3.576 -0.580 -1.046 ETKDGv3 50
QWP CBY 4.959 -1.039 -0.855 ETKDGv3 51
QWP CBZ 2.561 -1.542 -1.537 ETKDGv3 52
QWP CCA 3.057 -2.866 -2.020 ETKDGv3 53
QWP OCB 2.200 -3.675 -2.776 ETKDGv3 54
QWP CCC 4.342 -3.242 -1.783 ETKDGv3 55
QWP CCD 4.829 -4.606 -2.215 ETKDGv3 56
QWP CCE 5.325 -2.294 -1.173 ETKDGv3 57
QWP OCF 6.641 -2.749 -0.963 ETKDGv3 58
QWP CCG 7.724 -1.976 -0.443 ETKDGv3 59
QWP CCH 8.923 -2.906 -0.238 ETKDGv3 60
QWP OCI 8.027 -0.934 -1.358 ETKDGv3 61
QWP CCJ 9.266 -0.265 -1.120 ETKDGv3 62
QWP CCK 10.177 -0.469 -2.335 ETKDGv3 63
QWP CCL 9.997 -0.626 0.205 ETKDGv3 64
QWP OCM 9.304 -0.039 1.278 ETKDGv3 65
QWP CCN 10.102 -2.160 0.412 ETKDGv3 66
QWP OCO 11.312 -2.632 -0.166 ETKDGv3 67
QWP CCP 12.261 -2.990 0.821 ETKDGv3 68
QWP CCQ 13.493 -3.604 0.122 ETKDGv3 69
QWP OCR 12.639 -1.841 1.561 ETKDGv3 70
QWP CCS 13.393 -2.219 2.702 ETKDGv3 71
QWP CCT 13.773 -0.949 3.463 ETKDGv3 72
QWP CCU 14.665 -3.043 2.315 ETKDGv3 73
QWP OCV 14.642 -4.314 2.919 ETKDGv3 74
QWP CCW 14.817 -3.172 0.781 ETKDGv3 75
QWP OCX 15.214 -1.937 0.240 ETKDGv3 76
QWP H1 -8.801 -1.454 2.904 ETKDGv3 77
QWP H2 -8.791 -3.244 2.883 ETKDGv3 78
QWP H3 -9.260 -1.497 5.350 ETKDGv3 79
QWP H4 -10.731 -2.316 5.989 ETKDGv3 80
QWP H5 -9.353 -3.298 5.371 ETKDGv3 81
QWP H6 -11.917 -3.658 4.397 ETKDGv3 82
QWP H7 -10.867 -0.226 4.018 ETKDGv3 83
QWP H8 -13.226 -1.814 3.825 ETKDGv3 84
QWP H9 -12.753 -0.584 1.931 ETKDGv3 85
QWP H10 -11.421 1.380 2.091 ETKDGv3 86
QWP H11 -9.885 0.485 1.835 ETKDGv3 87
QWP H12 -11.093 0.612 0.494 ETKDGv3 88
QWP H13 -10.043 -3.398 0.954 ETKDGv3 89
QWP H14 -7.831 -3.147 0.595 ETKDGv3 90
QWP H15 -5.921 -1.866 0.375 ETKDGv3 91
QWP H16 -7.005 -0.673 1.149 ETKDGv3 92
QWP H17 -7.227 -3.085 -1.761 ETKDGv3 93
QWP H18 -9.099 -3.903 -2.531 ETKDGv3 94
QWP H19 -7.691 -1.388 -3.253 ETKDGv3 95
QWP H20 -9.795 -0.057 -3.363 ETKDGv3 96
QWP H21 -10.087 -1.825 -3.480 ETKDGv3 97
QWP H22 -10.433 -0.948 -1.930 ETKDGv3 98
QWP H23 -5.904 -0.823 -1.681 ETKDGv3 99
QWP H24 -5.997 1.385 -2.578 ETKDGv3 100
QWP H25 -3.678 1.648 -2.660 ETKDGv3 101
QWP H26 -3.802 0.440 -1.342 ETKDGv3 102
QWP H27 -7.042 3.227 -1.218 ETKDGv3 103
QWP H28 -6.210 3.749 -3.167 ETKDGv3 104
QWP H29 -4.784 4.694 -0.268 ETKDGv3 105
QWP H30 -6.992 4.600 0.807 ETKDGv3 106
QWP H31 -6.678 2.902 1.353 ETKDGv3 107
QWP H32 -5.672 4.261 1.985 ETKDGv3 108
QWP H33 -3.053 3.396 -1.248 ETKDGv3 109
QWP H34 -1.117 2.720 -1.779 ETKDGv3 110
QWP H35 0.127 2.079 0.958 ETKDGv3 111
QWP H36 1.522 3.089 -1.594 ETKDGv3 112
QWP H37 2.251 3.023 0.056 ETKDGv3 113
QWP H38 0.621 4.481 1.139 ETKDGv3 114
QWP H39 -0.782 5.061 2.928 ETKDGv3 115
QWP H40 -0.699 3.237 2.864 ETKDGv3 116
QWP H41 -2.276 4.073 3.046 ETKDGv3 117
QWP H42 -2.350 5.524 -0.571 ETKDGv3 118
QWP H43 -0.558 7.667 -1.162 ETKDGv3 119
QWP H44 -1.816 4.724 -2.865 ETKDGv3 120
QWP H45 -3.893 6.057 -2.393 ETKDGv3 121
QWP H46 -3.275 6.308 -4.065 ETKDGv3 122
QWP H47 -3.003 7.575 -2.809 ETKDGv3 123
QWP H48 -0.747 6.021 -4.270 ETKDGv3 124
QWP H49 0.304 -3.076 -1.594 ETKDGv3 125
QWP H50 3.976 1.373 -0.373 ETKDGv3 126
QWP H51 5.673 -0.345 -0.432 ETKDGv3 127
QWP H52 2.470 -4.551 -3.205 ETKDGv3 128
QWP H53 5.827 -4.850 -1.800 ETKDGv3 129
QWP H54 4.136 -5.393 -1.851 ETKDGv3 130
QWP H55 4.896 -4.647 -3.322 ETKDGv3 131
QWP H56 7.413 -1.555 0.539 ETKDGv3 132
QWP H57 8.627 -3.764 0.404 ETKDGv3 133
QWP H58 9.222 -3.319 -1.227 ETKDGv3 134
QWP H59 9.045 0.825 -1.081 ETKDGv3 135
QWP H60 10.427 -1.542 -2.466 ETKDGv3 136
QWP H61 9.661 -0.116 -3.253 ETKDGv3 137
QWP H62 11.117 0.111 -2.220 ETKDGv3 138
QWP H63 11.022 -0.186 0.171 ETKDGv3 139
QWP H64 9.933 -0.009 2.047 ETKDGv3 140
QWP H65 10.038 -2.362 1.511 ETKDGv3 141
QWP H66 11.817 -3.772 1.486 ETKDGv3 142
QWP H67 13.517 -3.315 -0.953 ETKDGv3 143
QWP H68 13.410 -4.712 0.150 ETKDGv3 144
QWP H69 12.747 -2.811 3.391 ETKDGv3 145
QWP H70 14.412 -0.296 2.830 ETKDGv3 146
QWP H71 12.856 -0.387 3.741 ETKDGv3 147
QWP H72 14.323 -1.207 4.393 ETKDGv3 148
QWP H73 15.580 -2.536 2.694 ETKDGv3 149
QWP H74 13.835 -4.793 2.598 ETKDGv3 150
QWP H75 15.591 -3.940 0.548 ETKDGv3 151
QWP H76 16.182 -1.834 0.435 ETKDGv3 152
#